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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019126 ID=TCONS_00019126|Name=TCONS_00019126|organism=Clytia hemisphaerica|type=transcript|length=2912bp ttccaGATGAATAATAGAAAACAATAAGATTTAGAAAGAtacaaaattaa agatggcgtcAAAAGTATTGACAGGGAGTGGAATGCAATGGTACCAGACA GTTATAACATGTCCAGCTAAAGCAAGGGGAATTCACAAAATTACAGATTT CATCGTTCAAAAGCtaccatttttgaagaagatTAAAGTTGGTACCATGA ATATCGTCATCCAACACACATCAGCAAGTATTTCTTTGAACGAATGTTGG GATTCTTCAGTTCGCACCGATATGGAGATGATGTTAAACAGAATCGCTCC TGAAAATGCACCGTATATCCATACACTGGAAGGTCCTGATGACATGCCTG CTCATGTGAAGTGTAGTTTAATGGGTGCTTCAATCACAGTACCTATTACT GAAGGTAGACTCAATCTTGGTACATGGCAAGGAATCTGGTTATGTGAACA CAGGGACCATGCAGGTTCAAGGAATCTGGTGGTAACAGTCCAAGGTTGTG AGTCCTAAGGTGACCTGGTGAAGGTTAAGTAGTTAAACCAGGTTCAACAT TTAAACTAATATGATAGAGAACCAGAAAATATCGTTTATGGGACGTACCG GTATTGAAACAAGGAGAGACTTTGTTTCTATTGCCAATGATCCTATTGAT GAAATTCGTTTTAAGCAATgcatgaaatatttttgttaccTTTTATAGAT TAGTATATTATAGTAAGTATCTTCTATCGCTTGTAAACTTTGCGGATGAT GCagacattgagtttaaagcccgaagggctagagtagaatctttaacctt tcccaGTCAAGAAAAAGTGAtgtcacttatttcccatccagaacgcgcct agaacgcacCGTAATCATGacaacggattgtatctagcggttcctttgat ttttgaggactgcattttcttaaaatctagcgatagattttagtttcaat ccggcgtttgtgtaaaaaccacgcgcgggcgttctggatgggaaaaaCTC TGGCTTCATTTCTCATtttccatccaggagtctcgagtctagcccttcga gcttgCAAGTCAATGGATCAAACTCTGTGGTCAAAGTCACCGTGGTCCAC CAAGTAACTAAAACCGAATAAAGTTCTAGGaaacaaattttgtaaaaagg CAAAAAGCGTTCCTGTATTTATCATTTTCGCCTCGATatattttgacata ttttgtcCGGAAGAAAAAAGCGCTAGCCTTTTAACCATGAAAAATTTTGC CGATAATTACTTCAGAAAGTTTTGCAAGAGCATCTGATAGGATAGCTTta aggtttgaaattttcctatctTAAAATACTACACTCTAAACCCGCCTGCA ATTAAAAGTCTCGCAGACAAtataagattttttcttttattcaatttcaT GTAATTAGTAACCCATTACGTTTTTTATAATGCCAAAGGGTCATGATGAT TAATTAAGAGAATCGATATGTATTTTGTAAGTTTGATGTTTTGAGATTAA GATCAAatcatttttataataattcTTATCGTGGGTGCATGCAAAGATTt atatctttctttctttttttggtaTGTGTAAATATCTTCCACTTGACTTT GCTTGAGATGTCTAAAGCATCTTATCTGAAACATGACAAGAATTTGTCCT TAAAGTGGGTCGATGTTCTGGTCTGGAATTTTACTATTTGTTTTCTTAAG GTTTTAAATATAGATAAATATACTTTTCTACACACTGTGCAATGATACAA TGATGTACTGcggtttttttctcatttgcaGGTATTAGCTTATTCAGCAT ATTGATGCAATTCCAAGAACTTTATAGTTTGTATGTAATATATTTTGAAC AGATAATGTCATAATATCATAAAAACGTCAGAGAGGAAATGCAAGAGAAG