TCONS_00019032 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019032
Unique NameTCONS_00019032
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1440

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019032 ID=TCONS_00019032|Name=TCONS_00019032|organism=Clytia hemisphaerica|type=transcript|length=1440bp
GTCTAAGAAGGAAATCACAGAAGCTGAATGAAGGTTGGTCAACAGTAAGC
TCCTTtaccaactctacctgctgcaACATGTTTTTTGGGTTTTTCTTTTG
GAAGATCTTCAAATTTACATTTGGACGTGACAAGGCAAATCAACTGTTGG
ATGTTCTTGAACAAACTCTGACTCTGAATCAAAAGATAAAGTTTCTTCCT
GTTCTGGAGTTTCATTTTTGCCAACCGGTGTTGAAGTGGACGTTTTTGAA
ATCAAGCGTTTTATATCTCCAACAACTGCCTCATCCAATGTCATGTAAAC
TGAATCCCGgaagGAATTTGCGTGTCAATGTAGTCAACATACCAGAAACT
GATTTGTCATTGGCCTGTTTAAGTCCTTCCCATGCGCACAGAACAAATTG
TACGAAGCATTGATGACAAAAGGAGTTCCGGAGAAAGGTATCTTCCAAAG
TTGATGATCGCAGTACGATATAGTCTCCAGCTAAAGGAAAGGAAACTTTg
tgaaagaatatttttgctAAGACCGTGGATGGACCTTCTAAACATGTTGA
AGTTTTAGTAATTGAGCTACATCCTTGTTATAATCAATCAAATTATAAAG
ATGATGCGtactaaaaatttaaaacacaaaacattttcttgaacGATATT
TCAATCCTCTCAGACATTTATCAAGTTTCTTGTTATAATTGAAAAATCGA
CCCATACTTACTTTGATTTTCGTTGGCGTCACTAGTAAATCTTGTTGATG
AACCTTGTTCATTGCTCTCACTCCTGAAAATAAAGTGATATAGAATTACT
ATACATTACCGAATTATTAGATAATCACCTTGGGATGATCCAACTTTTAG
TATGTGAAGATCACTTCCTCCCTCGACTTATTACAGCTCGATTGATTTAG
ACTAACCACTGTTTTACGATCATACCTGTCATGGAAGTTATTGTCCGTGT
GCTCTggttcaaaagatttttttctaaaggctaTATTTTTAACACCATCT
TCAATGTCTGATTCATCCGATTCCGAATCTGTTTCTGAAAATATTGAACA
TTCTTTCTCTGCATTTGTGTCTTCGATTTCAGCGTACACATCCAAGTTAA
CAAGTTCTTCATCTTCTTCGATCTCCACTAAATTTATAGGAGTAGTACGA
AAAATTTATTACTTGCGTTTAGACAGCTAAAACTAAAGGGCCACCACCTA
CGTCACTACCTTTTCTTGTATTGCGAAATGTTTTGCGGATACAATCGGAG
AAtggaaacattcgaaaaagtagaATTTGAAccatttttaattgaaaatt
ttgtaattgttcaaaaaattgtgagtagTTCGAAAAGGTTCGAGTAAGAC
ATAGCTAGATTATTTACATcgtttttcaaatttgtatttattAGTTTACT
ATATTAACTAGTCTAAAAAGATCTTTAACCGAAATATGCG
Run BLAST on NCBI

protein sequence of TCONS_00019032-protein

>TCONS_00019032-protein ID=TCONS_00019032-protein|Name=TCONS_00019032-protein|organism=Clytia hemisphaerica|type=polypeptide|length=136bp
LRRKSQKLNEGWSTVSSFTNSTCCNMFFGFFFWKIFKFTFGRDKANQLLD
VLEQTLTLNQKIKFLPVLEFHFCQPVLKWTFLKSSVLYLQQLPHPMSCKL
NPGRNLRVNVVNIPETDLSLACLSPSHAHRTNCTKH
Run BLAST on NCBI

