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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019075 ID=TCONS_00019075|Name=TCONS_00019075|organism=Clytia hemisphaerica|type=transcript|length=992bp
aGCGTGCATGTAAAAGGACTGTTTCAAAAGTCCTTGAAGGAGAATAAACA
AGGTCATCTGGTGGTTGTTTAAAAGTTTATTCGTGTATCAAGAATAGATA
CAATCATCGACAAACAATTCTTAAAATCTAAGTTCATAATCATATTTTCA
TCAAATCCACCACTATGGAGATTCAAAACAGGCTATTCATTGCATTGGTA
CTTTTGACTTCATACATCATCCAAGGATATGTATTGTCTGAAAGAAAATC
CTCCAGTAATCAAGATGACATGAAATCTCTACTGAAAGACATTGAGGAGC
TTAAAGACAGTGAAATGCTGAAAGAAGTAGTATCAGATGGTCAAAGCTCC
AACCAAATCAATATGGATCTTCAAAGAAGATTATGGGCGCAGTCTAAAGC
ATATCGACAAGTCACTGAATGGTTTATGAAACGTTATGAAAACCAAGGTA
TTTCATATCGTCCATTTCCAAGCTGCAAGGAAAGTCAAATACCTGAGAAG
ATTTgtaaagtgatttttgatgGTTATGGATTAAGACACACTTGTAGAAC
AGTTTATCCTATAACTTGTATGTAAACCGTGTAAACtggtacacccctgt
ctcacagccccggtgagaCTTTTTTTCTGGGGGTGTAAATTCcttttgaa
atcccaatggggatagaaattctattgtttcaatgttaaaaaatccagtg
gggatggttttggagtgcaatttttcgtAAACGTTGAATCTTGAGTGGGG
ATGaagtcaaagtcaatttcccagtggggctgaaattccaggttattttc
ctaccggggacGAATTTTTAGCTAAATTTTCCGGcagggctggggtccca
gcgggtctgtggcACAGGGGTGTACTGCTCTCTAAACTCGTTCTTGCCTA
cttagaattttatttttggggAATATTAATTTATTGTAGAGGTATATTTG
TTTAGTTTTTATTATCTTAGCAGGTGTAAAATATTTTCGTTG Run BLAST on NCBI protein sequence of TCONS_00019075-protein >TCONS_00019075-protein ID=TCONS_00019075-protein|Name=TCONS_00019075-protein|organism=Clytia hemisphaerica|type=polypeptide|length=136bp
MEIQNRLFIALVLLTSYIIQGYVLSERKSSSNQDDMKSLLKDIEELKDSE
MLKEVVSDGQSSNQINMDLQRRLWAQSKAYRQVTEWFMKRYENQGISYRP
FPSCKESQIPEKICKVIFDGYGLRHTCRTVYPITCM Run BLAST on NCBI transcript from alignment at sc0000317:270486..271477 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019075 ID=TCONS_00019075|Name=TCONS_00019075|organism=Clytia hemisphaerica|type=transcript|length=992bp|location=Sequence derived from alignment at sc0000317:270486..271477 (Clytia hemisphaerica)
CAACGAAAATATTTTACACCTGCTAAGATAATAAAAACTAAACAAATATA
CCTCTACAATAAATTAATATTccccaaaaataaaattctaagTAGGCAAG
AACGAGTTTAGAGAGCAGTACACCCCTGTgccacagacccgctgggaccc
cagccctgCCGGAAAATTTAGCTAAAAATTCgtccccggtaggaaaataa
cctggaatttcagccccactgggaaattgactttgacttCATCCCCACTC
AAGATTCAACGTTTacgaaaaattgcactccaaaaccatccccactggat
tttttaacattgaaacaatagaatttctatccccattgggatttcaaaag
GAATTTACACCCCCAGAAAAAAAGtctcaccggggctgtgagacaggggt
gtaccaGTTTACACGGTTTACATACAAGTTATAGGATAAACTGTTCTACA
AGTGTGTCTTAATCCATAACcatcaaaaatcactttacAAATCTTCTCAG
GTATTTGACTTTCCTTGCAGCTTGGAAATGGACGATATGAAATACCTTGG
TTTTCATAACGTTTCATAAACCATTCAGTGACTTGTCGATATGCTTTAGA
CTGCGCCCATAATCTTCTTTGAAGATCCATATTGATTTGGTTGGAGCTTT
GACCATCTGATACTACTTCTTTCAGCATTTCACTGTCTTTAAGCTCCTCA
ATGTCTTTCAGTAGAGATTTCATGTCATCTTGATTACTGGAGGATTTTCT
TTCAGACAATACATATCCTTGGATGATGTATGAAGTCAAAAGTACCAATG
CAATGAATAGCCTGTTTTGAATCTCCATAGTGGTGGATTTGATGAAAATA
TGATTATGAACTTAGATTTTAAGAATTGTTTGTCGATGATTGTATCTATT
CTTGATACACGAATAAACTTTTAAACAACCACCAGATGACCTTGTTTATT
CTCCTTCAAGGACTTTTGAAACAGTCCTTTTACATGCACGCt Coding sequence (CDS) from alignment at sc0000317:270486..271477 >TCONS_00019075 ID=TCONS_00019075|Name=TCONS_00019075|organism=Clytia hemisphaerica|type=CDS|length=411bp|location=Sequence derived from alignment at sc0000317:270486..271477 (Clytia hemisphaerica)
TTACATACAAGTTATAGGATAAACTGTTCTACAAGTGTGTCTTAATCCAT
AACcatcaaaaatcactttacAAATCTTCTCAGGTATTTGACTTTCCTTG
CAGCTTGGAAATGGACGATATGAAATACCTTGGTTTTCATAACGTTTCAT
AAACCATTCAGTGACTTGTCGATATGCTTTAGACTGCGCCCATAATCTTC
TTTGAAGATCCATATTGATTTGGTTGGAGCTTTGACCATCTGATACTACT
TCTTTCAGCATTTCACTGTCTTTAAGCTCCTCAATGTCTTTCAGTAGAGA
TTTCATGTCATCTTGATTACTGGAGGATTTTCTTTCAGACAATACATATC
CTTGGATGATGTATGAAGTCAAAAGTACCAATGCAATGAATAGCCTGTTT
TGAATCTCCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019075-exon-sc0000317-1491911889:270486..271477 | TCONS_00019075-exon-sc0000317-1491911889:270486..271477 | Clytia hemisphaerica | exon |
| TCONS_00019075-exon-sc0000317-1510915933:270486..271477 | TCONS_00019075-exon-sc0000317-1510915933:270486..271477 | Clytia hemisphaerica | exon |
| TCONS_00019075-exon-sc0000317-1575043694:270486..271477 | TCONS_00019075-exon-sc0000317-1575043694:270486..271477 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000317 | supercontig | sc0000317:270486..271477 . |
Blast
The following BLAST results are available for this feature:
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