ACATTTTAATGTGACAAGTTGTACGATGCTCATTGAGCATTTCCAACCAA CGAACTAAACATGAAGATGGAGAAAAAGAGAGATTTCAGTGTCAAGGAAT TGTTATCTTGGGGTGCTGTACATTCTGGCTACTTATCCAAAGTTGAAAAG AAATCAAGTTTTGCGACCACGAAGAAACCCGTTCAAAGATTTTGTGTGAT TTTCAATGGTGAATTATTCATCTTTGCGGAAAAGACGAGTTCCATACCAC TGTGCAATTTCATCCTTTCCAATTACTgTGTTGAATTGTTTGCAGAGCCA GGGAGAGCACAAACGTTAACGCAGAGTTACTACATCAATTTACAATGCGA AAATAACACGACACAGCATCAATTTGTTTGCCCCACGTATTGGGAGGCTG AGAAATGGTTGAATATAATCAAGAACGAGATGGCATCTTACTATCCCAAT GGAGAGAAAATCAACGGCGAAAGTTATGATTACGCGCAAACCAAACCTAC AGATATCAGTTTCTCGAATCCGGAAAAATACGACGAAAAAATTACCAATG AACTTTTTACTGGCACCTCAAACACTTTTGATGATCATGGGATTTTGCCG GATTCAAATAAAAGTTTCAGAGGACCAACTTGCCGTCTAACGCCTGCAGT CTTCAGGCCTTCATCACCAAAGCTTTCCAAATCTCCAGAACGATCAACTC CTCTCTCCACTTTTCCCATCATTGAAAGTGATCATTACAAAAGTCCAACC GTGAAAGAAGCCTGTGCTTGCCCCATACCTCCGCCACGCCCGGAACATAC TAAGAAGCAAATGCACTCTCTAGCACAGCATAATGAAGCAGAGCAATCTA AAAAANAAGCAAATGCACTCTCTAGCACCGCATAATGAAGCAGAGCAATC TAAAAAACAAACGCACTCTCAGGGACGTCGCTATGAAGTCAGTGAAATAG ACGCTGAGGCAGTAGGTAGTCCTTCGAGATTACCAAATGGCATCAAAGGT CCACCTACATTG Run BLAST on NCBI transcript from alignment at sc0000319:269881..276214- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019126 ID=TCONS_00019126|Name=TCONS_00019126|organism=Clytia hemisphaerica|type=transcript|length=6334bp|location=Sequence derived from alignment at sc0000319:269881..276214- (Clytia hemisphaerica) TTCCAGATGAATAATAGAAAACAATAAGATTTAGAAAGATACAAAATTAA
AGATGGCGTCAAAAGTATTGACAGGGAGTGGAATGCAATGGTACCAGACA
GTTATAACATGTCCAGCTAAAGCAAGGGGAATTCACAAAATTACAGATTT
CATCGTTCAAAGTAAGTTATTCTACATCTAAAATTGTGAATTTTGACCCC
TCCGACAACGGATCTCACTGCCCGGACATGCATCAGATGACCCCCCCCCG
GACGTTCAAAATTACCCCTAACCAGAGCAAGTTTGCCCCTAAAACAAAGC
AAATTTTGCAGATTTTTCACTACCCTTCTGGACAAAATATCCAATATATC
CTCCACCCCCCCCCCCATGTACAACAGTTTTCTGGAAGAGCCCAATGCAA
CGATTTTAAAGACTTTTGTCATCTTTTCAGAGCTACCATTTTTGAAGAAG
ATTAAAGTTGGTACCATGAATATCGTCATCCAACACACATCAGCAAGTAT
TTCTTTGAACGAATGTTGGGATTCTTCAGTTCGCACCGATATGGAGATGA
TGTTAAACAGAATCGCTCCTGAAAATGCACCGTATATCCATACACTGGAA
GGTCCTGATGACATGCCTGCTCATGTGAAGTGTAGTTTAATGGGTGCTTC
AATCACAGTACCTATTACTGAAGGTAGACTCAATCTTGGTACATGGCAAG
GAATCTGGTTATGTGAACACAGGGACCATGCAGGTTCAAGGAATCTGGTG
GTAACAGTCCAAGGTTGTGAGTCCTAAGGTGACCTGGTGAAGGTTAAGTA