transcript from alignment at sc0000317:96530..110964-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019032 ID=TCONS_00019032|Name=TCONS_00019032|organism=Clytia hemisphaerica|type=transcript|length=14435bp|location=Sequence derived from alignment at sc0000317:96530..110964- (Clytia hemisphaerica)
GTCTAAGAAGGAAATCACAGAAGCTGAATGAAGGTTGGTCAACAGTAAGG
TAAGTCTTTTAAAACTCCTATAAATACAGTACAGAACATGTAAGAATCAC
AGAAACTGAATGCAAGGTTGATCAACAGTAAGGTAAGTCTTTTAAAACTC
CTATAAATACGGAAATAAATACAGTATATACACAGAACATGTAAGTCAAA
ACTGTTACCATATTTTGTATACTGCTACAATACAAATAAAGCATAGAAGA
ATAATCATATGAGCTTTAACGGCTTTGTTGTTGCGAAAATACAGCAGAAA
CATAATGAAAGATATAAACTCCCATATAAAAACCAAACTAGCTAGACAAC
ACTATGATAAAAAAACATATATACAAGTTATAAAAATTAGCTTTTTCAAC
TGTTAAAACAGTTGAACAAGGTCTGAGGTTAAAATATGTTTTAAAAAAGG
AAGGAAATGAAAATTAAATTAAAGAAAAGAAATATATGTTAAATACTGTA
TACCCCCCTTATAATATATATTAATTTTTTGAAGCAATACACCGTTTAGT
AGTGTCGACTGCGCACGCGTCCAAACAATTTTCCATTGTTTTGATTTTAG
CAATCGCGGTAAACTACGGGGGAGAGCGTAAAAAACGGTAGGTAAAAATT
TGGTTTTAATAAGGAAACTCAGTAGAAAAAAACAGTAGGTAAAGAACTCC
TTTTAATCATAACTTCTTTTCCTCTAGATGAATTTTTGTGAAATTTTCAG
GAGAGATCCATAAAATTATCATTTATATCATGTTCAAATATATAAATCAT
TCTTTTTAAAGGAAAGAAAAAAATTGACAATGTTTACATTCCTCTAACCT
TCCACAGTACTAAAGTGTGCATTTTTACCTACCATTTTCACGGTGGAACA
CGGTGGAGGAGGTGAGACTCCTAAACGGTGTATTATATGAATGACAAAGC
ACATATATCGTCAGAGTACAGAGAGAGGGAGCTTTAGAATTAAGTAATGA
CAATGAGCCACAAAGACTAAAATACCAAAATGAAAAAGCGTTCATCCTTT
TAAAAGTACTTTTCATTTTTTTAAATAATGATGTAAAAATATATCTTTTA
AAATTTCAGTTCATATCATTTCCTCTGACACTTTTTGCATTTCCATTCCA
CTGATTTGGAAAGGCTTTTTGATTTTTTTAATCCTTCACATTTAAAATGA
TACCATTGACGACATGAATCACAGAAGGCCATTGAGTCTTTATCTGGGAA
ATAGGGTTTTCGACATTCACAGTAAAGGGGTACAATATGTCTTTTTCTAT
TACATTTTCGCACCCTCTTTGTGATTGTTGGGAACAAAGTCATTTTCTCA
TTTTGGAGACAAGAAATGAGATGTTCCCTCATTCTTTGCAAATCAAATGT
AGTTGTTGTAGGATCTTTGTTATGAGCCAACAATGTAGCAAAAGCAATAG
CAAAGACCCCACAATCAACACCATTGGTTTGTTGCTGGACCGGTTGTACT
TCAAGCCTGATGTTGTCTTCTTCACAGTGAGAAAATGATGCAATTGTACT
TTTGATCTCATCAGAAAGTGTTTCCCCAACCAGACTATCATAAATAGCAT
GACATTGGTTATCTGTTTTTTCTTTCAATGATAGTGATGAAACACATACC
CAATGTAAATTACCCAAATTGACAATTTGGAGGTAGTGGTTGTTTGATGG
AATCACATCCTGCATGTTCCATTTCAGCAAACTTGTATCAAACAAACCAC
CAAGATGAGGAAACTCCTTTTTGAGATACTGCTGAGCCAAATTGATTGAC
TCATCAGTAAGCATTTGATCATTACGAATGAGGTTAATTTCACGAGTTGT
CAATTTGATTTTCCTAGTTTTTTTTGGTACTCCATGTGCCGGTTTGTTGA
GAGTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTATGATAGCTGCATTG
ACAATGCCTATTTAAATAGTTTATCAACAACTGTTACTTACTCTTTATAT
TTTTCAGGAAGAAATTTGCGTGTCAATGTAGTCAACATACCAGAAACTGA
