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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019107 ID=TCONS_00019107|Name=TCONS_00019107|organism=Clytia hemisphaerica|type=transcript|length=1865bp TCTAGCATCATCCGTCGATGCTACAACGAGATGACATTAGTGTTCAGTCA GTACTTGAAACTCCGTCAAAAACCTATGACTCCCGACACAGAAGACCGAA GGCGTTCAAATACAAAGGGAGGGGCGTTACGCCCAAATGCTCCTaacata aaaagacaacaaTCGCACCCGAAAGATTGTCATCGTTTATCGCGTGGCGC TTGGGTGTGTATTAGGGCGGCAGGTGTCATAGCAAAGGCGCAACGCAAAT CGGAGCTCTTAGCTGGTGAGCTATCAGTTACTTCTCTAGCCATGGAGCAA ACAGCTTGGCAGAATCTTCCTTCTTTCGCTGTTGAAGATCTCATTGGCGT TGAGAATGCAGATCAGCTTAAAGAAGAATCGAACTGCATTGTAAAGCTTA ATGGAGGAAACAACGTTGAAATCACTTGGGTGCATCTTATAAAGTATCTG ATCCATCTAAGACGACATTGCAGCTATTCGTCTCTAGCACTTGGTGATTT CGATAAAGCCATCGTGCGAATATCTTTTCACTCGGCCGCGCGGACCATCA AGCTGAACGTCGTAGCGAAATATTTGGCAGAACATCTGACAGTTTTCGAT AAAGAATGCATTCCAATCTTTCCGATTGATTTGATTGGGGGTCTGGTGGC GAGTGTGACGGCCGATATGGCGACAGTGAAGAAAAGTGCGTCGGATATTT CACAACCTGTGTCACCAATCAAATCGCCTTCTGATGATTTTATGGANGAC AGTGAAGAAAAGTGCGTCGGATATTTCACAACCTGTGTCACCAATCAAAT CGCCTTCTGATGATTTTatggaagaagaagatgaagaagaagaagAAGAA ATGGAAGACTATCCTGACCAACAATCGATTGATTCAACTGCCAATCGGAT ATTAGCCAGTGAAAAAGTCGGAGATCGAGTGGACACGGTCAAAGTGCGCA ACCCTTTGCAAGCCGGTGATCTGGAGATCGCCATCCAATGGTACAAACCA GAGCTGTCCAGTAACCTTGACAACGGATCTATTTTCTTGTTGCTAGCCAT GAATAACAAAACAATCGCTGGGAATTCATCCTCAAACAGTTTTTCACAAG TCTCCTCCTTATTTCACATCGTATTCCGCCTTGAAGATTGTATAGCACTT CATGATGAAATGGTCGATCTGATTCAGAATTCGGAAGGGGCGGATCACGC CATTAAAGCAGGTCAAGCTATGCGAAAGGTGACAGTAGGAGCCATAGCAA CATCACAAGCAGTTTCTAAGATGCAATCCGCCATCTCATCAGTGCAAAAG AAGAGCTCAAAAAGCACTCCTCCTTCGAGACAAAGCACCAAATTTGTAGA TAGTGACGAAGActtgaaatcaaagatgatacCGATAGTGCAAAACATTT CAGAGCTTTTGAAGAGAAACACTATTTCTTCGTCACCTTCAACAGTTTCT TCTCTCAATGTCATGGAAGAAAAGATTCCAGCCATGGAAATGTCCTGGTC AAACTTACTTTGTTTGGAGAGTATGTTCAACCCAAGCCTTGGTCACATTT CTCGAGTACCTGAGACCTTCTTCGCCTGGTTCATTGAACATTTCAACCGT TTAGCTCGCGTTTGACGAAGAGGTAATCTAACGTAAATGAATACTCATCC TTGAAGGTCATGAATACTCAAaggtatttttaatttcttattttttgtgt GGAAATGTGTATGctatatatttttcataatttctgtGTTGAAAGTTTTA CAATTAATAAATTCTTGataatatattttctttataatagtttttgtgta aatactgtaatttaagtttgattatttaaaaaagattttagaaaTCGATC GAATTTTTTGTCGAT Run BLAST on NCBI protein sequence of TCONS_00019107-protein >TCONS_00019107-protein ID=TCONS_00019107-protein|Name=TCONS_00019107-protein|organism=Clytia hemisphaerica|type=polypeptide|length=293bp
