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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019082 ID=TCONS_00019082|Name=TCONS_00019082|organism=Clytia hemisphaerica|type=transcript|length=960bp
tAATGTTTTACTGTGCATCAGCAGCTGACTATGGAGGTGATTCACCAGTT
GTTTTTAATCGTGACATCAAAAAAAGTCTGGATACGAGTGACGtatatga
aaaaatgaaaaagaagaagatcagATACATTCGTAATTTATCACATGAGA
AAAACTCACCATATTTAACATGGCAGGAGACATTCAAGACGAAAAGTGAA
GAGGTAATTTGATTATCCAGGAGCACTGACTTTGACGACCAACGGGGACT
GCTGCCactaaagttgaaaatttttctaattttgaccctgaaaattgtcc
aaaataagcAAAAGTCGACCCTCTCAGATATACAGATATACATCTTGAAA
ACAtattgaaaattagtaaattcgAACCCTTTCAGGTATCTTCAGAGCCC
AAAAAGGAACCCTGACCAGCGATcccatacccaattttgccAAAGTGTCT
CCCATAGGTGGAATTGTAAATAAACCTTTGATAGAGACACTAATGAGAGG
ATTTCATTAATTCACTATGCATAGAAAGCAGAGAAAGTCATGCTGCGTGA
GAACATGGATTGGGAGTGGCAATCCAACGGAGATCTTTCATTATGGAACA
CAGCGAGTGCAACTACACAACACCCTGtaacaaaagaagaaatatgGTTT
AATCAAGTCACGGCTGCACATTCATCTTACTACAAAGACATGTCAATTGT
AAGTTATCGTTCAAAACAATATTTCATCAGAAAGTTGTAAAGTCTGCTAA
ATCAAGCGCCTCACGCGCCAGCGCCATTTTTTCATGCGCCTTGAATTTTT
TGACGTACCTTATATTCTTCACGCGTCTTTAGTTTTCACGCGCCTTGATT
ATTTTCATGCGCCCTTGAATTTTCACGCGCCCATATTTTCTACGCGCCTT
AATTTTTTTCGCCCGCCCATATTTTCCAGgcgcttttaattttttttcac
atgcacCCTA Run BLAST on NCBI transcript from alignment at sc0000317:343876..344835 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019082 ID=TCONS_00019082|Name=TCONS_00019082|organism=Clytia hemisphaerica|type=transcript|length=960bp|location=Sequence derived from alignment at sc0000317:343876..344835 (Clytia hemisphaerica)
TAGGgtgcatgtgaaaaaaaattaaaagcgcCTGGAAAATATGGGCGGGC
GAAAAAAATTAAGGCGCGTAGAAAATATGGGCGCGTGAAAATTCAAGGGC
GCATGAAAATAATCAAGGCGCGTGAAAACTAAAGACGCGTGAAGAATATA
AGGTACGTCAAAAAATTCAAGGCGCATGAAAAAATGGCGCTGGCGCGTGA
GGCGCTTGATTTAGCAGACTTTACAACTTTCTGATGAAATATTGTTTTGA
ACGATAACTTACAATTGACATGTCTTTGTAGTAAGATGAATGTGCAGCCG
TGACTTGATTAAACcatatttcttcttttgttaCAGGGTGTTGTGTAGTT
GCACTCGCTGTGTTCCATAATGAAAGATCTCCGTTGGATTGCCACTCCCA
ATCCATGTTCTCACGCAGCATGACTTTCTCTGCTTTCTATGCATAGTGAA
TTAATGAAATCCTCTCATTAGTGTCTCTATCAAAGGTTTATTTACAATTC
CACCTATGGGAGACACTTTggcaaaattgggtatgggATCGCTGGTCAGG
GTTCCTTTTTGGGCTCTGAAGATACCTGAAAGGGTTcgaatttactaatt
ttcaataTGTTTTCAAGATGTATATCTGTATATCTGAGAGGGTCGACTTT
Tgcttattttggacaattttcagggtcaaaattagaaaaattttcaactt
tagtGGCAGCAGTCCCCGTTGGTCGTCAAAGTCAGTGCTCCTGGATAATC
AAATTACCTCTTCACTTTTCGTCTTGAATGTCTCCTGCCATGTTAAATAT
GGTGAGTTTTTCTCATGTGATAAATTACGAATGTATctgatcttcttctt
tttcattttttcatataCGTCACTCGTATCCAGACTTTTTTTGATGTCAC
GATTAAAAACAACTGGTGAATCACCTCCATAGTCAGCTGCTGATGCACAG
TAAAACATTa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019082-exon-sc0000317-1491911889:343876..344835 | TCONS_00019082-exon-sc0000317-1491911889:343876..344835 | Clytia hemisphaerica | exon |
| TCONS_00019082-exon-sc0000317-1510915933:343876..344835 | TCONS_00019082-exon-sc0000317-1510915933:343876..344835 | Clytia hemisphaerica | exon |
| TCONS_00019082-exon-sc0000317-1575043694:343876..344835 | TCONS_00019082-exon-sc0000317-1575043694:343876..344835 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000317 | supercontig | sc0000317:343876..344835 . |
Blast
The following BLAST results are available for this feature:
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