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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019014 ID=TCONS_00019014|Name=TCONS_00019014|organism=Clytia hemisphaerica|type=transcript|length=1506bp
TTGTGTACAAACGAAGAGGATTTACACAAGGAATTGAAATATATCGAAAA
AACAATGCAACTTAATGATTTCCCAAATAATGTCGTTAAGAGAACCATAA
AAGAATCTCTTAAACCAAACGAGAAAAAGAAAGTTCGAGATGATAATGag
gaaaatatgataaaaatgtatttgCCGTACGAAAAAGGTATATCAGagaa
aatttcagctaaaagtAAACATTATAACGTAAAATTGGTCAATACAAAAG
GAAAAACGTTGGGCGATGCATTGAAagtaaaaacaaatgataatgTAGAA
ACACAAGATATGTCAGGAGTAGTGTACAAAGTAAACTGTAAAGACTGTGA
GAAATATTACATCGGAGAAACGGGAAGAACGATTGAAACGAGAATGAAAG
AACATAAACAAGGTGTAAACGGGGAGCAAGAAAAGGTATCTGGTTTGTCT
CAACACTTGAAACAAACCAATCACGAGGCAGAGTTTGATGATgtaaaagt
actttttagagaaaggaatttcaaaatgagaaaattcaAAGAGGCACTTG
CAATTAAGGAACACAAAACTAATttactaaataaaaaagaagaaattaaa
cttttatccaaaatcttttataatcattttattgtcttttattAATGGTT
TTATTGTTCATAAGAAtaacttaattaattttttatctagggaataaaaa
taattttttaatcaaatgtcTGAAGATGCTAGATGTTATATGataggttt
ttttttatgaGTTATAGATCTGAAGATGCTCTACCCTAGAGTAGggagaa
aatttatcaataaataaataaacttttgttgtttcttgcctGTGACCCAT
CCAAATACTCAAGTTTTAACTGTTATGTCCCCTTTtaagattttctttct
ttttctgtaTCACCATTTCGAACAGCTCTATTATGTTCTTTGTATCCGAC
ACCGAAAGATCTCTTAGACTCACCGATATATGTAGCATTACAGTCTTTAC
AAGGGATTTTGTATACGATATTGTTCCTTTTGTTCATAGGAAGTGTGTCT
TTAAGTTTCGATAATAGTCTTCTCCAATGTATCAGTGGGATAGAAAGTAC
ACTGTATGTTATGAGGTGCGAGTGTTCTTTTGATCATTTCACTTGTTCCT
GCAATATAAGGTAACTTGGGCCTAATTGGACTTGAGTCCCGAGTGGGAGG
GTCCCGAAAACATGAACTAAAACTTGGCGTATTGTATGTTTTGTATATTT
CTAGTTCTGTCCCAAAATATTGATCAAACTAAAATTAGAATTACCTGAAT
GAAATTATATAATGTACTTTTAGTTCCGTCCCGAAAAAGCTTACGAAAAG
GTTGGTTTCGGGACAGTTCCGAAGTCCACTATGAAAGGATTTATTTTGGG
ACTGAAGTAAAATTATATATAGTAACTTTgagtttctttttcaaaatatc
aaatttcatttaaattcttttgGGACTGAAGTAAAAGTATATTATATAGT
AACTCG Run BLAST on NCBI protein sequence of TCONS_00019014-protein >TCONS_00019014-protein ID=TCONS_00019014-protein|Name=TCONS_00019014-protein|organism=Clytia hemisphaerica|type=polypeptide|length=214bp
LCTNEEDLHKELKYIEKTMQLNDFPNNVVKRTIKESLKPNEKKKVRDDNE
ENMIKMYLPYEKGISEKISAKSKHYNVKLVNTKGKTLGDALKVKTNDNVE
TQDMSGVVYKVNCKDCEKYYIGETGRTIETRMKEHKQGVNGEQEKVSGLS
QHLKQTNHEAEFDDVKVLFRERNFKMRKFKEALAIKEHKTNLLNKKEEIK
LLSKIFYNHFIVFY Run BLAST on NCBI transcript from alignment at sc0000314:124983..126488 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019014 ID=TCONS_00019014|Name=TCONS_00019014|organism=Clytia hemisphaerica|type=transcript|length=1506bp|location=Sequence derived from alignment at sc0000314:124983..126488 (Clytia hemisphaerica)
CGAGTTACTATATAATATACTTTTACTTCAGTCCcaaaagaatttaaatg
aaatttgatattttgaaaaagaaactcAAAGTTACTATATATAATTTTAC
TTCAGTCCCAAAATAAATCCTTTCATAGTGGACTTCGGAACTGTCCCGAA
ACCAACCTTTTCGTAAGCTTTTTCGGGACGGAACTAAAAGTACATTATAT
AATTTCATTCAGGTAATTCTAATTTTAGTTTGATCAATATTTTGGGACAG
AACTAGAAATATACAAAACATACAATACGCCAAGTTTTAGTTCATGTTTT
CGGGACCCTCCCACTCGGGACTCAAGTCCAATTAGGCCCAAGTTACCTTA