TTTGTCATTGGCCTGTTTAAGGTATTCATATTTTAAATCTCTATTTTTTC
GCTCAACCCCGTTGTTGGTATTAATTTCGATTGACAACAAGTCCTTTCTG
TAACAATAAACCCATCTCTGAGAAAAAATTAAAAAATGAATGGATTAGCT
AAGTTAGTTCCTGCAGATAAAATTCTATACCATAACAAATACCACATTAA
CATTGTGCAAGACACAAAAACTAAAAAGTGTATTGATCTTTAGAATTTTC
CATGCTAAATGACCACATGATCTTAAATTTCAACCTAAGCCAGTTCAAAT
CTTCTAAATGAAATTTACTCAATACCTTGCAACAAGGGNCTGAGCCAAAT
TGATTGACTCATCAGTAAGCATTTGATCATTACGAATGAGGTTAATTTCA
CGAGTTGTCAATTTGATTTTCCTAGTTTTTTTTGGTACTCCATGTGCCGG
TTTGTTGAGAGTGATTACACAATCATCTGATGCATTACCAGTTAAATCTA
AAATTACAGGGATACAGGGTCTGTTTTTTAATCACTTTATCAACTTGGTT
ATGAGCAAAAGATCTTGTAGTTAAAAAGGTAGGCTCTCAGATTTACTAAA
TAACAGGATAGTAAGGCAGTTAAAAGTTTCAATTTTAATAAAAATACGCT
AAAAATTATTAAAATCTTAACTGTCTTGAAAAAGTACAGTACAAGAATTA
GGAGATTGATATTTTTGAAATAGAATCACTGGCAATGACTTGAGTTAAAT
TATCAAATACTTTTTTAGATAGCTATATATATCTGGATTAAGATTATTTT
TTTATGCCTGAATCCCTTTAACGTTGAATCACTGTTCTCTTTTATTTTAT
TGTTTACCTTCAAAATGAGATATACCAACTTCACTGTTTTCTTTGCTAGT
AAGGCATTCTATAAAAGCAAATACAGAAAATCTCATGAGTGTGACTGTAA
AATAAAGGCTGTTTAAGGGGAAATATTTAAATGATTTTCAGATGATGAAA
TTCGTTTTACGTATATACCACAAATGCAGTTTTATATCTTTATTGAGGTA
TTACTCCTATTTCAGGGCAGGGTACCCTCAACTGTTAAAATTTGATTTAG
GAATAATTCCTTACCATTTGCTTTTTTTGGCTTGGCATCAGATATAAAGA
GTGTTTGTTCATTTTGATTTGTAAGTGGAACATCATAGGTGCATGGTATT
GTTAAATCGATTAGTTCTGTTTCAACCTTGATTAAGAAGAAAAGCAAAAA
TTTGAAATGTTTCTGTTTTTCCTTGTTCAAGTTGTAATTAAGCCTACACC
ACATCGGGTAAAAGTTTTCAGGTTTTATGTAGATATTTATGAAATGTACA
AGGGCTGCTGTTGATTTCAAATTTGATAATGTAACAATATTATTATGATA
ATGTCTTATTAACAATTTTACCTTTTTAATCTTCGACTTCTTTGGTGCAA
CATTTAAAATAGCTGCTTTACGTTTCTTTTCAGCTCCTTTACCAACTCTA
CCTGCTGCAACATGTTTTTTGGGTTTTTCTTTTGGAAGATCTTCAAATTT
ACATTTGGACGTGACAAGGTTTTTTTCTTCATGAACTAGTCCAGAACTCT
TGGGAGCGACTGATCTCAGCATGTTTCTGATTTCTCTCAGTTTTATTTCC
AAATCTTCAGCAATCTTAAATAAACATATTTAATCTATTTAGGATGATAT
TTCAAAACCTGAAATCTGAAGGCTGAGTGTCCACTGAAAANNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTGGTACTTACACTTTCATCA
GTAACCAAGTATGTCAGTGACTTGATTTCGTTTAAGTGCTCTCTGCATTC
TCCAAATTTAGATCTTGATATCTTCATTCTTTTAGGCAAATCAACTGTTG
GATGTTCTTGAACAAACTCTGACTCTGAATCAAAAGATAAAGTTTCTTCC
TGTTCTGGAGTTTCATTTTTGCCAACCGGTGTTGAAGTGGACGTTTTTGA
AATCAAGCGTTTTATATCTCCAACAACTGCCTCATCCAATGTCATGTAAA
CTGAATCCCGGTAGGTCTTTGGAAAAGTATCCCATGTCTCCTTTGTGTGT
AAAATAATTGCGAACATGTGCTTACATGGCAATTTTGTTTTTCTCCAAGA
AAAGCAATCACAATGTGGTTTGCGAAGGTCAACTGAATAGGATACATCAT
