TCONS_00018852 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018852
Unique NameTCONS_00018852
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1173

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018852 ID=TCONS_00018852|Name=TCONS_00018852|organism=Clytia hemisphaerica|type=transcript|length=1173bp
AGCACTGACTGCTTTCTTCCTGTAAGAAAGGAATTGAGCCATTGTAGTAT
TTTTCCATCAATTCCTAGTTGCTTTATCTTGTGTAGGACAATTTCATGGT
CAACTTTATTGAAGGCTTTCGAGACTTTCGACGCATCAACATCTACCGTG
AATTTGGGTAACTTGCATGAGGGAAAAAAGGGTTCATGGTCGTTATCAtc
attattattgttgttatttcaggtttgatttttatattttaaaggAAGGA
CACTTGGAGATCCATAACATATAATAAAAACCATTAAAGAAAagccattt
taccaaaaaaaatatGCAGCAGGAAAAAGAAGAGAATGTCATTGCAACGT
CACtgcaaaatttgattggtcgcgTCAGTGATATCAAGATGTCcatccaa
aatttcatgtttaaatTGGAACATGAAACTCTCTCTTGGCCTCAGATGTT
GGACAATTTCGCCTTGTTATCGGGTCAAATCAGCACATTGAACAAACTTC
TGAAGAACGATCGAATGCCAGTGTTGAGGAATCTTTGCATTTTGCCACTG
ATGGTCAGTCAAGAACGTGACACTGAGATGGAGgAAATGACAGAAAATCG
CATACCAGTTGTGACTCATGAAGTGGTACCGGATGCATTGCGAACGAAAT
ACGAACCGGACGTCGAGAAAGTAGAGGAAGAACTCACTTTACAATCCAAC
TCCATCTCTGTTGATATGGCTAGGTCTCAAGTAGTAGCGTTGAACGATCT
GATTGGCTCCATGTTGGATTTGATACAAAACAGTCGCGATTGGGAAACGG
AAAGTTCGGTGGAGCAAGCAGACTTAGCGCCGTCAGCAAACGATACCAAC
ATCCTCTTGGCTGCCATCACGCAAGGCTCTGGATTACGAAAGTCGTCGAG
TTCACGAAGTTCCTCACAGCGAAGTTCATCGCAACAGCGAAGCAGTTCGC
ACCACCATTAGAATTTTAATGTAAAAtagctttttcatttttattgtagt
ataatattttttaaattgtcaatatatacaaaatttaacgaataaaatca
aattgtaaaatttatttcatcTGAATTATCAGCCTTTCCAAGAAACCGAA
AACTTTTCGGGTTGATGGAGAAAAACTTGTTAGGGTCGTAAAATGATTCT
TCGTACGTGTTTAGCTTCCATGT
Run BLAST on NCBI

transcript from alignment at sc0000309:212863..222648-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018852 ID=TCONS_00018852|Name=TCONS_00018852|organism=Clytia hemisphaerica|type=transcript|length=9786bp|location=Sequence derived from alignment at sc0000309:212863..222648- (Clytia hemisphaerica)
AGCACTGACTGCTTTCTTCCTGTAAGAAAGGAATTGAGCCATTGTAGTAT
TTTTCCATCAATTCCTAGTTGCTTTATCTTGTGTAGGACAATTTCATGGT
