TCONS_00019137 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019137
Unique NameTCONS_00019137
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length85

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019137 ID=TCONS_00019137|Name=TCONS_00019137|organism=Clytia hemisphaerica|type=transcript|length=85bp
TGAAATACTTGGCATTGCAACAAACTTCCCACGATCAAAAATTTAGTATA
AAAATTCTGCAATTTGGGACAGTTTATCATTCTAA
Run BLAST on NCBI

transcript from alignment at sc0000319:184254..184338

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019137 ID=TCONS_00019137|Name=TCONS_00019137|organism=Clytia hemisphaerica|type=transcript|length=85bp|location=Sequence derived from alignment at sc0000319:184254..184338 (Clytia hemisphaerica)
TTAGAATGATAAACTGTCCCAAATTGCAGAATTTTTATACTAAATTTTTG
ATCGTGGGAAGTTTGTTGCAATGCCAAGTATTTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010734XLOC_010734Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019137-exon-sc0000319-1491911889:184254..184338TCONS_00019137-exon-sc0000319-1491911889:184254..184338Clytia hemisphaericaexon
TCONS_00019137-exon-sc0000319-1510915933:184254..184338TCONS_00019137-exon-sc0000319-1510915933:184254..184338Clytia hemisphaericaexon
TCONS_00019137-exon-sc0000319-1575043694:184254..184338TCONS_00019137-exon-sc0000319-1575043694:184254..184338Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000319supercontigsc0000319:184254..184338 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00019137 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top