MILWXTVKKSASDISQPVSPIKSPSDDFMEEEDEEEEEEMEDYPDQQSID STANRILASEKVGDRVDTVKVRNPLQAGDLEIAIQWYKPELSSNLDNGSI FLLLAMNNKTIAGNSSSNSFSQVSSLFHIVFRLEDCIALHDEMVDLIQNS EGADHAIKAGQAMRKVTVGAIATSQAVSKMQSAISSVQKKSSKSTPPSRQ STKFVDSDEDLKSKMIPIVQNISELLKRNTISSSPSTVSSLNVMEEKIPA MEMSWSNLLCLESMFNPSLGHISRVPETFFAWFIEHFNRLARV Run BLAST on NCBI transcript from alignment at sc0000319:60896..64826- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019107 ID=TCONS_00019107|Name=TCONS_00019107|organism=Clytia hemisphaerica|type=transcript|length=3931bp|location=Sequence derived from alignment at sc0000319:60896..64826- (Clytia hemisphaerica) TCTAGCATCATCCGTCGATGCTACAACGAGATGACATTAGTGTTCAGTCA
GTACTTGAAACTCCGTCAAAAACCTATGACTCCCGACACAGAAGACCGAA
GGCGTTCAAATACAAAGGGAGGGGCGTTACGCCCAAATGCTCCTAACATA
AAAAGACAACAATCGCACCCGAAAGATTGTCATCGTTTATCGCGTGGCGC
TTGGGTGTGTATTAGGGCGGCAGGTGTCATAGCAAAGGCGCAACGCAAAT
CGGAGCTCTTAGCTGGTGAGCTATCAGTTACTTCTCTAGCCATGGAGCAA
ACAGCTTGGCAGAATCTTCCTTCTTTCGCTGTTGAAGATCTCATTGGCGT
TGAGAATGCAGATCAGCTTAAAGAAGAATCGAACTGCATTGTAAAGCTTA
ATGGAGGAAACAACGTTGAAATCACTTGGGTGCATCTTATAAAGTATCTG
ATCCATCTAAGACGACATTGCAGCTATTCGTCTCTAGCACTTGGTGATTT
CGATAAAGCCATCGTGCGAATATCTTTTCACTCGGCCGCGCGGACCATCA
AGCTGAACGTCGTAGCGAAATATTTGGCAGAACATCTGACAGTTTTCGAT
AAAGAATGCATTCCAATCTTTCCGATTGATTTGATTGGGGGTCTGGTGGC
GAGTGTGACGGCCGATATGGCGACAGTGAAGAAAAGTGCGTCGGATATTT
CACAACCTGTGTCACCAATCAAATCGCCTTCTGATGATTTTATGGANGAC
AGTGAAGAAAAGTGCGTCGGATATTTCACAACCTGTGTCACCAATCAAAT
CGCCTTCTGATGATTTTATGGAAGAAGAAGATGAAGAAGAAGAAGGTTGG
AGTTTTTCACTTTTGTTTCATTTTTCATGATTACGTACTATCTTTTGAAC
TAAACACGACGATCGTTATACAAAGAAAGGTCCTCCCGTGAAAACTCAAT
TGGATCAAGTGATTGAGAACAAAAATATAAATTTGAATAGTTTTTGTGTC
CTTGCCATGAGCAGGAAACGAGGAAGGTCTGGTATGAATAGTCTCTCACG
AACACGAGTAGGCCTTGTATGGCTGGAGAGAGTGTTCCATCCCGACCAAG
CTTAGGCCATTGTATTATTTTATTATTATTACACTACATGTACAGTTGAT
GCTCTCTAATTCGATCCTCAAGGGGAATCGGATTTTCGTCGAATAAGAGA
GCTTATCGAATAAGGGAACGTCGTTTATGAGAGTTTCTTGTTGATGGGGA
CTTTAAATTTCATCGAACAAGGGAGCCTATCGAATAGTAGAACGTCGAAT