CAACTTTATTGAAGGCTTTCGAGACTTTCGACGCATCAACATCTACCGTG
AATTTGGGTAACTTGCATGAGGGAAAAAAGGGTTCATGGTCGTTATCATC
ATTATTATTGTTGTTATTTCAGGTTTGATTTTTATATTTTAAAGGAAGGA
CACTTGGAGATCCATAACATATAATAAAAACCATTAAAGAAAAGCCATTT
TACCAAAAAAAATATGCAGCAGGTGTGTACAATTTTCCAAAAAAATCTGT
TTTATAAGTAGTTACAAATTATTTTTGAAACAGTTCTAAATGATAATAAA
AGGTATATCAGTGTTGCAAATTTTTGGAATGTACAGGTATGTAGACGGAA
AATCTGGCCATTGAGATAAACAAGAATGATTTTGATCAAATAACTCCTCA
CTAAACCAAACGATTCAGAAAATCTAGTCGGTGCTTTGGATCCCTACTTT
GCAGGCGTTTTTAATTTGTAAAGCGTGTGTCATTTAGTTCATTTTCTTTA
AAAACATTTCTTAAAGAGTACAATCTATACGTCACTGTTATTTTAGGAAA
AAGAGGAGAATGTCATTGCAACGTCACTGCAAAATTTGATTGGTCGCGTC
AGTGATATCAAGATGTCCATCCAAAATTTCATGTTTAAATTGGAACATGA
AACTCTCTCTTGGTAAGGGTCTTTTTTCATTACAATAAATTTCTTCTTTT
TTGCTCATTGTGACTACCATGCTAAGCGTGCTTAACGAAATAGAATAACA
GTTGAATTGACTTTACTATTTTTTTATCATTAAAATTCTGTAGGCCTCAG
ATGTTGGACAATTTCGCCTTGTTATCGGGTATTTTACTACAATTACTTTA
TTAAAATTTATATTATACAATTTTTTGAGTGGGATCACAATTTAACAAAA
CATTAATTTTGCTTTATTGCGATCATTGCTTTCACAAAATAAGAGTTATA
TGTAATCAATACACCNTTTGATTTTTATATTTTAAAGGAAGGACACTTGG
AGATCCATAACATATAATAAAAACCATTAAAGAAAAGCCATTTTACCAAA
AAAAATATGCAGCAGGTGTGTACAATTTTCCAAAAAAATCTGTTTTATAA
GTAGTTACAAATTATTTTTGAAACAGTTCTAAATGATAATAAAAGGTATA
TCAGTGTTGCAAATTTTTGGAATGTACAGGTATGTAGACGGAAAATCTGG
CCATTGAGATAAACAAGAATGATTTTGATCAAATAACTCCTCACTAAACC
AAACGATTCAGAAAATCTAGTCGGTGCTTTGGATCCCTACTTTGCAGGCG
TTTTTAATTTGTAAAGCGTGTGTCATTTAGTTCATTTTCTTTAAAAACAT
TTCTTAAAGAGTACAATCTATACGTCACTGTTATTTTAGGAAAAAGAAGA
GAATGTCATTGCAACGTCACTGCAAAATTTGATTGGTCGCGTCAGTGATA
TCAAGATGTCCATCCAAAATTTCATGTTTAAATTGGAACATGAAACTCTC
TCTTGGTAAGGGTCTTTTTTCATTACAATAAATTTCTTCTTTTTTGCTCA
TTGTGACTACCATGCTAAGCGTGCTTAACGAAATAGAATAACAGTTGAAT
TGACTTTACTATTTTTTTATCATTAAAATTCTGTAGGCCTCAGATGTTGG
ACAATTTCGCCTTGTTATCGGGTATTTTACTACAATTACTTTATTAAAAT
TTATATTATACAATTTTTTGAGTGGGATCACAATTTAACAAAACATTAAT
TTTGCTTTATTGCGATCATTGCTTTCACAAAATAAGAGTTATATGTAATC
AATACACCTTAAAGGAAGAAATTTTGGTGGGAATTTAATTTGGTGGTTGC
AGGATTTGTTTTGGCCAAAATCGTTATCAAATAAGCAAAAAAACCTGTTT
