TCONS_00018916 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018916
Unique NameTCONS_00018916
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3448

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018916 ID=TCONS_00018916|Name=TCONS_00018916|organism=Clytia hemisphaerica|type=transcript|length=3448bp
ATCTGGTTATACTTTTATCTTTCAGAGCATAAAAAAGACACTAAAACAAA
GAGGAAAATGGAAGCAAGTCTTCTGCAACAAAAACTATCTGGTTTGAGAC
CAGAGCTCATCAACCAAAACAAATGTACCAACAAAACATCATTGCACCAA
AACATCTTGCGACACTCCCAAAGTGTACTACAGTCACAGCACAAGAAGTA
CAACCTTGGGAATGGTTACCATTGTGCAGACCCCCTGACGGCTGCTGAGT
ATCTACTCCAACGGGAATACGGTGAAACTTCCTTGTACGATCCAAAACAG
CGGGCACCTGTCATAATCCCACAAGTATTCAATTCAAATCAATATGCTAA
AAGCTCTCCGGTCAACATCCTTGATTACGAGATAGGAATGGCAACAATGC
AAAATACTTTGGAGAATCTGACCAATGAACGACCCGATTATTGGTTTACA
AAGGAAATGCAAGCATTTTATGACGAAAACGCGCAACAGGCGAGCAAGGA
TATcgataaaaagaaatttgatagATGGATTCTTCACTGTAAGATAATGC
ATCTTACCATTCAAGAGATTGGTGGTGGTGCAGCAACGTTGGACTTGCCG
TTACTAACAACTTCAGAAACTGAACCTTTTGCCAGAGCTTGTCTTGCAGA
GCTTGCTTCAAACTCACCACCATCATCATCCAAGTTAAAAAACATGCTCC
AAAGTAGTGTGGCAAACTTGcgtcgaaaaattgaaaatctgaTTAAGAGT
AATCCACCAACTGACCCTATAGCCTTATGGTATTTTGAATTGAACCTGGC
AGAATTAGGTGAAAATGCTGAAGATTGGTTTCGGAATCAATTTTTAGCAT
TACAATCCGATGAAATTCTTCACGATACTGTCATCCTACAATCTGCTAAA
TTCATGACTaacattaaaaagaaatttcatcAAGAGTTTGATTTCCTTCT
CCTCTCATGGACAAGAAAACTGATCATCGCTGTTGAAATCAAACGCCAAT
CGTCAGCAACAATGGATGCAATCGGACAGCTGGAGACTTACAAACAAATA
TTCGACGAGAAACTTGGTGATCAACTTGACAACTGGTGGACTTTCCTACC
AGTTATCTGTGTCGAGAAAAATCATCATAATCTCAATCAAACACAACACT
ACATTACCTTTCAAACTAACATCAAATCATGGCTTTTGGGGATTTTCACA
CAATATCCTGAATTACCATGCACCGTTTCATCGTTAAATCAAGTCAAAAA
TGTGTTAAGAATGATCATCTTCACAATCCACGTGTCAAAAAGTGCTCCAG
TAACCACCTCAAATTGGGTCGAGTATACGTCAAACGCCATCGAATCTATT
TCAACCgttgaaaatattgttttttattcCAGCACTcaaatgcatataat
gaatccCAACGAGCCACGCCTTCGAAAACTTCTCATCAGGGGTGGTTATG
GAACAGGAAAAAGCTTCTTACTGGAGGAGAAAGCAAAACAACTGAGCAGA
GATCCACATTACGCTGGCAACATTGTGTATGTTTGCTGGCGCGTTGAGCC
AACTAGTTTACTTGAATGGCGTTTGAANATGTATGTTTGCTGGCACGTTG
AGCCAACTAGTTTACTTGAGTGGCGTTTGAAGCTAGACTTAGAAGAAAAG
CATGGAGTGGGCATTATAGGATTGAATTACAATGCTGAGAAGGAAACACA
