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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018901 ID=TCONS_00018901|Name=TCONS_00018901|organism=Clytia hemisphaerica|type=transcript|length=1340bp
AGCTCATCTTCAAATTTCTTCGATTTTCTCAAACTTGGCTATGTGCTTCC
GCAGTTCACACTTGCTGACTCGCAATGTCATCTTGAATTTTCTTGTGAAA
TATGTCCTTTGTATGGTGACTTTATATGAAATCTCAAGGTAGTGGATGCA
ATATCGGTCTCGGCAGATTTCAAGGTTTTCGTCAGCTTTATGATCACTCA
ATTACATCGCACCATAAAGAAGcgattcaattttttgaaaggtcAGTCTG
TCAGGACTTTTCAGCAAGTTTAAAAAAGAAACCAGATCAATACATCAGTA
ATTACTTCAAGTCGACTGGAAAAGGAAGAACAGTAGCATGTCATTTTTTC
TGGGATCATCATTTTGTTCAAGAATTGAAGGATAAAAGAAACATCCGAAG
TATGCAGCCCAAAACTCTCTtcaagaaaaaagaattgtGGAAAAAATGCG
CTCCTGAACATGGCCATGCTGTTTGTTCCAAGTTTGATAAATAGCGGGAA
AAGCATCCTCAAGACTACAATGAACTCAATTATGAGTCAAAGCAATCATA
CAGGTCTGTGTTTGTACCTGGTAAGTCGGTCATCATATTAAATGGTAAAA
CTCTTGAAATTGACGGAGGCATTAAATCTTTGGATCCTCCATGTTTGGGT
ACTGCTTTCAATGTTGGTCCACATCCATTTACATGTATCAATTGCTATGC
acaatgagtttctttcaaagatCTCATTTCCAAGCGACAAAATGCTTCCT
TGCCAACACGTGAGTCAAGAATCGGCCAAAGAGGTTTTCGAACTTCTTAT
gcaactaaagaaaaaatggaCGAGTATAACATAAGCATCGAGAAAGAAAA
CAAGGAACTGAAGTTGCAAAACAAAAGACTTTCCAGAACCCTTTATAGCA
AAAAGGCGTGGCAAAAAATTCTAATGCAGTCCTATCTGGATGACGACATT
AAGAAAATGACTATCGATCTCATCTCACTCTTTGAACAACGCGATAAGCG
GGAATCCATACAGTTTGCTTTACTGAAGAATCTGCTCCTAAAAATGAAAT
CTGGGGTGAATCACAAGTTTACTTTGCTGATAAAAAACGTTGCGTGCCTC
TATAAAAACCACCTTAGAACCACCAATTATAGTCTTTTACAAAGCCTTTT
TGGATTGCCAGGAAAAACATGTGCTTCTGAACATGCGAAACCTGCGGAGA
TCAACCTTGGATTCAACAACAACGCCATTGAAACTGCTACTGAGCGGTAT
GCTAATCGTCCTGTTGTGGAATGTTCCGACGAGGCAAGAACATTGCGTTA
TATTTCTCCACTCATGGACCAAAATGGCAAAATTGAATTG Run BLAST on NCBI protein sequence of TCONS_00018901-protein >TCONS_00018901-protein ID=TCONS_00018901-protein|Name=TCONS_00018901-protein|organism=Clytia hemisphaerica|type=polypeptide|length=175bp
MDEYNISIEKENKELKLQNKRLSRTLYSKKAWQKILMQSYLDDDIKKMTI
DLISLFEQRDKRESIQFALLKNLLLKMKSGVNHKFTLLIKNVACLYKNHL
RTTNYSLLQSLFGLPGKTCASEHAKPAEINLGFNNNAIETATERYANRPV
VECSDEARTLRYISPLMDQNGKIEL Run BLAST on NCBI transcript from alignment at sc0000310:330661..332000 Legend: exonCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018901 ID=TCONS_00018901|Name=TCONS_00018901|organism=Clytia hemisphaerica|type=transcript|length=1340bp|location=Sequence derived from alignment at sc0000310:330661..332000 (Clytia hemisphaerica)
CAATTCAATTTTGCCATTTTGGTCCATGAGTGGAGAAATATAACGCAATG
TTCTTGCCTCGTCGGAACATTCCACAACAGGACGATTAGCATACCGCTCA
GTAGCAGTTTCAATGGCGTTGTTGTTGAATCCAAGGTTGATCTCCGCAGG
TTTCGCATGTTCAGAAGCACATGTTTTTCCTGGCAATCCAAAAAGGCTTT
GTAAAAGACTATAATTGGTGGTTCTAAGGTGGTTTTTATAGAGGCACGCA