TAGAGAGCGTCAACTTTATAATAAATTCCGCCGTCAATAGTATTATACAC
ACTAATAACATTTTACTCGTTCATTTTTGCCACTTTTTTTCATTGACAGA
AGAAATGGAAGACTATCCTGACCAACAATCGATTGATTCAACTGCCAATC
GGATATTAGCCAGTGAAAAAGTCGGAGATCGAGTGGACACGGTCAAAGTG
CGCAACCCTTTGCAAGCCGGTGATCTGGAGATCGCCATCCAATGGTACAA
ACCAGAGCTGTCCAGTAACCTTGACAACGGATCTATTTTCTTGTTGCTAG
CCATGAATAACAAAACAATCGCTGGGAATTCATCCTCAAACAGTTTTTCA
CAAGTCTCCTCCTTATTTCACATCGTATTCCGCCTTGAAGATTGTATAGC
ACTTCATGATGAAATGGTCGATCTGATTCAGAATTCGGAAGGGGCGGATC
ACGCCATTAAAGCAGGTTTGTTTGCACCCCCTCTATTCTGTATATGCTTT
GGGTTCATTAAAATCCATCGATTAGTTCAAAAAATTTTTTGGAACTTCAG
CTGACGCTCGCTAATTAGAACTCGAACGGGGATTCTTATTTGTTCGATAT
AGAAGATATTTTACGAGGATTTCCCTAAGACGGGAGCTGACAATTAGTTC
GAATAATAGAAGTTCAAATTAGCGAAAGTTAACTGTAAATGATCAATCAA
AATCGCACTTATGTTTTTCAGGCTTCACAAAAGTTATGTAAATTACTAAA
ATCAAGCCGCTATGAAAACAAACGTTCGAATTTGTAAAGGCGATTGCTTA
AACAAATCGAACGTTATATCCAATTATTGTTGAAGTTACATGATAAAGTC
ACACTGAAAAACCTCTATATGATTCGCTGTATGATGCGATAATTTACATC
TCTCCTCACTTCCATTTTCAGGTCAAGCTATGCGAAAGGTGACAGTAGGA
GCCATAGCAACATCACAAGCAGTTTCTAAGATGCAATCCGCCATCTCATC
AGTGCAAAAGAAGAGCTCAAAAAGCACTCCTCCTTCGAGACAAAGCACCA
AATTTGTAGATAGTGACGAAGACTTGAAATCAAAGATGATACCGATAGTG
CAAAACATTTCAGAGCTTTTGAAGAGAAACACTATTTCTTCGTCACCTTC
AACAGTTTCTTCTCTCAATGTCATGGAAGAAAAGGTTGGGAATAGTTCTT
CAATTTATATTCCCAGGAATACCTCGTCTTTTTACTGCTGTTTAACTTCT
TGCTTATTCAACATACAACCAGTGACATACCAACCTCGCCCCTGTGTAGC
ACAGGCTTTACATGTTGTTTTTTTTATAAGCATGCAAAAATCCGAAAACA
GGCTCAGAGATGCTTAGGTCAATAATAAGGCTGAAAAATGCTTGAGGGGT
GCTTAAATCTAAAGGATAAATTTAGGAAAATACTGAAAATCTGTAAAATT
CCAGCCAATAAAAGCCAAAACCAGGAAAAAAACATTTTTCGTAGGCTCAA
GTAATGCTTGCCATATGCTTAATTTTTCCCCATATCTGAGCCTAGATATG
CTTATAAGTGCAATGCTTATAAAAAAGAACATGTATTTACGTTACTGATG
AACGGCAGAGATGCCAAAGAGTATTATATGGCGCTATCAGTAAGCATCAG
AAAGCTGATAAATACGCAGAGACATACATGGGGAATTTTGAGTGCACATA
GAGAATACATTATAGAAAGTATTTCATTATCACTAAAGAAAAAAAAATTG
CGCATATAATGAAAATTCGCGAGATTTTTGCATTGTACAAGAATTAAATT
TCTCGAATACACGTCTTTTTTTTTTTAAGAAACACACTTTTAAGAAACAT
GAGGCTCAGAATGCCTTAAAACTAAGAAACATCTAAGAAACATGCTGAGG
CTGAGAATGAGAAAATAACATTTTTTAATTGGGTTTTTAATAAGAACCTT
CCAATCAAGGCTAATTATGTCAAAAAGTTTAGAAACATGTAAGAAACATT
TAAGGCTCAAAAGGCCGATTTCTTAAAAAACATTGAGGCTGCTTGGTAAA