AGATTTATTGGTGCAAACAGTTCGTCAAAAAAAGGTGAAAGCATTATTTT
TTGACGAGTGGAAAGAACAACAATATCACGACTTCTTCTCTTGGATGCTA
AACGAAACAGTTTTCCAAAGTCTTGAAATCATATGGATCGCTTTTCAAGG
TGGAAAGAGTGCTCACACCGAAAAAGCATCCCAACAATTTACGTTGCTTG
ATCTTTCTACTAATTTCAGGAACAGTAGAGAGTTGGTCAAGGAGGCTAAA
AATGTTGCTGACAAGAAACACTACAAATACAAAAGTGGGTTGGTTTTGCC
TCCCCCCATGTTCCCAAGTGGGCGTCCGCCCATTTACGTGAATTCCTTTG
AAAATGCAATCAAGGAAATGCGAAAGTTGTCACAATCAGGGATCTTGGTG
ATCGCTGATATGAGAACCGATGGCGAGCATTGGGGAGAGCAAACTGTAGT
CCTAGATAAAATGAACGAAGAATGGAAAAGATACGATTTCACTGATAAAG
ATTTCAGGGCGAAGGAAAACCCTTATGAAGTTCTCAAAAACGGTAACATC
TTGCTGACCGACTGTTTGTTTATCCAAGGATTTGAATGGGTGAATGTGGT
TTCATTCCGCGAAGACGCGAACTACATTGATTATCATGATTGTAATTATT
TCATGCGCTGCAACACAAACCTTGTTGttattgataaaatttaaaacCGT
TTACAGCTCATTTACAATACAGTTGACTTTCGCTAATTCGAATTCGAACG
GGGAATTAGatttgttcgagttacagagagattcgaattgtaGAAAGTAT
TTCAAGATGGATACTCCTGGAAATAAGTTCTAAGAATAGAAGTTCGAAAA
ACGAGAGTTTAATGTATTAATTTATCGTTATCTATGtaatatttttgtct
attttctaaACAATTCCTCAATTTAAATTTCAAGTAGCTAAACTTGATAG
CCTTTCAGGGAAATCTCTACCAGGAAAATATGACGAAATTTTAGCTAACT
GGTGAAAAACATCCCGGTCAGTTTTAACGAAAATTTTTAGAAGTGACGAA
TACTTGGCACCGCGAACAGCGAATAGAATGTTTCAAATTctattaaaaac
aaatatttataATATTACGTTGTAACACTTTCTGCTTTGCCAGAAGTTCA
GAAAATGTTAAAGCGGTTCACAAATTTGTAAAGCTCGAAACCTttctttt
caaagcaaaatAATCATTTTAAAACCAAATCGTTAAGTTTAGTTCTTCCT
GTTTAGGGATTCATTCTGACCCATTAAGGGGGTGAAATAACAATTGGTAT
AAAGTGGAAAGTTAGATAATACATACCGGATCATACCCAGACTCATTTCG
TCGACAGTTGCAGCTTCACTTTTACCACGTGGCGTTGGTTCTGTATCGAA
AATGACATGCGCACAGGGCATGTGCCAAAACTGAAACGAGAAGAACAAAA
CattgtatttattttatttgcaCGTAAAAAACATGtcttttaacttttaa
ttttgatgacttacacttataattttttatataatgCAGTATATTTTAAG
ATTGATAAAAACTTGTATTCGTCCTGACTTTTAACATTCTTGTTCCATTC
TTTGAATCTAGAAGACACTCGAGATGCATCAATTTGGagtaattttcttt
ttacttttttcttcttggGATAATTTGGTGATTTAACTGAATTCAATTTT
CTTCTAACGTAAACGTAAAATATTGCCGCCCAAGTACTTCTTCACATG
Run BLAST on NCBI

protein sequence of TCONS_00018916-protein

>TCONS_00018916-protein ID=TCONS_00018916-protein|Name=TCONS_00018916-protein|organism=Clytia hemisphaerica|type=polypeptide|length=797bp
IWLYFYLSEHKKDTKTKRKMEASLLQQKLSGLRPELINQNKCTNKTSLHQ
NILRHSQSVLQSQHKKYNLGNGYHCADPLTAAEYLLQREYGETSLYDPKQ
