TCONS_00018867 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018867
Unique NameTCONS_00018867
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length284

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018867 ID=TCONS_00018867|Name=TCONS_00018867|organism=Clytia hemisphaerica|type=transcript|length=284bp
tatttatttgtttgtaataaaatttacaaaacacTAAAAACTACAACtac
attttaaaacaaatatATAAAATACATCTAATTACCCTTAAAAAAGGatc
tattaaaataaaaaaaatctataaaatctACATTTGATTGCACCTTAGAC
TGGACAACCCAGTTAATGACATCTGACTTTAAGCATTAAAATttcattct
taactttttgaaatgtCTCTAGCTTGCACGTTTGCATTCTACAGTGATGG
TCTTAGTATTACGGCATCGTTGTTTTTCTCCNCT
Run BLAST on NCBI

transcript from alignment at sc0000309:77789..78072

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018867 ID=TCONS_00018867|Name=TCONS_00018867|organism=Clytia hemisphaerica|type=transcript|length=284bp|location=Sequence derived from alignment at sc0000309:77789..78072 (Clytia hemisphaerica)
AGNGGAGAAAAACAACGATGCCGTAATACTAAGACCATCACTGTAGAATG
CAAACGTGCAAGCTAGAGacatttcaaaaagttaagaatgaaATTTTAAT
GCTTAAAGTCAGATGTCATTAACTGGGTTGTCCAGTCTAAGGTGCAATCA
AATGTagattttatagattttttttattttaatagatCCTTTTTTAAGGG
TAATTAGATGTATTTTATatatttgttttaaaatgtaGTTGTAGTTTTTA
gtgttttgtaaattttattacaaacaaataaata
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010566XLOC_010566Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018867-exon-sc0000309-1491911889:77789..78072TCONS_00018867-exon-sc0000309-1491911889:77789..78072Clytia hemisphaericaexon
TCONS_00018867-exon-sc0000309-1510915933:77789..78072TCONS_00018867-exon-sc0000309-1510915933:77789..78072Clytia hemisphaericaexon
TCONS_00018867-exon-sc0000309-1575043694:77789..78072TCONS_00018867-exon-sc0000309-1575043694:77789..78072Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000309supercontigsc0000309:77789..78072 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0.50041	3.01861	1.1304	2.93083	2.52577	1.55582	1.5637	5.11386	1.66819	2.84978	6.83993	2.11508	2.5908	0	0	6.60693	6.51821	1.7416	8.01677	1.51251	1.34988	2.63225	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00018867 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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