ACTAGTTTCTTAAAAAAAAAAAAGACGTGTAGAGCTTTTTTAGGAGAGTA
CAGTATGAGAGAGAAAGATTTCGCAAATCAGCTTTTAAAGATTTTTGGTG
AAAATGACTAATGAGTTTGCATTGTGTTCTTCTTGGGTGTTATGAGAAAT
AAATGATGATTTATTGATTTATTGTATATTCTTATTTCAGATTCCAGCCA
TGGAAATGTCCTGGTCAAACTTACTTTGTTTGGAGAGTATGTTCAACCCA
AGCCTTGGTCACATTTCTCGAGTACCTGAGACCTTCTTCGCCTGGTTCAT
TGAACATTTCAACCGTTTAGCTCGCGTTTGACGAAGAGGTAATCTAACGT
AAATGAATACTCATCCTTGAAGGTCATGAATACTCAAAGGTATTTTTAAT
TTCTTATTTTTTGTGTGGAAATGTGTATGCTATATATTTTTCATAATTTC
TGTGTTGAAAGTTTTACAATTAATAAATTCTTGATAATATATTTTCTTTA
TAATAGTTTTTGTGTAAATACTGTAATTTAAGTTTGATTATTTAAAAAAG
ATTTTAGAAATCGATCGAATTTTTTGTCGAT Coding sequence (CDS) from alignment at sc0000319:60896..64826- >TCONS_00019107 ID=TCONS_00019107|Name=TCONS_00019107|organism=Clytia hemisphaerica|type=CDS|length=3528bp|location=Sequence derived from alignment at sc0000319:60896..64826- (Clytia hemisphaerica) ATTCCAGCCATGGAAATGTCCTGGTCAAACTTACTTTGTTTGGAGAGTAT GTTCAACCCAAGCCTTGGTCACATTTCTCGAGTACCTGAGACCTTCTTCG CCTGGTTCATTGAACATTTCAACCGTTTAGCTCGCGTTTGAGTCAAGCTA TGCGAAAGGTGACAGTAGGAGCCATAGCAACATCACAAGCAGTTTCTAAG ATGCAATCCGCCATCTCATCAGTGCAAAAGAAGAGCTCAAAAAGCACTCC TCCTTCGAGACAAAGCACCAAATTTGTAGATAGTGACGAAGACTTGAAAT CAAAGATGATACCGATAGTGCAAAACATTTCAGAGCTTTTGAAGAGAAAC ACTATTTCTTCGTCACCTTCAACAGTTTCTTCTCTCAATGTCATGGAAGA AAAGAAGAAATGGAAGACTATCCTGACCAACAATCGATTGATTCAACTGC CAATCGGATATTAGCCAGTGAAAAAGTCGGAGATCGAGTGGACACGGTCA AAGTGCGCAACCCTTTGCAAGCCGGTGATCTGGAGATCGCCATCCAATGG TACAAACCAGAGCTGTCCAGTAACCTTGACAACGGATCTATTTTCTTGTT GCTAGCCATGAATAACAAAACAATCGCTGGGAATTCATCCTCAAACAGTT TTTCACAAGTCTCCTCCTTATTTCACATCGTATTCCGCCTTGAAGATTGT ATAGCACTTCATGATGAAATGGTCGATCTGATTCAGAATTCGGAAGGGGC GGATCACGCCATTAAAGCAGATGATTTTATGGANGACAGTGAAGAAAAGT GCGTCGGATATTTCACAACCTGTGTCACCAATCAAATCGCCTTCTGATGA TTTTATGGAAGAAGAAGATGAAGAAGAAGAAGATTCCAGCCATGGAAATG TCCTGGTCAAACTTACTTTGTTTGGAGAGTATGTTCAACCCAAGCCTTGG TCACATTTCTCGAGTACCTGAGACCTTCTTCGCCTGGTTCATTGAACATT TCAACCGTTTAGCTCGCGTTTGAGTCAAGCTATGCGAAAGGTGACAGTAG GAGCCATAGCAACATCACAAGCAGTTTCTAAGATGCAATCCGCCATCTCA TCAGTGCAAAAGAAGAGCTCAAAAAGCACTCCTCCTTCGAGACAAAGCAC CAAATTTGTAGATAGTGACGAAGACTTGAAATCAAAGATGATACCGATAG TGCAAAACATTTCAGAGCTTTTGAAGAGAAACACTATTTCTTCGTCACCT