TAAGGCCTGAAATGGCACCAATTTGGGGAATGCGTTTTAAATAAAATAAA
TTTGGCAGGAATTTAGTTTGGCGGATGGAGGAAAGAATAAACTTTGGCGG
GAACTTAAATTGGCTAAATCAGCCAAATCAGCCAAGTTTTCTTTCCGCCA
AAATTTCTTCCTTTAAGGTATATAGTTTTTTGTCAGCAACATTTTCGATC
TAATTAGAATCCATGTAGGTGTGGTGTAATCATCTTTAAATTTATTTTAC
GGCAGTCAAATTTGAAGCGATTCTTTACAGTTATTATTTTTATCGGTAGG
TCAAATCAGCACATTGAACAAACTTCTGAAGAACGATCGAATGCCAGTGT
TGAGGAATCTTTGCATTTTGCCACTGATGGTCAGTCAAGAACGTGACACT
GAGATGGAGGTAAGTTTATCTTTACTTCAAAAGTATTTTAAGACCTGCAG
AGATCCCACTCGGCATGTTTTTCATGATTTTCATGATTTTTGCAAATTTG
GCATTTTTCATGGTTTTTAGCATGTTTTGGATCATTTTGGCATGTTTTTC
AGAGAATCATTAGGGAATTTTGTTTATATTGTCTCTTCTCTGTCCTGATA
TTCAGATTCATTAAAGATAGCTCAAAATAGCACTTTCAGCCCCCAAAAAT
TCTAAAATTTTCTGACTTGCCCAACCATGGTGGGCAACGTTAAATATTAT
CTTAAGTTTTCAATAAATACCATTGACAGAAATGTTAAAACAAGGATGTG
TCAGGCAGGGGATCCATCTTTTCCAATGCTTCATAGGGAGGTGGGAGATT
TCCCGAAAAAAATGAGGGGGTTTAAGATTTTAGAGGGGGGGTCAAGTAAA
AATAGGGGGGATAACAACTTTTGGTCAAAATATCTATCATATTTATATTG
ATTTAGTTATTTGGTATGGGACAACTAAAAAACAAGTGTAGATAGCTAAA
TCTTTGCCTGCGGCACCATGTTAAACTCTTTTTTTTCATATAATTTTTTA
TACAAATTTCAATGTTTTCGGTTTTGAATGACTGGTGGACTGCTGCTGTC
AATAGCACGGGCTCGAATTTTTTTTTTAATAGGGGGATACACATATAGGG
GGATGAAATAAAAATAGGGGGTTTAGATTACTCTGCACACTATGTTTTTC
TCCGTTCAAGCTCTACTTTATAAAACAAGTAGCCAATATTTGGAAGTTTT
GTCAAGACTACATGTCACTGAACCACCTCATTATTCTTCCAGGGTTTAGA
CAGGTCCATGACCTCGGCAAAACACAGGGTTTTTTTAAAGAACCAATTTT
TAAAATGTCTCTTGCATTATAGCTTGTATTCTAGTGTCTGGATATACATG
ATTTTTAAATATTTCTCCTTTGGGGCCAACTTTGGTTTTTTCAGGAACAG
GGCTCCCTAAGCTAAAATTTGCCTTATGTACATTTTTCTGATTCTTACTT
ATATTGTTCCTACATTTCAATCAGTTATTGGACCTACCTTATTGGAGGTT
CTATAAATTAACCCATGTCCGTTCGTTCGTTCGTCTGTCCGTCCGTCTGT
TACCAGCTTTTCTCAGAATTGGCTCATTAGTTTTTTCTGACTTTTTGCAC
AATGATGCAAAATGGCAATGCCCAGAACGTGACGGAGCCCGATTTTTGAG
AACAAATTTATTTGGGCAAATTTGGGCCAAAANNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNAATAGGGTTTTTTAGACTTTGTGCAAAATCCTGTCATTA
CTTTTTTCTGATTTTTTGTACAAAGATGGAGGGCAAGATTCTCTAAAGAA
TGGCTGAGGTGATTTTTCCTGGAAAATTCTTATTCGCCTTAAAAAACGGA