TTTCAAAACTTTGAATTCTGTAGATGTTTTGTTGCTCCTCAATCCTCGTC
TTATTGATATCCAACACATTTGCTATGAGCAGTTTGTTTCGACAGTGTTG
GACAAGATAGCGTGGTCTGTTATGTAGATATTGGGGAATGTATTTACTAT
ACCCTCGGTGAAGGGAAGAACATACCAAATTTTTGTCCTTGTACCTTAAA
CAAAAGTTGAAATTAATCAATCATGCAAACATAATTCAACTCAAAGTAGG
TTTTAAATTCTTTGGTATTCCTACAAAGATCTTTCCATTTAGGCAGCTGA
AGATTTAAAAACTAAGAACTGAACAAGAAATTACTATTCATTTCTCTATG
ATAGCTGCATTGACAATGCCTATTTAAATAGTTTATCAACAACTGTTACT
TACTCTTTATATTTTTCAGGAAGGAATTTGCGTGTCAATGTAGTCAACAT
ACCAGAAACTGATTTGTCATTGGCCTGTTTAAGGTATTCATATTTTAAGT
CTCTATTTTTTCGCTCAACCCCGTTGTTGGTATTAATTTCGATTGACAAC
AAGTCCTTTCTGTAACAATAAACCCATCTCTGAGAAAAAATTGAAAAATG
AATGGATTAGCTAAGTTAGTTCTTGCAGATAAAATTCTATATCATAACAA
ATACCACATTCACATTGTGCAAGATACAAAAACTAAAAAGTGTATTGATC
TTTATATAGAATTTTCCATGCTAAATGACCTTAAATTTCAACCTAAGCCA
GTTCAAATCTTCTAAATGAAATTTACTCAATACCTTGCAACAAGGGAACC
AGGTAGTCTCTAACCAGCTTCGAAGCTTTGATGAACCTTCATCATTCCAA
ATGTCGCTTGATTTTAAAATTTCAATCCGAATCTTCATCTCCTCCTCTGT
TTCTGAACTCGCTATCGGCCGAAGCATTTGTAAAACGACATCCCTCTTTG
TCAACCCCTTCCCATCATTCTCATCATCATCTTCCTTGCCATACATTTTC
CCAGTCATTCCATGCTTCGTTTTGCTCAGCCATCGTTCCCAAGCCTGTTC
TCGATGAAAATCGCATAGTAAGATGATCGTATCTAAAGAAATTGAAACAA
AACTCTTTGCCAGTTTTAAAATTATTAAATCATTAAGTTTCATAATACCA
TTATGTTATGCTCAATTTTTCATACACATGTATACAGGTAACAGGTAAAG
TGAATAGAATGAAAAACAAATAAANATATCTGGATTAAGATTATTTTTTT
ATGCCTGAATCCCTTTAACGTTGAATCACTGTTCTCTTTTATTTTATTGT
TTACCTTCAAAATGAGATATACCAACTTCACTGTTTTCTTTGCTAGTAAG
GCATTCTATAAAAGCAAATACAGAAAATCTCATGAGTGTGACTGTAAAAT
AAAGGCTGTTTAAGGGGAAATATTTAAATGATTTTCAGATGATGAAATTC
GTTTTACGTATATACCACAAATGCAGTTTTATATCTTTATTGAGGTATTA
CTCCTATTTCAGGGCAGGGTACCCTCAACTGTTAAAATTTGATTTAGGAA
TAATTCCTTACCATTTGCTTTTTTTGGCTTGGCATCAGATATAAAGAGTG
TTTGTTCATTTTGATTTGTAAGTGGAACATCATAGGTGCATGGTATTGTT
AAATCGATTAGTTCTGTTTCAACCTTGATTAAGAAGAAAAGCAAAAATTT
GAAATGTTTCTGTTTTTCCTTGTTCAAGTTGTAATTAAGCCTACACCACA
TCGGGTAAAAGTTTTCAGGTTTTATGTAGATATTTATGAAATGTACAAGG
GCTGCTGTTGATTTCAAATTTGATAATGTAACAATATTATTATGATAATG
TCTTATTAACAATTTTACCTTTTTAATCTTCGACTTCTTTGGTGCAACAT
TTAAAATAGCTGCTTTACGTTTCTTTTCAGCTCCTTTACCAACTCTACCT
GCTGCAACATGTTTTTTGGGTTTTTCTTTTGGAAGATCTTCAAATTTACA
TTTGGACGTGACAAGGTTTTTTTCTTCATGAACTAGTCCAGAACTCTTGG
GAGCGACTGATCTCAGCATGTTTCTGATTTCTCTCAGTTTTATTTCCAAA
TCTTCAGCAATCTTAAATAAACATATTTAATCTATTTAGGATGATATTTC
AAAACCTGAAATCTGAAGGCTGAGTGTCCACTGAAAANNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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CTTGTGATTTTACTTCTAACGCGTGAATGTAAAACTTAGAATTGTGAATA