GTTAAACCAGGTTCAACATTTAAACTAATATGATAGAGAACCAGAAAATA
TCGTTTATGGGACGTACCGGTATTGAAACAAGGAGAGACTTTGTTTCTAT
TGCCAATGATCCTATTGATGAAATTCGTTTTAAGCAATGCATGAAATATT
TTTGTTACCTTTTATAGATTAGTATATTATAGTAAGTATCTTCTATCGCT
TGTAAACTTTGCGGATGATGCAGACATTGAGTTTAAAGCCCGAAGGGCTA
GAGTAGAATCTTTAACCTTTCCCAGTCAAGAAAAAGTGATGTCACTTATT
TCCCATCCAGAACGCGCCTAGAACGCACCGTAATCATGACAACGGATTGT
ATCTAGCGGTTCCTTTGATTTTTGAGGACTGCATTTTCTTAAAATCTAGC
GATAGATTTTAGTTTCAATCCGGCGTTTGTGTAAAAACCACGCGCGGGCG
TTCTGGATGGGAAAAACTCTGGCTTCATTTCTCATTTTCCATCCAGGAGT
CTCGAGTCTAGCCCTTCGAGCTTGCAAGTCAATGGATCAAACTCTGTGGT
CAAAGTCACCGTGGTCCACCAAGTAACTAAAACCGAATAAAGTTCTAGGA
AACAAATTTTGTAAAAAGGCAAAAAGCGTTCCTGTATTTATCATTTTCGC
CTCGATATATTTTGACATATTTTGTCCGGAAGAAAAAAGCGCTAGCCTTT
TAACCATGAAAAATTTTGCCGATAATTACTTCAGAAAGTTTTGCAAGAGC
ATCTGATAGGATAGCTTTAAGGTTTGAAATTTTCCTATCTTAAAATACTA
CACTCTAAACCCGCCTGCAATTAAAAGTCTCGCAGACAATATAAGATTTT
TTCTTTTATTCAATTTCATGTAATTAGTAACCCATTACGTTTTTTATAAT
GCCAAAGGGTCATGATGATTAATTAAGAGAATCGATATGTATTTTGTAAG
TTTGATGTTTTGAGATTAAGATCAAATCATTTTTATAATAATTCTTATCG
TGGGTGCATGCAAAGATTTATATCTTTCTTTCTTTTTTTGGTATGTGTAA
ATATCTTCCACTTGACTTTGCTTGAGATGTCTAAAGCATCTTATCTGAAA
CATGACAAGAATTTGTCCTTAAAGTGGGTCGATGTTCTGGTCTGGAATTT
TACTATTTGTTTTCTTAAGGTTTTAAATATAGATAAATATACTTTTCTAC
ACACTGTGCAATGATACAATGATGTACTGCGGTTTTTTTCTCATTTGCAG
GTATTAGCTTATTCAGCATATTGATGCAATTCCAAGAACTTTATAGTTTG
TATGTAATATATTTTGAACAGATAATGTCATAATATCATAAAAACGTCAG
AGAGGAAATGCAAGAGAAGACATTTTAATGTGACAAGTTGTACGATGCTG
TACGTATGTATATTTCTATTAATTAATATGTGTTTATGTTTTTTTGTCGA
TTGTATCTGGTTTTCAAATTGTATCAATGTAGACAATATTTCAACGATTA
ACTTTCTTTTTATATGATAAGGTTTTTCCTAGTGCTAGTTTTGATACAGC
AAGTATGTACACTTAAAAAAGAATTATTCTAAAAGAGGAACTCTTAGAGA
CTCTTCTAAAAAAATTTCATCTCCACAAGCTTGTCTTTACTTGTTTTGCA
TATCAAGTAAAATAGGTTTGAATGATATAGTTGTTCATTCGTTGACTGTT
GTGTTCGATTGCGCGTGGATGTTTGTGTGTTTCTGACTGTTTAAATATTT
TGTTAAAGAGAATTTATATTTAATATTTATTATTCTACCTTTTAAACTTG
GCTGTTAGATATACAAAATTGCTGGTTGTGTTTTTTTCTGCTAGAATTAT
TTTTTCATGAATTTCAAAGTTCCTCTTTCAGGTCTGTTAGGTTTCATCTG
AAAATAATACTTTTTTTATAAGAACATCCAAATTTTTTCAAGCCTTCAGA
GATGTTTTGTCTTTTTGAGTTATAAGCCTAAAAATGTTCTTAACATGTTC
TTATTTTCGTCATTTTTGAGTATTTATGTCCATTTTCTTAAGAAATCGGG
TGTTTTGAGTCCGTGAAGCCTTTTTCTTAACTTGTTCTTAACATTTTGGC
CATCGAAGCCTTATGTTCTTATATAGTATATTCTTATAAAAAAACGTGTA
