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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019138 ID=TCONS_00019138|Name=TCONS_00019138|organism=Clytia hemisphaerica|type=transcript|length=895bp
GTGACGAAaaacttggcacaaaaaggaaacccaccggggtgttttgaaac
cacaatcgatttgcaagtgctctaaagtaggttcgaagNATGAGGGTGAA
AGGAATTGTCTTGGGAAAGAATTCATCTACAAATCGTGTCCAGTGTTTTC
TTTGAATATGTACTTTGAAGGACCAGAAGTTTGGTTGGATGTCAAAGTCT
CCTTTTGCGTTGATTGGAGTAGAGGTTGGCGTTGCTTTCAGTTTCATTTT
CTGGTCGATAATAAAGAAATGATTATTATTGCTATGTTGTGTAGCATAGT
ATAACACTTCATCGGAGAAGATGACGTAATCTCTCCATTTCAATACGAGA
TCAGCTTTCGATTCACCATGTTGGGCCATATAGTAATGAGGCCATATGAG
TGATAACATGTTGTTTTTCTCAACAGCGAATCTTTTTGCATTACGGGAAC
CAACATTCACTAATCCATTGTAATCTTGTTGTTTTTTGGATGAACATGGA
TAGAATCTACCACTGGTGAATACTGAGTATATGCCGTGAgcgtttttgaa
gaaaaaatgaggGTCAAGAAGTGACAACCATTTTGAAACTTGGTAAGATC
CTTTGTATTGACCAAGGtaatagtattttttttcatcgCCTGAGCTTCTG
AATAACCCATTTAGATGACAATATATCTTTGGCTTGAAGCTGGAGATTCC
ATTAATTCTTAGGTTTTCTGGGAATATGATTCTTGTTGAATGTGTGATTC
CTAAATCATAACCATTGGGTTTTGAAGAGTGACAAACATATTCATCTGGT
TTTGGGAGGACAGCTTTTAATGCCGATTGGATGTGAGCATCTGTTTCTGT
GTGTACCAAGTCAGTCACTGCTTTGGATAAAGTTGTCACTGGTCG Run BLAST on NCBI protein sequence of TCONS_00019138-protein >TCONS_00019138-protein ID=TCONS_00019138-protein|Name=TCONS_00019138-protein|organism=Clytia hemisphaerica|type=polypeptide|length=298bp
RPVTTLSKAVTDLVHTETDAHIQSALKAVLPKPDEYVCHSSKPNGYDLGI
THSTRIIFPENLRINGISSFKPKIYCHLNGLFRSSGDEKKYYYLGQYKGS
YQVSKWLSLLDPHFFFKNAHGIYSVFTSGRFYPCSSKKQQDYNGLVNVGS
RNAKRFAVEKNNMLSLIWPHYYMAQHGESKADLVLKWRDYVIFSDEVLYY
ATQHSNNNHFFIIDQKMKLKATPTSTPINAKGDFDIQPNFWSFKVHIQRK
HWTRFVDEFFPKTIPFTLXLRTYFRALANRLWFQNTPVGFLFVPSFSS Run BLAST on NCBI transcript from alignment at sc0000319:191144..192038 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019138 ID=TCONS_00019138|Name=TCONS_00019138|organism=Clytia hemisphaerica|type=transcript|length=895bp|location=Sequence derived from alignment at sc0000319:191144..192038 (Clytia hemisphaerica)
CGACCAGTGACAACTTTATCCAAAGCAGTGACTGACTTGGTACACACAGA
AACAGATGCTCACATCCAATCGGCATTAAAAGCTGTCCTCCCAAAACCAG
ATGAATATGTTTGTCACTCTTCAAAACCCAATGGTTATGATTTAGGAATC
ACACATTCAACAAGAATCATATTCCCAGAAAACCTAAGAATTAATGGAAT
CTCCAGCTTCAAGCCAAAGATATATTGTCATCTAAATGGGTTATTCAGAA
GCTCAGGcgatgaaaaaaaatactattaCCTTGGTCAATACAAAGGATCT
TACCAAGTTTCAAAATGGTTGTCACTTCTTGACcctcattttttcttcaa
aaacgcTCACGGCATATACTCAGTATTCACCAGTGGTAGATTCTATCCAT