RAPVIIPQVFNSNQYAKSSPVNILDYEIGMATMQNTLENLTNERPDYWFT
KEMQAFYDENAQQASKDIDKKKFDRWILHCKIMHLTIQEIGGGAATLDLP
LLTTSETEPFARACLAELASNSPPSSSKLKNMLQSSVANLRRKIENLIKS
NPPTDPIALWYFELNLAELGENAEDWFRNQFLALQSDEILHDTVILQSAK
FMTNIKKKFHQEFDFLLLSWTRKLIIAVEIKRQSSATMDAIGQLETYKQI
FDEKLGDQLDNWWTFLPVICVEKNHHNLNQTQHYITFQTNIKSWLLGIFT
QYPELPCTVSSLNQVKNVLRMIIFTIHVSKSAPVTTSNWVEYTSNAIESI
STVENIVFYSSTQMHIMNPNEPRLRKLLIRGGYGTGKSFLLEEKAKQLSR
DPHYAGNIVYVCWRVEPTSLLEWRLXMYVCWHVEPTSLLEWRLKLDLEEK
HGVGIIGLNYNAEKETQDLLVQTVRQKKVKALFFDEWKEQQYHDFFSWML
NETVFQSLEIIWIAFQGGKSAHTEKASQQFTLLDLSTNFRNSRELVKEAK
NVADKKHYKYKSGLVLPPPMFPSGRPPIYVNSFENAIKEMRKLSQSGILV
IADMRTDGEHWGEQTVVLDKMNEEWKRYDFTDKDFRAKENPYEVLKNGNI
LLTDCLFIQGFEWVNVVSFREDANYIDYHDCNYFMRCNTNLVVIDKI
Run BLAST on NCBI

transcript from alignment at sc0000313:135057..139716+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018916 ID=TCONS_00018916|Name=TCONS_00018916|organism=Clytia hemisphaerica|type=transcript|length=4660bp|location=Sequence derived from alignment at sc0000313:135057..139716+ (Clytia hemisphaerica)
ATCTGGTTATACTTTTATCTTTCAGAGCATAAAAAAGACACTAAAACAAA GAGGAAAATGGAAGCAAGTCTTCTGCAACAAAAACTATCTGGTTTGAGAC CAGAGCTCATCAACCAAAACAAATGTACCAACAAAACATCATTGCACCAA AACATCTTGCGACACTCCCAAAGTGTACTACAGTCACAGCACAAGAAGTA CAACCTTGGGAATGGTTACCATTGTGCAGACCCCCTGACGGCTGCTGAGT ATCTACTCCAACGGGAATACGGTGAAACTTCCTTGTACGATCCAAAACAG CGGGCACCTGTCATAATCCCACAAGTATTCAATTCAAATCAATATGCTAA AAGCTCTCCGGTCAACATCCTTGATTACGAGATAGGAATGGCAACAATGC AAAATACTTTGGAGAATCTGACCAATGAACGACCCGATTATTGGTTTACA AAGGAAATGCAAGCATTTTATGACGAAAACGCGCAACAGGCGAGCAAGGA TATcgataaaaagaaatttgatagATGGATTCTTCACTGTAAGATAATGC ATCTTACCATTCAAGAGATTGGTGGTGGTGCAGCAACGTTGGACTTGCCG TTACTAACAACTTCAGAAACTGAACCTTTTGCCAGAGCTTGTCTTGCAGA GCTTGCTTCAAACTCACCACCATCATCATCCAAGTTAAAAAACATGCTCC AAAGTAGTGTGGCAAACTTGcgtcgaaaaattgaaaatctgaTTAAGAGT AATCCACCAACTGACCCTATAGCCTTATGGTATTTTGAATTGAACCTGGC AGAATTAGGTGAAAATGCTGAAGATTGGTTTCGGAATCAATTTTTAGCAT TACAATCCGATGAAATTCTTCACGATACTGTCATCCTACAATCTGCTAAA TTCATGACTaacattaaaaagaaatttcatcAAGAGTTTGATTTCCTTCT CCTCTCATGGACAAGAAAACTGATCATCGCTGTTGAAATCAAACGCCAAT CGTCAGCAACAATGGATGCAATCGGACAGCTGGAGACTTACAAACAAATA