TCAACAGTTTCTTCTCTCAATGTCATGGAAGAAAAGAAGAAATGGAAGAC TATCCTGACCAACAATCGATTGATTCAACTGCCAATCGGATATTAGCCAG TGAAAAAGTCGGAGATCGAGTGGACACGGTCAAAGTGCGCAACCCTTTGC AAGCCGGTGATCTGGAGATCGCCATCCAATGGTACAAACCAGAGCTGTCC AGTAACCTTGACAACGGATCTATTTTCTTGTTGCTAGCCATGAATAACAA AACAATCGCTGGGAATTCATCCTCAAACAGTTTTTCACAAGTCTCCTCCT TATTTCACATCGTATTCCGCCTTGAAGATTGTATAGCACTTCATGATGAA ATGGTCGATCTGATTCAGAATTCGGAAGGGGCGGATCACGCCATTAAAGC AGATGATTTTATGGANGACAGTGAAGAAAAGTGCGTCGGATATTTCACAA CCTGTGTCACCAATCAAATCGCCTTCTGATGATTTTATGGAAGAAGAAGA TGAAGAAGAAGAAGATTCCAGCCATGGAAATGTCCTGGTCAAACTTACTT TGTTTGGAGAGTATGTTCAACCCAAGCCTTGGTCACATTTCTCGAGTACC TGAGACCTTCTTCGCCTGGTTCATTGAACATTTCAACCGTTTAGCTCGCG TTTGAGTCAAGCTATGCGAAAGGTGACAGTAGGAGCCATAGCAACATCAC AAGCAGTTTCTAAGATGCAATCCGCCATCTCATCAGTGCAAAAGAAGAGC TCAAAAAGCACTCCTCCTTCGAGACAAAGCACCAAATTTGTAGATAGTGA CGAAGACTTGAAATCAAAGATGATACCGATAGTGCAAAACATTTCAGAGC TTTTGAAGAGAAACACTATTTCTTCGTCACCTTCAACAGTTTCTTCTCTC AATGTCATGGAAGAAAAGAAGAAATGGAAGACTATCCTGACCAACAATCG ATTGATTCAACTGCCAATCGGATATTAGCCAGTGAAAAAGTCGGAGATCG AGTGGACACGGTCAAAGTGCGCAACCCTTTGCAAGCCGGTGATCTGGAGA TCGCCATCCAATGGTACAAACCAGAGCTGTCCAGTAACCTTGACAACGGA TCTATTTTCTTGTTGCTAGCCATGAATAACAAAACAATCGCTGGGAATTC ATCCTCAAACAGTTTTTCACAAGTCTCCTCCTTATTTCACATCGTATTCC GCCTTGAAGATTGTATAGCACTTCATGATGAAATGGTCGATCTGATTCAG AATTCGGAAGGGGCGGATCACGCCATTAAAGCAGATGATTTTATGGANGA CAGTGAAGAAAAGTGCGTCGGATATTTCACAACCTGTGTCACCAATCAAA TCGCCTTCTGATGATTTTATGGAAGAAGAAGATGAAGAAGAAGAAGATTC CAGCCATGGAAATGTCCTGGTCAAACTTACTTTGTTTGGAGAGTATGTTC AACCCAAGCCTTGGTCACATTTCTCGAGTACCTGAGACCTTCTTCGCCTG GTTCATTGAACATTTCAACCGTTTAGCTCGCGTTTGAGTCAAGCTATGCG AAAGGTGACAGTAGGAGCCATAGCAACATCACAAGCAGTTTCTAAGATGC AATCCGCCATCTCATCAGTGCAAAAGAAGAGCTCAAAAAGCACTCCTCCT TCGAGACAAAGCACCAAATTTGTAGATAGTGACGAAGACTTGAAATCAAA GATGATACCGATAGTGCAAAACATTTCAGAGCTTTTGAAGAGAAACACTA TTTCTTCGTCACCTTCAACAGTTTCTTCTCTCAATGTCATGGAAGAAAAG AAGAAATGGAAGACTATCCTGACCAACAATCGATTGATTCAACTGCCAAT CGGATATTAGCCAGTGAAAAAGTCGGAGATCGAGTGGACACGGTCAAAGT GCGCAACCCTTTGCAAGCCGGTGATCTGGAGATCGCCATCCAATGGTACA AACCAGAGCTGTCCAGTAACCTTGACAACGGATCTATTTTCTTGTTGCTA GCCATGAATAACAAAACAATCGCTGGGAATTCATCCTCAAACAGTTTTTC ACAAGTCTCCTCCTTATTTCACATCGTATTCCGCCTTGAAGATTGTATAG CACTTCATGATGAAATGGTCGATCTGATTCAGAATTCGGAAGGGGCGGAT CACGCCATTAAAGCAGATGATTTTATGGANGACAGTGAAGAAAAGTGCGT CGGATATTTCACAACCTGTGTCACCAATCAAATCGCCTTCTGATGATTTT ATGGAAGAAGAAGATGAAGAAGAAGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
