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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019135 ID=TCONS_00019135|Name=TCONS_00019135|organism=Clytia hemisphaerica|type=transcript|length=1534bp
GCTGGATATGCTGACATCATATCAAGTTTTGTCTGTGCAGATTTTTATCC
tcgaaagaaaatatttgtttgtaCTGCGCTAGTGGAAAAGTCTAGATGCT
TTTTGATCACTTACAATTTTAACTTTAATTTGTTTCTCTGGTGTCTTTGA
TTTTTATTCATGCCATTTTTAAAAGGAGGCTCTGAAACATCCATGGCTAG
CAGCAACTCGTCAGGGAGCAATAACACCACTGCACAAGCATGTTGTTTTC
ACATGGCTTTCAAGATTTTTAGCAGTTTACTATTAATGTTGGTTGGATGT
TTGGCTATCCTGGAAAATATGTTGTTCTGCTACGTTATATACAGTAAAAG
ACATCTCCAAAGGCGCTCCATGGTTCTTTTAGTTAGTTTATCGATCAGTG
ATATATTCATCAGCTTGCTGGTGCCTGCTATtgaaactattttctttata
aCTTTCCCAGAATGGCCTCTTGGAAGTGTAGGATCCAATCTTTATAATTG
TGTTTGGATGTTTTCTGTCGTTTCTCCCTTTACTACTATAACGGTGATAA
CTATAGAAAGATATATGGTAATTTGTTGGAAAACTATATACGAGAAAATA
TGTACTCCTACATTCATGGGAATAATTGTATCATCAATTTGGGCATATTC
ATTTATTTGGGTCTTTTGTATGGGGTATTACATGAAACCGATCCACGTTC
GAAAATATGTCTGGAATGTGAACCATTGGCTATATTATTCCTTGATTTGG
TTTCACGTTATCGTACCACTCACAATAATACCTGTCCTCTATTACCGTAT
TTTGAAGCAAGTTAAGTTGACGCGTGGTGGGCTAACAGATAGTACTACTT
GTTTGATACACAATGGAAAAGACAACGATATCCGGTTGACCAAAACAGTT
ACTCGGGTTATTATTGTTCTGTATGGCGTATGGCTGCCAGTTTTGGCGTT
AGAAATGATATATACAAACTTCTATTCTGAGTGTATGATCAAGAAACTAG
ACTTGATTAGTGTTACACTAGCCTGCAGTAACTGTTGCTTGAACCCAATA
TTGTATTCTTACAAGAACTCTGAGATTAAGGAATACATCAGAGAACGAAA
ACAAAAGTTGAAGAAATGGTTTTGCTAAGAAAACTTTGTAAAACATCAGT
TGATTCGATTGCAGAGCTAGATACATCCGATTCAAAgttggaaaattgat
ttttttgccAGTGTGTAAATCTATGGATTAGCACAACGATTCTTCAATTT
GTGATAgagctttgaaattttgcagaaacatttttttatggAATATAGAA
TATCTCTTTGAGAGAGAGACATTTTTCAAGCTTGCCATGGTCCCACTTCT
ATGAGACAGATTTCTTaaacaaagtaaaaataaaatttgtaaatttgatg
ttttgatgtttttcagcctttttgaattattttagtacaaaaaatgagaa
ttttagaagaaaaatCACAATTTCTAACTCATACTGGGCATTATCCAATA
ACCttgacattggcacttaaagggttaagaagGA Run BLAST on NCBI protein sequence of TCONS_00019135-protein >TCONS_00019135-protein ID=TCONS_00019135-protein|Name=TCONS_00019135-protein|organism=Clytia hemisphaerica|type=polypeptide|length=322bp
MPFLKGGSETSMASSNSSGSNNTTAQACCFHMAFKIFSSLLLMLVGCLAI
LENMLFCYVIYSKRHLQRRSMVLLVSLSISDIFISLLVPAIETIFFITFP
EWPLGSVGSNLYNCVWMFSVVSPFTTITVITIERYMVICWKTIYEKICTP
TFMGIIVSSIWAYSFIWVFCMGYYMKPIHVRKYVWNVNHWLYYSLIWFHV
IVPLTIIPVLYYRILKQVKLTRGGLTDSTTCLIHNGKDNDIRLTKTVTRV
IIVLYGVWLPVLALEMIYTNFYSECMIKKLDLISVTLACSNCCLNPILYS
YKNSEIKEYIRERKQKLKKWFC Run BLAST on NCBI transcript from alignment at sc0000319:178416..179949 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019135 ID=TCONS_00019135|Name=TCONS_00019135|organism=Clytia hemisphaerica|type=transcript|length=1534bp|location=Sequence derived from alignment at sc0000319:178416..179949 (Clytia hemisphaerica)
TCcttcttaaccctttaagtgccaatgtcaaGGTTATTGGATAATGCCCA
GTATGAGTTAGAAATTGTGatttttcttctaaaattctcattttttgtac
taaaataattcaaaaaggctgaaaaacatcaaaacatcaaatttacaaat
tttatttttactttgtttAAGAAATCTGTCTCATAGAAGTGGGACCATGG
CAAGCTTGAAAAATGTCTCTCTCTCAAAGAGATATTCTATATTccataaa
aaaatgtttctgcaaaatttcaaagctcTATCACAAATTGAAGAATCGTT
GTGCTAATCCATAGATTTACACACTggcaaaaaaatcaattttccaacTT
TGAATCGGATGTATCTAGCTCTGCAATCGAATCAACTGATGTTTTACAAA