TTCGACGAGAAACTTGGTGATCAACTTGACAACTGGTGGACTTTCCTACC AGTTATCTGTGTCGAGAAAAATCATCATAATCTCAATCAAACACAACACT ACATTACCTTTCAAACTAACATCAAATCATGGCTTTTGGGGATTTTCACA CAATATCCTGAATTACCATGCACCGTTTCATCGTTAAATCAAGTCAAAAA TGTGTTAAGAATGATCATCTTCACAATCCACGTGTCAAAAAGTGCTCCAG TAACCACCTCAAATTGGGTCGAGTATACGTCAAACGCCATCGAATCTATT TCAACCgttgaaaatattgttttttattcCAGCACTcaaatgcatataat gaatccCAACGAGCCACGCCTTCGAAAACTTCTCATCAGGGGTGGTTATG GAACAGGAAAAAGCTTCTTACTGGAGGAGAAAGCAAAACAACTGAGCAGA GATCCACATTACGCTGGCAACATTGTGTATGTTTGCTGGCGCGTTGAGCC AACTAGTTTACTTGAATGGCGTTTGAANATGTATGTTTGCTGGCACGTTG AGCCAACTAGTTTACTTGAGTGGCGTTTGAAGCTAGACTTAGAAGAAAAG CATGGAGTGGGCATTATAGGATTGAATTACAATGCTGAGAAGGTAATaaa tacttttttgtttttccttgtttttcttttctttacaagGTTTCATTTCG AAAATTGGAGGTTAAATTGTATGGCGTCATATACTGGACAAAATCGAATG GGCGAATTGGAAATGCAGAACACCAGCTTGAAATGCAGTTTTCGTTTTGG AATGGCGCATTTCAAGCCGAATTCTGATATATCAAACTAAGTTATTCCAT TTCAACCTGAGACATACCAACTTGATGCATTTCATTCCAACTTGACGCAT TCCGACTTGATGCATTCTAACTTGGTGTATTCCAACTTAACACAATAGAA AAACCAGACCAGATTTTCGTCTGGATAATTTTTTCGTACGGGTATTTTTG CTTTCTGTATTACGTATTACAAATTTATCCAACTTTTGCCACTTGCATCT CAAGGCCTTGCTTTGGGAGATATGTAAATGCTGAAACTTATGAGTATCTT TCCAATGCAGCAAAGCGCTGGAGAAAGTTTTTATACATCCTTTTCAGTAC AACCCGTCAGTTTCCATTTCCAGAACAGGAAATATCGGAAGATCGTCTTT TGATATTTCCTATGgagtttttttaaactttaatttaaaattttaaaaac gtaCAAAACGCAGACCAGATAAAAACGGAGGGAATCTATTTTGCGGACCG ATAAGTAAACAGTTTCAAATAGGAATGCGTCAAGTTGGAATACATCGATT TGAAATGTTTCAAATTGAAATGCATCGATCTGGAATACATCAAGTCGGAA TGCATCAAGTCGGAATACGTCAAATTGGAATGTCTCAGGCTTGAATGCAT CAAGTTGAAATGCATCAATTTGGTTGATTTGGAATACATCAAGGTGGAAT GCGTTAAGTCGGAATGCACCAATTTGAAATACGTCAAGTTGATATATCAG AATTCGGCTTGAAATGCGCCATTCCAAAACAAAAACTGCATTTCAAGCTG GTGTTCTGCATTTCCAATTCGCCCATTCGATTTTGTTCAGCTTTTTACAT AAAATTGTCCTCAAATCTTATCTGTATTATTCCGAAAAGTACGTTTCAAA ATATATCCtaactccataactcgaaatttccttaactcgaacaaatttgt gtacCCTGTGCGGTTTCGAGTTCCACTGTACCATTTTTAGGTCAAGTTGT GGCTCATCCAGTATTACCTTTAGTTAatgatttgtttatttattaCTTCT AAAGGAAACACAAGATTTATTGGTGCAAACAGTTCGTCAAAAAAAGGTGA AAGCATTATTTTTTGACGAGTGGAAAGAACAACAATATCACGACTTCTTC TCTTGGATGCTAAACGAAACAGTTTTCCAAAGTCTTGAAATCATATGGAT