TTACCTGGAAAAAGGGCTTGCAAAGCATCTATTTCCTCTTGACAATAATC
CACCATCATAACTTTGGGGTTCCATTCTGGATTCCATTCTTTTAATTTGG
CAAGTCCTTCGAGGATTGATTCTGTCGTCTCATCTTGGATAGCAAATGAG
CCTATCACTTGATAGTCCACATTTGTTTTTGTGGCAACAAAGAACAACGG
TAGCCTATATTTTGTGGTTTTGTGGGTGGCGTCTAATAGGCCGATCTCGT
TCCCGTACCGCTTCATTAACCGTTTTTCGTTTGGATTTTGGTGGACAAAT
AGCAATCTTTGTTCTTTCTGATTTGTAAGCACATCAATTAGCTCGGCATT
TTCGTTATAAATTTTAGCACCCTCTCCTTCCCCGTAGCTTCTAAAAAAAA
TCTTTTCGTTTGGGTTTTCAGCTCGCCATTTCTTTATGAGTTCGATGACA
TTGGCTTGGTCATTTTTTGAGAACCTGTTTTTCATTTTCACTTTATTTAT
GTGGGCCCTTATGTCACTTTTTTTGGGGTAGAAGCGTCTGTTATTCTCAT
TCGGTAGTTCCTTGCCCTTGAACAGATCATTCTTTACATAGAGCTCGAGG
AGCGTTTTTACTTGAGCAGGTCTTCGAATACCATCCTTTGCTAATGATTC
GATCTGTTTGATGATATCCGGATCGAGACGCTGCGAAAGGCCTCCAAGCT
AAAATAAAACAAAAGAAAGAAGGCATGTTTTTTATTGTCAATATTCAATC
CGATTTCCTTTTAAAATGAGGCGCATTATATATTCTTTGTCGTCGCAATG
TACGTTGAATGGAACATATTATACCTCTCCAACATAATGACCAACGTGTT
TATTTTCGTGTGATATTTCGGTTACAAACAACCTTTCTAGCTCTGGACAT
TCTCCTTCTTCAAGCAAACCTCTCAACGTCTTTGATACTTGCTTTTTCTT
GTGATCTGATGCTTCAAGATCGACCTAAAATAGTATTATATGAATTTAAT
AATTAAAAGTTTTGGGTACGGAATTAATAATCGATATCATCATTTTTCAC
TCAGACAATAATGAACTAGACGAGATTCATTGTGATATACCTTGTATTCT
GGAAAGTATATAATATCTTTTATTGTCAGCCGAGCCGGACAACCAGTCTT
CATTGTATCTTGGATGTAATTTCTAGATTTCTTCATGGTAGGATGTTCTT
GGTTGGCCTGAAATTAGGATTGACTTGTCATTTTTTCAGTGAATGATATT
GTAGTGTTGTATTTTGCTACAACAAATGCTTCTACGTAACAATTAGTAAA
AGGGATAATCACCCCTTTAAATTATCTATTTCTGTCATTTTTGTCATGTT
CTTACCTCTTCTATTTTTTTTTGCTTTCTTTTCTCTTTATGTGATTTGTT
GAAGTCCTTCCCATGCGCACAGAACAAATTGTACGAAGCATTGATGACAA
AAGGAGTTCCGGAGAAAGGTACGATTTCGTTTTTAGAGGATCCTTTCATG
GACCAGTACACTTTATGTTTCTTCTTTAAATCGATTTCATCTTCAAAAAA
AGATAACCTTTAGTTAACTATCAAGAATACAAACGTTTTTATTTTCACAA
GAAAAGCTTCTATCCAGTAAACAGCCCCTCTGGTCTTTTTTTCCTACAGG
TTTGCTTAGCTCCCTATCTGGCGCAAAAGATCTCATAATATATCAAACTT
TTTATTCTATATGCGTGATAAATAGTAAAGTAGATACCTCCTCCAAAGCC
TTTTGTTTTTTCATATTTTGAATATTTAAAGCCAGAATTTATTTCATATG
ATTTTATCTCTTTGTAGGTATCTTCCAAAGTTGATGATCGCAGTACGATA
TCGTCTCCAGCTAAACAAGGAAACTTTGTGAAAGAATATTTTTGCTAAGA
CCGTGGATGGACCTTCTAAACATGTTGAAGTTTTAGTAATTTAGCTACAT
CCTTGTTATAATCAATCAAATTATAAAGATGATGCGTACTAAAAATTTAA
AACACAAAACATTTTCTTGAACGATATTTCAATCNGTTTGCTACAACAAA
TGCTTCTACGTAACAATTAGTAAAAGGGATAATCACCCCTTTAAATTATC
TATTTTTGTCATGTTCTTACCTCTTCTATTTTTTTTTGCTTTCTTTTCTC