GTTCATCCAAAAAACAACAAGATTACAATGGATTAGTGAATGTTGGTTCC
CGTAATGCAAAAAGATTCGCTGTTGAGAAAAACAACATGTTATCACTCAT
ATGGCCTCATTACTATATGGCCCAACATGGTGAATCGAAAGCTGATCTCG
TATTGAAATGGAGAGATTACGTCATCTTCTCCGATGAAGTGTTATACTAT
GCTACACAACATAGCAATAATAATCATTTCTTTATTATCGACCAGAAAAT
GAAACTGAAAGCAACGCCAACCTCTACTCCAATCAACGCAAAAGGAGACT
TTGACATCCAACCAAACTTCTGGTCCTTCAAAGTACATATTCAAAGAAAA
CACTGGACACGATTTGTAGATGAATTCTTTCCCAAGACAATTCCTTTCAC
CCTCATNcttcgaacctactttagagcacttgcaaatcgattgtggtttc
aaaacaccccggtgggtttcctttttgtgccaagtttTTCGTCAC Coding sequence (CDS) from alignment at sc0000319:191144..192038 >TCONS_00019138 ID=TCONS_00019138|Name=TCONS_00019138|organism=Clytia hemisphaerica|type=CDS|length=894bp|location=Sequence derived from alignment at sc0000319:191144..192038 (Clytia hemisphaerica)
CGACCAGTGACAACTTTATCCAAAGCAGTGACTGACTTGGTACACACAGA
AACAGATGCTCACATCCAATCGGCATTAAAAGCTGTCCTCCCAAAACCAG
ATGAATATGTTTGTCACTCTTCAAAACCCAATGGTTATGATTTAGGAATC
ACACATTCAACAAGAATCATATTCCCAGAAAACCTAAGAATTAATGGAAT
CTCCAGCTTCAAGCCAAAGATATATTGTCATCTAAATGGGTTATTCAGAA
GCTCAGGcgatgaaaaaaaatactattaCCTTGGTCAATACAAAGGATCT
TACCAAGTTTCAAAATGGTTGTCACTTCTTGACcctcattttttcttcaa
aaacgcTCACGGCATATACTCAGTATTCACCAGTGGTAGATTCTATCCAT
GTTCATCCAAAAAACAACAAGATTACAATGGATTAGTGAATGTTGGTTCC
CGTAATGCAAAAAGATTCGCTGTTGAGAAAAACAACATGTTATCACTCAT
ATGGCCTCATTACTATATGGCCCAACATGGTGAATCGAAAGCTGATCTCG
TATTGAAATGGAGAGATTACGTCATCTTCTCCGATGAAGTGTTATACTAT
GCTACACAACATAGCAATAATAATCATTTCTTTATTATCGACCAGAAAAT
GAAACTGAAAGCAACGCCAACCTCTACTCCAATCAACGCAAAAGGAGACT
TTGACATCCAACCAAACTTCTGGTCCTTCAAAGTACATATTCAAAGAAAA
CACTGGACACGATTTGTAGATGAATTCTTTCCCAAGACAATTCCTTTCAC
CCTCATNcttcgaacctactttagagcacttgcaaatcgattgtggtttc
aaaacaccccggtgggtttcctttttgtgccaagtttTTCGTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019138-exon-sc0000319-1491911889:191144..192038 | TCONS_00019138-exon-sc0000319-1491911889:191144..192038 | Clytia hemisphaerica | exon |
| TCONS_00019138-exon-sc0000319-1510915933:191144..192038 | TCONS_00019138-exon-sc0000319-1510915933:191144..192038 | Clytia hemisphaerica | exon |
| TCONS_00019138-exon-sc0000319-1575043694:191144..192038 | TCONS_00019138-exon-sc0000319-1575043694:191144..192038 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000319 | supercontig | sc0000319:191144..192038 . |
Blast
The following BLAST results are available for this feature:
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