CGCTTTTCAAGGTGGAAAGAGTGCTCACACCGAAAAAGCATCCCAACAAT TTACGTTGCTTGATCTTTCTACTAATTTCAGGAACAGTAGAGAGTTGGTC AAGGAGGCTAAAAATGTTGCTGACAAGAAACACTACAAATACAAAAGTGG GTTGGTTTTGCCTCCCCCCATGTTCCCAAGTGGGCGTCCGCCCATTTACG TGAATTCCTTTGAAAATGCAATCAAGGAAATGCGAAAGTTGTCACAATCA GGGATCTTGGTGATCGCTGATATGAGAACCGATGGCGAGCATTGGGGAGA GCAAACTGTAGTCCTAGATAAAATGAACGAAGAATGGAAAAGATACGATT TCACTGATAAAGATTTCAGGGCGAAGGAAAACCCTTATGAAGTTCTCAAA AACGGTAACATCTTGCTGACCGACTGTTTGTTTATCCAAGGATTTGAATG GGTGAATGTGGTTTCATTCCGCGAAGACGCGAACTACATTGATTATCATG ATTGTAATTATTTCATGCGCTGCAACACAAACCTTGTTGttattgataaa atttaaaacCGTTTACAGCTCATTTACAATACAGTTGACTTTCGCTAATT CGAATTCGAACGGGGAATTAGatttgttcgagttacagagagattcgaat tgtaGAAAGTATTTCAAGATGGATACTCCTGGAAATAAGTTCTAAGAATA GAAGTTCGAAAAACGAGAGTTTAATGTATTAATTTATCGTTATCTATGta atatttttgtctattttctaaACAATTCCTCAATTTAAATTTCAAGTAGC TAAACTTGATAGCCTTTCAGGGAAATCTCTACCAGGAAAATATGACGAAA TTTTAGCTAACTGGTGAAAAACATCCCGGTCAGTTTTAACGAAAATTTTT AGAAGTGACGAATACTTGGCACCGCGAACAGCGAATAGAATGTTTCAAAT TctattaaaaacaaatatttataATATTACGTTGTAACACTTTCTGCTTT GCCAGAAGTTCAGAAAATGTTAAAGCGGTTCACAAATTTGTAAAGCTCGA AACCTttcttttcaaagcaaaatAATCATTTTAAAACCAAATCGTTAAGT TTAGTTCTTCCTGTTTAGGGATTCATTCTGACCCATTAAGGGGGTGAAAT AACAATTGGTATAAAGTGGAAAGTTAGATAATACATACCGGATCATACCC AGACTCATTTCGTCGACAGTTGCAGCTTCACTTTTACCACGTGGCGTTGG TTCTGTATCGAAAATGACATGCGCACAGGGCATGTGCCAAAACTGAAACG AGAAGAACAAAACattgtatttattttatttgcaCGTAAAAAACATGtct tttaacttttaattttgatgacttacacttataattttttatataatgCA GTATATTTTAAGATTGATAAAAACTTGTATTCGTCCTGACTTTTAACATT CTTGTTCCATTCTTTGAATCTAGAAGACACTCGAGATGCATCAATTTGGa gtaattttctttttacttttttcttcttggGATAATTTGGTGATTTAACT GAATTCAATTTTCTTCTAACGTAAACGTAAAATATTGCCGCCCAAGTACT TCTTCACATG

Coding sequence (CDS) from alignment at sc0000313:135057..139716+

>TCONS_00018916 ID=TCONS_00018916|Name=TCONS_00018916|organism=Clytia hemisphaerica|type=CDS|length=4788bp|location=Sequence derived from alignment at sc0000313:135057..139716+ (Clytia hemisphaerica)
ATCTGGTTATACTTTTATCTTTCAGAGCATAAAAAAGACACTAAAACAAA
GAGGAAAATGGAAGCAAGTCTTCTGCAACAAAAACTATCTGGTTTGAGAC
CAGAGCTCATCAACCAAAACAAATGTACCAACAAAACATCATTGCACCAA
AACATCTTGCGACACTCCCAAAGTGTACTACAGTCACAGCACAAGAAGTA