GTTAACAGAAAATGTTCTTTCAGCATTGAGCATTTCCAACCAACGAACTA
AACATGAAGATGGAGAAAAAGAGAGATTTCAGTGTCAAGGAATTGTTATC
TTGGGGTGCTGTACATTCTGGCTACTTATCCAAAGTTGAAAAGAAATCAA
GTTTTGCGACCACGAAGAAACGTAAAGATACCATTCCATTTTTTTATCGT
CACTTTTTACTCTCTTAGTAATTTGTTCTAAATGAAAAACCTACCAGCAA
TCTCGCCGGCAAGTTTTTCCTTTTAGGGATCTGAGTAGCATTGGCAGCTG
ATATTGATCCTGTTTTTAATACATGTTTTTTTTATAAGAACATCAAAATT
TTGGAAGTTTTTCGGATGTTCTTAACTTTGAGTTTTATGCCTAAAAATCT
TCTCAATGCTCTTATTTTCACCCATTATCTTGGTATTTTTGTGCGGTTTC
CTGAGACATTTATTTTTTTAGAGTCGGCAAAGCCTTAAAATGTTTTTTAC
TTGTTCTTGATATTTTGGCCATCGAAGCCTTGTGTACTTATAAAAAACGT
GTGTATCAATTTCTAAATACTCAAAATACACGTTTTTTCATAAAACAAAC
TATATCAGAACATAAGGCTTCGATGGCCAAAATATTAACTACAAGTTAAG
AACATTTTTAGGCTTCTAAAAACTCAAAAAGTTAAGAACATCCCAAGGCT
TAAAAAATTTTGGATGTTCTTATAAAAAAAAGTGTAATCTTCCAATATTT
ATTCATCCGTTACAGCCGTTCAAAGATTTTGTGTGATTTTCAATGGTGAA
TTATTCATCTTTGCGGAAAAGACGAGTTCCATACCACTGTGCAATTTCAT
CCTTTCCAATTACTGGTAATACTTTCTTTTTTATTGGTTACGATTTCGGG
CTCTTCCAGAAAATGTTCGTGATTGGTGAAGGATATAGTGTCTGGGGGGT
AGTGAAAAATCTACAAAATTTGCCTTGCCCAGCTTGGTAAACTTACTCTA
TTTGGGGGTAATTTTGCTCTGTTTGGGGGAGGGTAATTTTGAGTATCCAG
GGGGGCAACTAATGCTTCTCCGGGGGGTCAAAAGTCTCAATGTCCAGGGG
GTAAATTTCCAGAAAATGTTATATCCTCTACCCCCCCCCCTATATTCAAA
TTTTTTCTGGATAACCCCTTTTCATTTCAATTCAATTTTAATATTAGTTT
TGCAATTTGTGTATGGACGGAGATTTGAGATACAATTACACGTCTTAGTA
GTACGAGGCTTTTTGGTTAAATGACCCCATTGATCACAAATTGTCCGTCC
ATATTCGCGAAACCTACCTGTAAATTAGATTGTTGTTCTACGTCTACTAT
CCTCGAGGATTTAGCTTTTGCTTTTTTGGCTTGTCTAGCAGTAAAGGATA
TTAAATGTTCTCAAATGAGACCAAAGGTAAATTTCAAGAAGTATGCACTT
GATGTGCAGAGTAACAATTATTTTTCTTTCCACCTTTTCATAATAGTGTT
GAATTGTTTGCAGAGCCAGGGAGAGCACAAACGTTAACGCAGAGTTACTA
CATCAATTTACAATGCGAAAATAACACGACACAGCATCAATTTGTTTGCC
CCACGTATTGGGAGGCTGAGGTATTTAATATAAACATTAAAAACGTAGTT
TTTCCCCCATTTTTCCATTAACCTTTGGGCTGTGTCAGAAAAGCCGGGCT
TAACTTTTGTTTGCTCCACATAGTCGGGAGGGGGTTGAGATATTTGACAT
AAGCATAAGACGTGGCTACACGGGCCTAGCTTGTTACCACTCTATTTGAG
GAATTTCGTACCTTCACTAGATTGGAATATCGAGGACATTATGCACAGTG
TTGAGGATTTTCTCTTAGATCATTAATATAGCTCAGCTCCTTGCACGCAT
TTGGTTTAAATAAGGAAAATTAATAGAAAATAAAACCATCCCATAACATA
TAGACCTTCATAGTGTCCCCCCCCCCCTTTTAAAAGGGGGGGGGGGGGGG
TTTTTTTTTTTAAAAAAAAAAAAAAGGGGGGGCAANNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAG
GGGGGGGGACCAACTAGGACACTATGACCTTCTAAAACATGTATAACAAC
CGAATCCAGTCTATGTTTCTAGAAAACTATTCTTTTCTATTTTCACTGTT
TGGTCAAATATTTTCTTATCTTCTCAATCTAGAAATGGTTGAATATAATC
AAGAACGAGATGGCATCTTACTATCCCAATGGAGAGAAAATCAACGGCGA
AAGTTATGATTACGCGCAAACCAAACCTACAGATATCAGTTTCTCGAATC
CGGAAAAATACGACGAAAAAATTACCAATGAACTTTTTACTGGCACCTCA
AACACTTTTGATGATCATGGGATTTTGCCGGATTCAAATAAAAGTTTCAG
AGGACCAACTTGCCGTCTAACGCCTGCAGTCTTCAGGCCTTCATCACCAA
AGCTTTCCAAATCTCCAGAACGATCAACTCCTCTCTCCACTTTTCCCATC
ATTGAAAGTGATCATTACAAAAGTCCAACCGTGAAAGAAGCCTGTGCTTG
CCCCATACCTCCGCCACGCCCGGAACATACTAAGAAGCAAATGCACTCTC
TAGCACAGCATAATGAAGCAGAGCAATCTAAAAAANAAGCAAATGCACTC
TCTAGCACCGCATAATGAAGCAGAGCAATCTAAAAAACAAACGCACTCTC
AGGGACGTCGCTATGAAGTCAGTGAAATAGACGCTGAGGCAGTAGGTAAA
ACTAACTGAAATATTTTGGTACTGAATACACAGATTTCGATGATTTTTTC
CATCCTTCACTTTATATTATTTTTTCAATACATACCACTCTACAGTAAGG
AGTATCTGGCAAATGCCTTGTCAAACGACTTTAAGAAAGAATTGACAAGT
TGCCCATTTCCTAGCTTGTTTGTTTTGTAAGGAGAATTTGTTAGGAATAA
CTTTGTAACGAAATAATGCTCCTTCTCTTGATTTTAGGTAGTCCTTCGAG
ATTACCAAATGGCATCAAAGGTCCACCTACATTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
| TCONS_00019126-exon-sc0000319-1575043694:276054..276214 | TCONS_00019126-exon-sc0000319-1575043694:276054..276214 | Clytia hemisphaerica | exon |
| TCONS_00019126-exon-sc0000319-1575043694:274016..275784 | TCONS_00019126-exon-sc0000319-1575043694:274016..275784 | Clytia hemisphaerica | exon |
| TCONS_00019126-exon-sc0000319-1575043694:273094..273241 | TCONS_00019126-exon-sc0000319-1575043694:273094..273241 | Clytia hemisphaerica | exon |
| TCONS_00019126-exon-sc0000319-1575043694:272400..272499 | TCONS_00019126-exon-sc0000319-1575043694:272400..272499 | Clytia hemisphaerica | exon |
| TCONS_00019126-exon-sc0000319-1575043694:271645..271768 | TCONS_00019126-exon-sc0000319-1575043694:271645..271768 | Clytia hemisphaerica | exon |
| TCONS_00019126-exon-sc0000319-1575043694:270170..270732 | TCONS_00019126-exon-sc0000319-1575043694:270170..270732 | Clytia hemisphaerica | exon |
| TCONS_00019126-exon-sc0000319-1575043694:269881..269927 | TCONS_00019126-exon-sc0000319-1575043694:269881..269927 | Clytia hemisphaerica | exon |
| TCONS_00019126-exon-sc0000319-1510915933:276054..276214 | TCONS_00019126-exon-sc0000319-1510915933:276054..276214 | Clytia hemisphaerica | exon |