GTTTTCTTAGCAAAACCATTTCTTCAACTTTTGTTTTCGTTCTCTGATGT
ATTCCTTAATCTCAGAGTTCTTGTAAGAATACAATATTGGGTTCAAGCAA
CAGTTACTGCAGGCTAGTGTAACACTAATCAAGTCTAGTTTCTTGATCAT
ACACTCAGAATAGAAGTTTGTATATATCATTTCTAACGCCAAAACTGGCA
GCCATACGCCATACAGAACAATAATAACCCGAGTAACTGTTTTGGTCAAC
CGGATATCGTTGTCTTTTCCATTGTGTATCAAACAAGTAGTACTATCTGT
TAGCCCACCACGCGTCAACTTAACTTGCTTCAAAATACGGTAATAGAGGA
CAGGTATTATTGTGAGTGGTACGATAACGTGAAACCAAATCAAGGAATAA
TATAGCCAATGGTTCACATTCCAGACATATTTTCGAACGTGGATCGGTTT
CATGTAATACCCCATACAAAAGACCCAAATAAATGAATATGCCCAAATTG
ATGATACAATTATTCCCATGAATGTAGGAGTACATATTTTCTCGTATATA
GTTTTCCAACAAATTACCATATATCTTTCTATAGTTATCACCGTTATAGT
AGTAAAGGGAGAAACGACAGAAAACATCCAAACACAATTATAAAGATTGG
ATCCTACACTTCCAAGAGGCCATTCTGGGAAAGttataaagaaaatagtt
tcaATAGCAGGCACCAGCAAGCTGATGAATATATCACTGATCGATAAACT
AACTAAAAGAACCATGGAGCGCCTTTGGAGATGTCTTTTACTGTATATAA
CGTAGCAGAACAACATATTTTCCAGGATAGCCAAACATCCAACCAACATT
AATAGTAAACTGCTAAAAATCTTGAAAGCCATGTGAAAACAACATGCTTG
TGCAGTGGTGTTATTGCTCCCTGACGAGTTGCTGCTAGCCATGGATGTTT
CAGAGCCTCCTTTTAAAAATGGCATGAATAAAAATCAAAGACACCAGAGA
AACAAATTAAAGTTAAAATTGTAAGTGATCAAAAAGCATCTAGACTTTTC
CACTAGCGCAGtacaaacaaatattttctttcgaGGATAAAAATCTGCAC
AGACAAAACTTGATATGATGTCAGCATATCCAGC Coding sequence (CDS) from alignment at sc0000319:178416..179949 >TCONS_00019135 ID=TCONS_00019135|Name=TCONS_00019135|organism=Clytia hemisphaerica|type=CDS|length=969bp|location=Sequence derived from alignment at sc0000319:178416..179949 (Clytia hemisphaerica)
TTAGCAAAACCATTTCTTCAACTTTTGTTTTCGTTCTCTGATGTATTCCT
TAATCTCAGAGTTCTTGTAAGAATACAATATTGGGTTCAAGCAACAGTTA
CTGCAGGCTAGTGTAACACTAATCAAGTCTAGTTTCTTGATCATACACTC
AGAATAGAAGTTTGTATATATCATTTCTAACGCCAAAACTGGCAGCCATA
CGCCATACAGAACAATAATAACCCGAGTAACTGTTTTGGTCAACCGGATA
TCGTTGTCTTTTCCATTGTGTATCAAACAAGTAGTACTATCTGTTAGCCC
ACCACGCGTCAACTTAACTTGCTTCAAAATACGGTAATAGAGGACAGGTA
TTATTGTGAGTGGTACGATAACGTGAAACCAAATCAAGGAATAATATAGC
CAATGGTTCACATTCCAGACATATTTTCGAACGTGGATCGGTTTCATGTA
ATACCCCATACAAAAGACCCAAATAAATGAATATGCCCAAATTGATGATA
CAATTATTCCCATGAATGTAGGAGTACATATTTTCTCGTATATAGTTTTC
CAACAAATTACCATATATCTTTCTATAGTTATCACCGTTATAGTAGTAAA
GGGAGAAACGACAGAAAACATCCAAACACAATTATAAAGATTGGATCCTA
CACTTCCAAGAGGCCATTCTGGGAAAGttataaagaaaatagtttcaATA
GCAGGCACCAGCAAGCTGATGAATATATCACTGATCGATAAACTAACTAA
AAGAACCATGGAGCGCCTTTGGAGATGTCTTTTACTGTATATAACGTAGC
AGAACAACATATTTTCCAGGATAGCCAAACATCCAACCAACATTAATAGT
AAACTGCTAAAAATCTTGAAAGCCATGTGAAAACAACATGCTTGTGCAGT
GGTGTTATTGCTCCCTGACGAGTTGCTGCTAGCCATGGATGTTTCAGAGC
CTCCTTTTAAAAATGGCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019135-exon-sc0000319-1491911889:178416..179949 | TCONS_00019135-exon-sc0000319-1491911889:178416..179949 | Clytia hemisphaerica | exon |
| TCONS_00019135-exon-sc0000319-1510915933:178416..179949 | TCONS_00019135-exon-sc0000319-1510915933:178416..179949 | Clytia hemisphaerica | exon |
| TCONS_00019135-exon-sc0000319-1575043694:178416..179949 | TCONS_00019135-exon-sc0000319-1575043694:178416..179949 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000319 | supercontig | sc0000319:178416..179949 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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