TTTTTGTATTTTGGGGAAATTCCCTATAACCAAATAAGAAAATATACCTT
TTCTCAACGTTGACTCGTTATTTTTTTCTGATTTTTTTGCACAATGATGC
AAAATGGCAATGCCTAAAATGTGTCAGAGCCCGATTTTCGAAAAAAAAAT
ATATTTGGGCAAATTTGGGCCAAAAACTGCCTAAAAATAGGGTTTTTTGG
ACTTTGTGCAAAATCCTGTCATTACTATTTTCTGATTTTTTGTACAAAGA
TGGAGGGCAAGATTCTCTAAAGAATGGCTGAAGTGGTTTTTCCTGGAAAA
TTCTTATTCGCCTTAAAAAACGGATTTTCGTATTTTGGGGAAATTCCTTT
TAACCAAATAAGAAAATATAGCTTTTCTCAAAGTTGACTCATTATTTTTT
TCTGATTTTTTGCACAATGATGCAAAATGGCAATGCCCAAAATGTGACGG
AGCCAGATTTTTACGGAAAATTATTTTGAGCAAATTTGGGCCAAAAACAG
CTTAAAAGGTTTTTTGGGCCTGAATGGTTTAAATGATTTTCGTATTTGGG
GAAATTCCTTTTTACCATTTTACATTATTCAACACACAAGCTTTATTTTT
CCATTCTGAATTTTTGTACAATTATTGTCACTTTTTTCTTATTTTCATCT
GATGTTAATCATTAGGTACAGGTCCATTCAGCATGTTGCTTGTTTTCTAT
TTAGTTTTCCACCCTTGAAAAGAGACTTTTTTTGCATCTTGAAAATCAGA
AACTTTTCCTATTGTCCAACCATGGTGGGCTACATTTTGAATTGCAGCCT
TTGATTGATTAATAAATTCCAAGTGAAATGATTTCTACTTATGTTTGTGT
TATTTATTAGATTATATATCGATTTCTCATCATGTCTACATCAATGGTTT
TAGGTACGGGAAACACGGGGACTTCGTTGATTAATAACTCTACTTTTTAG
CATGTTTTTCATGTTTTCCATTTAAAATTAGCATTATTTAGCATTTTTTT
CTGCTCTTTTTGGCATTTTTTTATGCATGTTTTTTCAAAAATGCCAGTGG
GATCTCTGGACCTGTTGTATATTTTTGAAAAGCTCTCAAAAAATTAAGAT
TAGTGATATATTGCGAGTATAGGTGATTTCTTTACCTAACTCGAGATATT
AATCCTTTAAAAACAGTACATTTTTCTGTGTTTTTCAGCCAGAAACAGCT
GTTTTGTCCAGTTTTTGCGCTTTCGGAAGCTCAATATCTCGAGTTAGGTA
CTGAAATCGCCTATACTCGCAATATATCATTAATCTTGATTTTTTGAGAG
CTTTCCAAAAATATACAACAGGTCTCCGTTTTCTCAAGCTAAAATTTTCA
TTAATTTTTCACCCTATGATTTTTGCCTGAGACCNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCAA
AGTGTCCGAAAAAAAATTGGCACCCAAGTTATTTTGATTCCCCTACCCCT
TAGCTTTCCAAAAATGTATAACAAGTGCTTTGACTAAGAAATTCGAGCGA
TTTTACAAATTTTACCCTACTACTTCCACTTTCTTTCATTGAATATTTCG
ATTTTGGAGGGGTTCGTTGGTTTCTAGGCTATATTGCAAGCCTTATTGGA
GCAAATTTTAGGTTTAAAATCCTGACAGATCCTGAGATCTTAATGGCCTA
AGTCTTTAAGTCTCATGTTAAAACTCAGAGTTAAAACTCTATTTTCCAAC
TGTAGTTTTAACGCGCTTAAAATCATTTGTAGTGTTTAAAATTTCGCAGG
GAAATCCCCTTTGGTTCAAATATCTTGTCCATGATTGTAACACGAACAAA
TAATACAACACTAAAAAATATTTGTCCTCATGGAACCAAAATGTTTTGTT