ACGTTTTTTATCAGCAAAGTAAACTTGTGATTCACCCCAGATTTCATTTT
TAGGAGCAGATTCTTCAGTAAAGCAAACTGTATGGATTCCCGCTTATCGC
GTTGTTCAAAGAGTGAGATGAGATCGATAGTCATTTTCTTAATGTCGTCA
TCCAGATAGGACTGCATTAGAATTTTTTGCCACGCCTTTTTGCTATAAAG
GGTTCTGGAAAGTCTTTTGTTTTGCAACTTCAGTTCCTTGTTTTCTTTCT
CGATGCTTATGTTATACTCGtccattttttctttagttgcATAAGAAGTT
CGAAAACCTCTTTGGCCGATTCTTGACTCACGTGTTGGCAAGGAAGCATT
TTGTCGCTTGGAAATGAGatctttgaaagaaactcattgtGCATAGCAAT
TGATACATGTAAATGGATGTGGACCAACATTGAAAGCAGTACCCAAACAT
GGAGGATCCAAAGATTTAATGCCTCCGTCAATTTCAAGAGTTTTACCATT
TAATATGATGACCGACTTACCAGGTACAAACACAGACCTGTATGATTGCT
TTGACTCATAATTGAGTTCATTGTAGTCTTGAGGATGCTTTTCCCGCTAT
TTATCAAACTTGGAACAAACAGCATGGCCATGTTCAGGAGCGCATTTTTT
CCacaattcttttttcttgaAGAGAGTTTTGGGCTGCATACTTCGGATGT
TTCTTTTATCCTTCAATTCTTGAACAAAATGATGATCCCAGAAAAAATGA
CATGCTACTGTTCTTCCTTTTCCAGTCGACTTGAAGTAATTACTGATGTA
TTGATCTGGTTTCTTTTTTAAACTTGCTGAAAAGTCCTGACAGACTgacc
tttcaaaaaattgaatcgCTTCTTTATGGTGCGATGTAATTGAGTGATCA
TAAAGCTGACGAAAACCTTGAAATCTGCCGAGACCGATATTGCATCCACT
ACCTTGAGATTTCATATAAAGTCACCATACAAAGGACATATTTCACAAGA
AAATTCAAGATGACATTGCGAGTCAGCAAGTGTGAACTGCGGAAGCACAT
AGCCAAGTTTGAGAAAATCGAAGAAATTTGAAGATGAGCT Coding sequence (CDS) from alignment at sc0000310:330661..332000 >TCONS_00018901 ID=TCONS_00018901|Name=TCONS_00018901|organism=Clytia hemisphaerica|type=CDS|length=525bp|location=Sequence derived from alignment at sc0000310:330661..332000 (Clytia hemisphaerica)
CAATTCAATTTTGCCATTTTGGTCCATGAGTGGAGAAATATAACGCAATG
TTCTTGCCTCGTCGGAACATTCCACAACAGGACGATTAGCATACCGCTCA
GTAGCAGTTTCAATGGCGTTGTTGTTGAATCCAAGGTTGATCTCCGCAGG
TTTCGCATGTTCAGAAGCACATGTTTTTCCTGGCAATCCAAAAAGGCTTT
GTAAAAGACTATAATTGGTGGTTCTAAGGTGGTTTTTATAGAGGCACGCA
ACGTTTTTTATCAGCAAAGTAAACTTGTGATTCACCCCAGATTTCATTTT
TAGGAGCAGATTCTTCAGTAAAGCAAACTGTATGGATTCCCGCTTATCGC
GTTGTTCAAAGAGTGAGATGAGATCGATAGTCATTTTCTTAATGTCGTCA
TCCAGATAGGACTGCATTAGAATTTTTTGCCACGCCTTTTTGCTATAAAG
GGTTCTGGAAAGTCTTTTGTTTTGCAACTTCAGTTCCTTGTTTTCTTTCT
CGATGCTTATGTTATACTCGtccat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018901-exon-sc0000310-1491911889:330661..332000 | TCONS_00018901-exon-sc0000310-1491911889:330661..332000 | Clytia hemisphaerica | exon |
| TCONS_00018901-exon-sc0000310-1510915933:330661..332000 | TCONS_00018901-exon-sc0000310-1510915933:330661..332000 | Clytia hemisphaerica | exon |
| TCONS_00018901-exon-sc0000310-1575043694:330661..332000 | TCONS_00018901-exon-sc0000310-1575043694:330661..332000 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000310 | supercontig | sc0000310:330661..332000 . |
Blast
The following BLAST results are available for this feature:
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