TATTGCAGGAACAAGTGAAATGATCAAAAGAACACTCGCACCTCATAACA
TACAGTGTACTTTCTATCCCACTGATACATTGGAGAAGACTATTATCGAA
ACTTAAAGACACACTTCCTATGAACAAAAGGAACAATATCGTATACAAAA
TCCCTTGTAAAGACTGTAATGCTACATATATCGGTGAGTCTAAGAGATCT
TTCGGTGTCGGATACAAAGAACATAATAGAGCTGTTCGAAATGGTGAtac
agaaaaagaaagaaaatcttaAAAGGGGACATAACAGTTAAAACTTGAGT
ATTTGGATGGGTCACaggcaagaaacaacaaaagtttatttatttattga
taaattttctccCTACTCTAGGGTAGAGCATCTTCAGATCTATAACtcat
aaaaaaaaacctatCATATAACATCTAGCATCTTCAgacatttgattaaa
aaattatttttattccctagataaaaaattaattaagttaTTCTTATGAA
CAATAAAACCATTaataaaagacaataaaatgattataaaagattttgga
taaaagtttaatttcttcttttttatttagtaaATTAGTTTTGTGTTCCT
TAATTGCAAGTGCCTCTTtgaattttctcattttgaaattcctttctcta
aaaagtacttttacATCATCAAACTCTGCCTCGTGATTGGTTTGTTTCAA
GTGTTGAGACAAACCAGATACCTTTTCTTGCTCCCCGTTTACACCTTGTT
TATGTTCTTTCATTCTCGTTTCAATCGTTCTTCCCGTTTCTCCGATGTAA
TATTTCTCACAGTCTTTACAGTTTACTTTGTACACTACTCCTGACATATC
TTGTGTTTCTAcattatcatttgtttttactTTCAATGCATCGCCCAACG
TTTTTCCTTTTGTATTGACCAATTTTACGTTATAATGTTTacttttagct
gaaattttctCTGATATACCTTTTTCGTACGGcaaatacatttttatcat
attttcctCATTATCATCTCGAACTTTCTTTTTCTCGTTTGGTTTAAGAG
ATTCTTTTATGGTTCTCTTAACGACATTATTTGGGAAATCATTAAGTTGC
ATTGTTTTTTCGATATATTTCAATTCCTTGTGTAAATCCTCTTCGTTTGT
ACACAA Coding sequence (CDS) from alignment at sc0000314:124983..126488 >TCONS_00019014 ID=TCONS_00019014|Name=TCONS_00019014|organism=Clytia hemisphaerica|type=CDS|length=645bp|location=Sequence derived from alignment at sc0000314:124983..126488 (Clytia hemisphaerica)
TTaataaaagacaataaaatgattataaaagattttggataaaagtttaa
tttcttcttttttatttagtaaATTAGTTTTGTGTTCCTTAATTGCAAGT
GCCTCTTtgaattttctcattttgaaattcctttctctaaaaagtacttt
tacATCATCAAACTCTGCCTCGTGATTGGTTTGTTTCAAGTGTTGAGACA
AACCAGATACCTTTTCTTGCTCCCCGTTTACACCTTGTTTATGTTCTTTC
ATTCTCGTTTCAATCGTTCTTCCCGTTTCTCCGATGTAATATTTCTCACA
GTCTTTACAGTTTACTTTGTACACTACTCCTGACATATCTTGTGTTTCTA
cattatcatttgtttttactTTCAATGCATCGCCCAACGTTTTTCCTTTT
GTATTGACCAATTTTACGTTATAATGTTTacttttagctgaaattttctC
TGATATACCTTTTTCGTACGGcaaatacatttttatcatattttcctCAT
TATCATCTCGAACTTTCTTTTTCTCGTTTGGTTTAAGAGATTCTTTTATG
GTTCTCTTAACGACATTATTTGGGAAATCATTAAGTTGCATTGTTTTTTC
GATATATTTCAATTCCTTGTGTAAATCCTCTTCGTTTGTACACAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019014-exon-sc0000314-1491911889:124983..126488 | TCONS_00019014-exon-sc0000314-1491911889:124983..126488 | Clytia hemisphaerica | exon |
| TCONS_00019014-exon-sc0000314-1510915933:124983..126488 | TCONS_00019014-exon-sc0000314-1510915933:124983..126488 | Clytia hemisphaerica | exon |
| TCONS_00019014-exon-sc0000314-1575043694:124983..126488 | TCONS_00019014-exon-sc0000314-1575043694:124983..126488 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000314 | supercontig | sc0000314:124983..126488 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR000305 | GIY-YIG_SF |
Blast
The following BLAST results are available for this feature:
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