| TCONS_00019107-exon-sc0000319-1575043694:63982..64826 | TCONS_00019107-exon-sc0000319-1575043694:63982..64826 | Clytia hemisphaerica | exon |
| TCONS_00019107-exon-sc0000319-1575043694:63062..63427 | TCONS_00019107-exon-sc0000319-1575043694:63062..63427 | Clytia hemisphaerica | exon |
| TCONS_00019107-exon-sc0000319-1575043694:62343..62605 | TCONS_00019107-exon-sc0000319-1575043694:62343..62605 | Clytia hemisphaerica | exon |
| TCONS_00019107-exon-sc0000319-1575043694:60896..61286 | TCONS_00019107-exon-sc0000319-1575043694:60896..61286 | Clytia hemisphaerica | exon |
| TCONS_00019107-exon-sc0000319-1510915933:63982..64826 | TCONS_00019107-exon-sc0000319-1510915933:63982..64826 | Clytia hemisphaerica | exon |
| TCONS_00019107-exon-sc0000319-1510915933:63062..63427 | TCONS_00019107-exon-sc0000319-1510915933:63062..63427 | Clytia hemisphaerica | exon |
| TCONS_00019107-exon-sc0000319-1510915933:62343..62605 | TCONS_00019107-exon-sc0000319-1510915933:62343..62605 | Clytia hemisphaerica | exon |
| TCONS_00019107-exon-sc0000319-1510915933:60896..61286 | TCONS_00019107-exon-sc0000319-1510915933:60896..61286 | Clytia hemisphaerica | exon |
| TCONS_00019107-exon-sc0000319-1491911889:63982..64826 | TCONS_00019107-exon-sc0000319-1491911889:63982..64826 | Clytia hemisphaerica | exon |
| TCONS_00019107-exon-sc0000319-1491911889:63062..63427 | TCONS_00019107-exon-sc0000319-1491911889:63062..63427 | Clytia hemisphaerica | exon |
| TCONS_00019107-exon-sc0000319-1491911889:62343..62605 | TCONS_00019107-exon-sc0000319-1491911889:62343..62605 | Clytia hemisphaerica | exon |
| TCONS_00019107-exon-sc0000319-1491911889:60896..61286 | TCONS_00019107-exon-sc0000319-1491911889:60896..61286 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000319 | supercontig | sc0000319:60896..64826 - |
Blast
The following BLAST results are available for this feature:
|