| TCONS_00019126-exon-sc0000319-1510915933:274016..275784 | TCONS_00019126-exon-sc0000319-1510915933:274016..275784 | Clytia hemisphaerica | exon |
| TCONS_00019126-exon-sc0000319-1510915933:273094..273241 | TCONS_00019126-exon-sc0000319-1510915933:273094..273241 | Clytia hemisphaerica | exon |
| TCONS_00019126-exon-sc0000319-1510915933:272400..272499 | TCONS_00019126-exon-sc0000319-1510915933:272400..272499 | Clytia hemisphaerica | exon |
| TCONS_00019126-exon-sc0000319-1510915933:271645..271768 | TCONS_00019126-exon-sc0000319-1510915933:271645..271768 | Clytia hemisphaerica | exon |
| TCONS_00019126-exon-sc0000319-1510915933:270170..270732 | TCONS_00019126-exon-sc0000319-1510915933:270170..270732 | Clytia hemisphaerica | exon |
| TCONS_00019126-exon-sc0000319-1510915933:269881..269927 | TCONS_00019126-exon-sc0000319-1510915933:269881..269927 | Clytia hemisphaerica | exon |
| TCONS_00019126-exon-sc0000319-1491911889:276054..276214 | TCONS_00019126-exon-sc0000319-1491911889:276054..276214 | Clytia hemisphaerica | exon |
| TCONS_00019126-exon-sc0000319-1491911889:274016..275784 | TCONS_00019126-exon-sc0000319-1491911889:274016..275784 | Clytia hemisphaerica | exon |
| TCONS_00019126-exon-sc0000319-1491911889:273094..273241 | TCONS_00019126-exon-sc0000319-1491911889:273094..273241 | Clytia hemisphaerica | exon |
| TCONS_00019126-exon-sc0000319-1491911889:272400..272499 | TCONS_00019126-exon-sc0000319-1491911889:272400..272499 | Clytia hemisphaerica | exon |
| TCONS_00019126-exon-sc0000319-1491911889:271645..271768 | TCONS_00019126-exon-sc0000319-1491911889:271645..271768 | Clytia hemisphaerica | exon |
| TCONS_00019126-exon-sc0000319-1491911889:270170..270732 | TCONS_00019126-exon-sc0000319-1491911889:270170..270732 | Clytia hemisphaerica | exon |
| TCONS_00019126-exon-sc0000319-1491911889:269881..269927 | TCONS_00019126-exon-sc0000319-1491911889:269881..269927 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000319 | supercontig | sc0000319:269881..276214 - |
Blast
The following BLAST results are available for this feature:
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