CAACCTTGGGAATGGTTACCATTGTGCAGACCCCCTGACGGCTGCTGAGT
ATCTACTCCAACGGGAATACGGTGAAACTTCCTTGTACGATCCAAAACAG
CGGGCACCTGTCATAATCCCACAAGTATTCAATTCAAATCAATATGCTAA
AAGCTCTCCGGTCAACATCCTTGATTACGAGATAGGAATGGCAACAATGC
AAAATACTTTGGAGAATCTGACCAATGAACGACCCGATTATTGGTTTACA
AAGGAAATGCAAGCATTTTATGACGAAAACGCGCAACAGGCGAGCAAGGA
TATcgataaaaagaaatttgatagATGGATTCTTCACTGTAAGATAATGC
ATCTTACCATTCAAGAGATTGGTGGTGGTGCAGCAACGTTGGACTTGCCG
TTACTAACAACTTCAGAAACTGAACCTTTTGCCAGAGCTTGTCTTGCAGA
GCTTGCTTCAAACTCACCACCATCATCATCCAAGTTAAAAAACATGCTCC
AAAGTAGTGTGGCAAACTTGcgtcgaaaaattgaaaatctgaTTAAGAGT
AATCCACCAACTGACCCTATAGCCTTATGGTATTTTGAATTGAACCTGGC
AGAATTAGGTGAAAATGCTGAAGATTGGTTTCGGAATCAATTTTTAGCAT
TACAATCCGATGAAATTCTTCACGATACTGTCATCCTACAATCTGCTAAA
TTCATGACTaacattaaaaagaaatttcatcAAGAGTTTGATTTCCTTCT
CCTCTCATGGACAAGAAAACTGATCATCGCTGTTGAAATCAAACGCCAAT
CGTCAGCAACAATGGATGCAATCGGACAGCTGGAGACTTACAAACAAATA
TTCGACGAGAAACTTGGTGATCAACTTGACAACTGGTGGACTTTCCTACC
AGTTATCTGTGTCGAGAAAAATCATCATAATCTCAATCAAACACAACACT
ACATTACCTTTCAAACTAACATCAAATCATGGCTTTTGGGGATTTTCACA
CAATATCCTGAATTACCATGCACCGTTTCATCGTTAAATCAAGTCAAAAA
TGTGTTAAGAATGATCATCTTCACAATCCACGTGTCAAAAAGTGCTCCAG
TAACCACCTCAAATTGGGTCGAGTATACGTCAAACGCCATCGAATCTATT
TCAACCgttgaaaatattgttttttattcCAGCACTcaaatgcatataat
gaatccCAACGAGCCACGCCTTCGAAAACTTCTCATCAGGGGTGGTTATG
GAACAGGAAAAAGCTTCTTACTGGAGGAGAAAGCAAAACAACTGAGCAGA
GATCCACATTACGCTGGCAACATTGTGTATGTTTGCTGGCGCGTTGAGCC
AACTAGTTTACTTGAATGGCGTTTGAANATGTATGTTTGCTGGCACGTTG
AGCCAACTAGTTTACTTGAGTGGCGTTTGAAGCTAGACTTAGAAGAAAAG
CATGGAGTGGGCATTATAGGATTGAATTACAATGCTGAGAAGGAAACACA
AGATTTATTGGTGCAAACAGTTCGTCAAAAAAAGGTGAAAGCATTATTTT
TTGACGAGTGGAAAGAACAACAATATCACGACTTCTTCTCTTGGATGCTA
AACGAAACAGTTTTCCAAAGTCTTGAAATCATATGGATCGCTTTTCAAGG
TGGAAAGAGTGCTCACACCGAAAAAGCATCCCAACAATTTACGTTGCTTG
ATCTTTCTACTAATTTCAGGAACAGTAGAGAGTTGGTCAAGGAGGCTAAA
AATGTTGCTGACAAGAAACACTACAAATACAAAAGTGGGTTGGTTTTGCC
TCCCCCCATGTTCCCAAGTGGGCGTCCGCCCATTTACGTGAATTCCTTTG
AAAATGCAATCAAGGAAATGCGAAAGTTGTCACAATCAGGGATCTTGGTG
ATCGCTGATATGAGAACCGATGGCGAGCATTGGGGAGAGCAAACTGTAGT
CCTAGATAAAATGAACGAAGAATGGAAAAGATACGATTTCACTGATAAAG