TTTATGTGATTTGTTGAAGTCCTTCCCATGCGCACAGAACAAATTGTACG
AAGCATTGATGACAAAAGGAGTTCCGGAGAAAGGTACGATTTCGTTTTTA
GAGGATCCTTTCATGGACCAGTACACTTTATGTTTCTTCTTTAAATCGAT
TTCATCTTCAAAAAAAGATAACCTTTAGTTAACTATCAAGAATACAAACG
TTTTTATTTTCACAAGAAAAGCTTCTATCCAGTAAACAGCCCCTCTGGTC
TTTTTTTCCTACAGGTTTGCTTAGCTCCCTATCTGGCGCAAAAGATCTCA
TAATATATCAAACTTTTTATTCTATATGCGTGATAAATAGTAAAGTAGAT
ACCTCCTCCAAAGCCTTTTGTTTTTTCATATTTTGAATATTTAAAGCCAG
AATTTATTTCATATGATTTTATCTCTTTGTAGGTATCTTCCAAAGTTGAT
GATCGCAGTACGATATAGTCTCCAGCTAAAGGAAAGGAAACTTTGTGAAA
GAATATTTTTGCTAAGACCGTGGATGGACCTTCTAAACATGTTGAAGTTT
TAGTAATTGAGCTACATCCTTGTTATAATCAATCAAATTATAAAGATGAT
GCGTACTAAAAATTTAAAACACAAAACATTTTCTTGAACGATATTTCAAT
CCTCTCAGACATTTATCAAGTTTCTTGTTATAATTGAAAAATCGACCCAT
ACTTACTTTGATTTTCGTTGGCGTCACTAGTAAATCTTGTTGATGAACCT
TGTTCATTGCTCTCACTCCTGAAAATAAAGTGATATAGAATTACTATACA
TTACCGAATTATTAGATAATCACCTTGGGATGATCCAACTTTTAGTATGT
GAAGATCACTTCCTCCCTCGACTTATTACAGCTCGATTGATTTAGACTAA
CCACTGTTTTACGATCATACCTGTCATGGAAGTTATTGTCCGTGTGCTCT
GGTTCAAAAGATTTTTTTCTAAAGGCTATATTTTTAACACCATCTTCAAT
GTCTGATTCATCCGATTCCGAATCTGTTTCTGAAAATATTGAACATTCTT
TCTCTGCATTTGTGTCTTCGATTTCAGCGTACACATCCAAGTTAACAAGT
TCTTCATCTTCTTCGATCTCCACTAAATTTATAGGAGTAGTACGAAAAAT
TTATTACTTGCGTTTAGACAGCTAAAACTAAAGGGCCACCACCTACGTCA
CTACCTTTTCTTGTATTGCGAAATGTTTTGCGGATACAATCGGAGAATGG
AAACATTCGAAAAAGTAGAATTTGAACCATTTTTAATTGAAAATTTTGTA
ATTGTTCAAAAAATTGTGAGTAGTTCGAAAAGGTTCGAGTAAGACATAGC
TAGATTATTTACATCGTTTTTCAAATTTGTATTTATTAGTTTACTATATT
AACTAGTCTAAAAAGATCTTTAACCGAAATATGCG

Coding sequence (CDS) from alignment at sc0000317:96530..110964-

>TCONS_00019032 ID=TCONS_00019032|Name=TCONS_00019032|organism=Clytia hemisphaerica|type=CDS|length=2055bp|location=Sequence derived from alignment at sc0000317:96530..110964- (Clytia hemisphaerica)
TCCTTCCCATGCGCACAGAACAAATTGTACGAAGCATTGAGAAGGAATTT
GCGTGTCAATGTAGTCAACATACCAGAAACTGATTTGTCATTGGCCTGTT
TAAGGCAAATCAACTGTTGGATGTTCTTGAACAAACTCTGACTCTGAATC
AAAAGATAAAGTTTCTTCCTGTTCTGGAGTTTCATTTTTGCCAACCGGTG
TTGAAGTGGACGTTTTTGAAATCAAGCGTTTTATATCTCCAACAACTGCC
TCATCCAATGTCATGTAAACTGAATCCCGCTCCTTTACCAACTCTACCTG
CTGCAACATGTTTTTTGGGTTTTTCTTTTGGAAGATCTTCAAATTTACAT
TTGGACGTGACAAGCTAAGAAGGAAATCACAGAAGCTGAATGAAGGTTGG
TCAACAGTAAGTCCTTCCCATGCGCACAGAACAAATTGTACGAAGCATTG
AGAAGGAATTTGCGTGTCAATGTAGTCAACATACCAGAAACTGATTTGTC
ATTGGCCTGTTTAAGGCAAATCAACTGTTGGATGTTCTTGAACAAACTCT