ATTTCAGGGCGAAGGAAAACCCTTATGAAGTTCTCAAAAACGGTAACATC
TTGCTGACCGACTGTTTGTTTATCCAAGGATTTGAATGGGTGAATGTGGT
TTCATTCCGCGAAGACGCGAACTACATTGATTATCATGATTGTAATTATT
TCATGCGCTGCAACACAAACCTTGTTGttattgataaaatttaaATCTGG
TTATACTTTTATCTTTCAGAGCATAAAAAAGACACTAAAACAAAGAGGAA
AATGGAAGCAAGTCTTCTGCAACAAAAACTATCTGGTTTGAGACCAGAGC
TCATCAACCAAAACAAATGTACCAACAAAACATCATTGCACCAAAACATC
TTGCGACACTCCCAAAGTGTACTACAGTCACAGCACAAGAAGTACAACCT
TGGGAATGGTTACCATTGTGCAGACCCCCTGACGGCTGCTGAGTATCTAC
TCCAACGGGAATACGGTGAAACTTCCTTGTACGATCCAAAACAGCGGGCA
CCTGTCATAATCCCACAAGTATTCAATTCAAATCAATATGCTAAAAGCTC
TCCGGTCAACATCCTTGATTACGAGATAGGAATGGCAACAATGCAAAATA
CTTTGGAGAATCTGACCAATGAACGACCCGATTATTGGTTTACAAAGGAA
ATGCAAGCATTTTATGACGAAAACGCGCAACAGGCGAGCAAGGATATcga
taaaaagaaatttgatagATGGATTCTTCACTGTAAGATAATGCATCTTA
CCATTCAAGAGATTGGTGGTGGTGCAGCAACGTTGGACTTGCCGTTACTA
ACAACTTCAGAAACTGAACCTTTTGCCAGAGCTTGTCTTGCAGAGCTTGC
TTCAAACTCACCACCATCATCATCCAAGTTAAAAAACATGCTCCAAAGTA
GTGTGGCAAACTTGcgtcgaaaaattgaaaatctgaTTAAGAGTAATCCA
CCAACTGACCCTATAGCCTTATGGTATTTTGAATTGAACCTGGCAGAATT
AGGTGAAAATGCTGAAGATTGGTTTCGGAATCAATTTTTAGCATTACAAT
CCGATGAAATTCTTCACGATACTGTCATCCTACAATCTGCTAAATTCATG
ACTaacattaaaaagaaatttcatcAAGAGTTTGATTTCCTTCTCCTCTC
ATGGACAAGAAAACTGATCATCGCTGTTGAAATCAAACGCCAATCGTCAG
CAACAATGGATGCAATCGGACAGCTGGAGACTTACAAACAAATATTCGAC
GAGAAACTTGGTGATCAACTTGACAACTGGTGGACTTTCCTACCAGTTAT
CTGTGTCGAGAAAAATCATCATAATCTCAATCAAACACAACACTACATTA
CCTTTCAAACTAACATCAAATCATGGCTTTTGGGGATTTTCACACAATAT
CCTGAATTACCATGCACCGTTTCATCGTTAAATCAAGTCAAAAATGTGTT
AAGAATGATCATCTTCACAATCCACGTGTCAAAAAGTGCTCCAGTAACCA
CCTCAAATTGGGTCGAGTATACGTCAAACGCCATCGAATCTATTTCAACC
gttgaaaatattgttttttattcCAGCACTcaaatgcatataatgaatcc
CAACGAGCCACGCCTTCGAAAACTTCTCATCAGGGGTGGTTATGGAACAG
GAAAAAGCTTCTTACTGGAGGAGAAAGCAAAACAACTGAGCAGAGATCCA
CATTACGCTGGCAACATTGTGTATGTTTGCTGGCGCGTTGAGCCAACTAG
TTTACTTGAATGGCGTTTGAANATGTATGTTTGCTGGCACGTTGAGCCAA
CTAGTTTACTTGAGTGGCGTTTGAAGCTAGACTTAGAAGAAAAGCATGGA
GTGGGCATTATAGGATTGAATTACAATGCTGAGAAGGAAACACAAGATTT
ATTGGTGCAAACAGTTCGTCAAAAAAAGGTGAAAGCATTATTTTTTGACG
AGTGGAAAGAACAACAATATCACGACTTCTTCTCTTGGATGCTAAACGAA
ACAGTTTTCCAAAGTCTTGAAATCATATGGATCGCTTTTCAAGGTGGAAA