GACTCTGAATCAAAAGATAAAGTTTCTTCCTGTTCTGGAGTTTCATTTTT
GCCAACCGGTGTTGAAGTGGACGTTTTTGAAATCAAGCGTTTTATATCTC
CAACAACTGCCTCATCCAATGTCATGTAAACTGAATCCCGCTCCTTTACC
AACTCTACCTGCTGCAACATGTTTTTTGGGTTTTTCTTTTGGAAGATCTT
CAAATTTACATTTGGACGTGACAAGCTAAGAAGGAAATCACAGAAGCTGA
ATGAAGGTTGGTCAACAGTAAGTCCTTCCCATGCGCACAGAACAAATTGT
ACGAAGCATTGAGAAGGAATTTGCGTGTCAATGTAGTCAACATACCAGAA
ACTGATTTGTCATTGGCCTGTTTAAGGCAAATCAACTGTTGGATGTTCTT
GAACAAACTCTGACTCTGAATCAAAAGATAAAGTTTCTTCCTGTTCTGGA
GTTTCATTTTTGCCAACCGGTGTTGAAGTGGACGTTTTTGAAATCAAGCG
TTTTATATCTCCAACAACTGCCTCATCCAATGTCATGTAAACTGAATCCC
GCTCCTTTACCAACTCTACCTGCTGCAACATGTTTTTTGGGTTTTTCTTT
TGGAAGATCTTCAAATTTACATTTGGACGTGACAAGCTAAGAAGGAAATC
ACAGAAGCTGAATGAAGGTTGGTCAACAGTAAGTCCTTCCCATGCGCACA
GAACAAATTGTACGAAGCATTGAGAAGGAATTTGCGTGTCAATGTAGTCA
ACATACCAGAAACTGATTTGTCATTGGCCTGTTTAAGGCAAATCAACTGT
TGGATGTTCTTGAACAAACTCTGACTCTGAATCAAAAGATAAAGTTTCTT
CCTGTTCTGGAGTTTCATTTTTGCCAACCGGTGTTGAAGTGGACGTTTTT
GAAATCAAGCGTTTTATATCTCCAACAACTGCCTCATCCAATGTCATGTA
AACTGAATCCCGCTCCTTTACCAACTCTACCTGCTGCAACATGTTTTTTG
GGTTTTTCTTTTGGAAGATCTTCAAATTTACATTTGGACGTGACAAGCTA
AGAAGGAAATCACAGAAGCTGAATGAAGGTTGGTCAACAGTAAGTCCTTC
CCATGCGCACAGAACAAATTGTACGAAGCATTGAGAAGGAATTTGCGTGT
CAATGTAGTCAACATACCAGAAACTGATTTGTCATTGGCCTGTTTAAGGC
AAATCAACTGTTGGATGTTCTTGAACAAACTCTGACTCTGAATCAAAAGA
TAAAGTTTCTTCCTGTTCTGGAGTTTCATTTTTGCCAACCGGTGTTGAAG
TGGACGTTTTTGAAATCAAGCGTTTTATATCTCCAACAACTGCCTCATCC
AATGTCATGTAAACTGAATCCCGCTCCTTTACCAACTCTACCTGCTGCAA
CATGTTTTTTGGGTTTTTCTTTTGGAAGATCTTCAAATTTACATTTGGAC
GTGACAAGCTAAGAAGGAAATCACAGAAGCTGAATGAAGGTTGGTCAACA
GTAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010667XLOC_010667Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019032-exon-sc0000317-1575043694:110916..110964TCONS_00019032-exon-sc0000317-1575043694:110916..110964Clytia hemisphaericaexon
TCONS_00019032-exon-sc0000317-1575043694:105647..105731TCONS_00019032-exon-sc0000317-1575043694:105647..105731Clytia hemisphaericaexon
TCONS_00019032-exon-sc0000317-1575043694:104105..104279TCONS_00019032-exon-sc0000317-1575043694:104105..104279Clytia hemisphaericaexon
TCONS_00019032-exon-sc0000317-1575043694:103482..103545TCONS_00019032-exon-sc0000317-1575043694:103482..103545Clytia hemisphaericaexon
TCONS_00019032-exon-sc0000317-1575043694:97882..97945TCONS_00019032-exon-sc0000317-1575043694:97882..97945Clytia hemisphaericaexon