GAGTGCTCACACCGAAAAAGCATCCCAACAATTTACGTTGCTTGATCTTT
CTACTAATTTCAGGAACAGTAGAGAGTTGGTCAAGGAGGCTAAAAATGTT
GCTGACAAGAAACACTACAAATACAAAAGTGGGTTGGTTTTGCCTCCCCC
CATGTTCCCAAGTGGGCGTCCGCCCATTTACGTGAATTCCTTTGAAAATG
CAATCAAGGAAATGCGAAAGTTGTCACAATCAGGGATCTTGGTGATCGCT
GATATGAGAACCGATGGCGAGCATTGGGGAGAGCAAACTGTAGTCCTAGA
TAAAATGAACGAAGAATGGAAAAGATACGATTTCACTGATAAAGATTTCA
GGGCGAAGGAAAACCCTTATGAAGTTCTCAAAAACGGTAACATCTTGCTG
ACCGACTGTTTGTTTATCCAAGGATTTGAATGGGTGAATGTGGTTTCATT
CCGCGAAGACGCGAACTACATTGATTATCATGATTGTAATTATTTCATGC
GCTGCAACACAAACCTTGTTGttattgataaaatttaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010603XLOC_010603Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018916-proteinTCONS_00018916-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018916-exon-sc0000313-1491911889:135057..136748TCONS_00018916-exon-sc0000313-1491911889:135057..136748Clytia hemisphaericaexon
TCONS_00018916-exon-sc0000313-1510915933:135057..136748TCONS_00018916-exon-sc0000313-1510915933:135057..136748Clytia hemisphaericaexon
TCONS_00018916-exon-sc0000313-1575043694:135057..136748TCONS_00018916-exon-sc0000313-1575043694:135057..136748Clytia hemisphaericaexon
TCONS_00018916-exon-sc0000313-1491911889:137961..139716TCONS_00018916-exon-sc0000313-1491911889:137961..139716Clytia hemisphaericaexon
TCONS_00018916-exon-sc0000313-1510915933:137961..139716TCONS_00018916-exon-sc0000313-1510915933:137961..139716Clytia hemisphaericaexon
TCONS_00018916-exon-sc0000313-1575043694:137961..139716TCONS_00018916-exon-sc0000313-1575043694:137961..139716Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000313supercontigsc0000313:135057..139716 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0784305 0 0.228459 0.372787 1.62323 0.998974 4.2718 3.97764 2.26773 2.85143 2.71404 2.76701 5.05123 4.69387 5.28568 4.53353 1.95798 1.74689 4.64054 4.38222 3.00648 2.30443 2.83104 2.63693 3.6985 4.52999 1.69538 1.86663 4.90661 3.30584
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00018916 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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