TCONS_00019032-exon-sc0000317-1575043694:96530..97532TCONS_00019032-exon-sc0000317-1575043694:96530..97532Clytia hemisphaericaexon
TCONS_00019032-exon-sc0000317-1510915933:110916..110964TCONS_00019032-exon-sc0000317-1510915933:110916..110964Clytia hemisphaericaexon
TCONS_00019032-exon-sc0000317-1510915933:105647..105731TCONS_00019032-exon-sc0000317-1510915933:105647..105731Clytia hemisphaericaexon
TCONS_00019032-exon-sc0000317-1510915933:104105..104279TCONS_00019032-exon-sc0000317-1510915933:104105..104279Clytia hemisphaericaexon
TCONS_00019032-exon-sc0000317-1510915933:103482..103545TCONS_00019032-exon-sc0000317-1510915933:103482..103545Clytia hemisphaericaexon
TCONS_00019032-exon-sc0000317-1510915933:97882..97945TCONS_00019032-exon-sc0000317-1510915933:97882..97945Clytia hemisphaericaexon
TCONS_00019032-exon-sc0000317-1510915933:96530..97532TCONS_00019032-exon-sc0000317-1510915933:96530..97532Clytia hemisphaericaexon
TCONS_00019032-exon-sc0000317-1491911889:110916..110964TCONS_00019032-exon-sc0000317-1491911889:110916..110964Clytia hemisphaericaexon
TCONS_00019032-exon-sc0000317-1491911889:105647..105731TCONS_00019032-exon-sc0000317-1491911889:105647..105731Clytia hemisphaericaexon
TCONS_00019032-exon-sc0000317-1491911889:104105..104279TCONS_00019032-exon-sc0000317-1491911889:104105..104279Clytia hemisphaericaexon
TCONS_00019032-exon-sc0000317-1491911889:103482..103545TCONS_00019032-exon-sc0000317-1491911889:103482..103545Clytia hemisphaericaexon
TCONS_00019032-exon-sc0000317-1491911889:97882..97945TCONS_00019032-exon-sc0000317-1491911889:97882..97945Clytia hemisphaericaexon
TCONS_00019032-exon-sc0000317-1491911889:96530..97532TCONS_00019032-exon-sc0000317-1491911889:96530..97532Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019032-proteinTCONS_00019032-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000317supercontigsc0000317:96530..110964 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	1.98223	1.61728	1.86183	2.12107	1.83828	0.949593	0	1.38901	1.08746	1.1334	0	0	0	0	0	0	0	0	0	0	2.15626	2.62936	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00019032 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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