GCCTTGCATTTACTGAACGAATGATGAAAGTATATGTTTTTTTTTCTCTC
AGGAAATGACAGAAAATCGCATACCAGTTGTGACTCATGAAGTGGGTAAG
TCCCGGGGGGGAGGGGGCACTCGATTTTGAAAACGACCGTACGTTCGGCA
AAAATCAGGTCTCCAAAATCGGACCCTTACAGTGCAGGAAAAATTTGGCT
GAAAATCGACCCTTACAGTGCAATTTTTCAAAAAAATTGGAAATTTCTCA
AATTTTACCTCAAAATTTGGTATTTTCTCAAATTTTACATCCTTACAGTG
CACTTTTTCCCACTTGCTCACAAATCAACCCTTACAGTGCACTTTCCAAA
GTCCAAAAACCTACCCTTAAGGGCCGCAGGTCCGGTAGATCACTTACCTG
GAGTGCCCTCCCCCCCCCCTGGGGTAAGTTTGATCTTGAGGTTTAACTTT
TTAATATGACAAAATTTCTAGTGCGGGGCTTTTCAGATTTTAATAAAGAA
AGTTCTTTGAGTCATATTTGAACAGACGTTCTTAAAAATTGAGGGCGCCC
GGGATCAAAGGGGAGAGTCTCCGTTAAAATGGATTAGAAACGAACGTAAT
TTTCCGTTTTAGTACCGGATGCATTGCGAACGAAATACGAACCGGACGTC
GAGAAAGTAGAGGAAGAACTCACTTTACAATCCAACTCCATCTCTGTTGA
TATGGCTAGGGTAAGAATTCACAAACAACGTTTATGATGGATGGGAAAGT
GCTATTTTCAATGTTTTGAAAAAAGTATTTTAATTGGATTAATTTTCGCG
CGGACTTTTCTTTTGCAAATTGAGAATCTAAAAATTTCGCGCGGATTACG
CGAATCAGCTTTTTTTTCACCTACTGTAATTACTTTCATTTTCCTAGGGT
TTTTGGCTGAAATTCGGATTTTTAATTTTTAGTGAGGACTAAATTTCGCG
AAAAGGGCCCAAATTCGCGAAAATTGCGAAAATTAATCCACGTGAAATTT
AATTATCACAAAAATAGCCTTTTTTTCCTCATTTTTCACGCACCAGATTC
AGGGTCGTGATCGTGATCGTTTTTGCAATTATTTCAAAGGGATCAAGACA
GGTCGTGACTGAATCTCGAAAATAAGTTTCTGATTTTTTTTTTTTTACCT
TTTTATTTTCTTTATTTGCTAAATTCGTAGATTTCTTTCTTTTCCTTACA
TAATAAGTTACTTATCTATACTCGTTTTCCCTTACCATTTCAGTCTCAAG
TAGTAGCGTTGAACGATCTGATTGGCTCCATGTTGGATTTGATACAAAAC
AGTCGCGATTGGGAAACGGAAAGTTCGGTGGAGCAAGCAGACTTAGCGCC
GTCAGCAAACGATACCAACATCCTCTTGGCTGCCATCACGCAAGGCTCTG
GTAAGTTCTACACCTATCATCCAAAGAAGTATAAGCCCGAAGGGCTAGAA
TCGAATCTTTAAAATTTCTCAGGCAAGAAAAATTGAAGCCTTAAAATATG
CGCCGTGTTTTTGACGACGGATTGAATCTAGCGATTCCTTTGCTTTAGAG
TCATATCTTTTTCGAAATTTAGATCTAAATTTTAGTTTTAGTCTGTCATT
TGTGTAAAAACTCAGCGGACCGCGCTAGGCCGCGCAACTTTGGTAGGATT
TGGCAGGCTTCAAATCCTACCAAGGAGATTCGATTCTAGCCCTTTGGACT
TATACTTCATATTGCTGTCTTCTCTTACAGCTCGTATTCTTTGTTGAAAA
TAGGGTTTTTTCATCACCAGCTTCTTTCAAAGTTCTTAGAATTAGAGTAA
TAGTACTGAGAAAGTGTAAAATTTGAATACTGTAGATTAATGAATAAATT
TTCTTATCTTTTTAGGATTACGAAAGTCGTCGAGTAAGTTTTATCCATTT
TCACTCATTAATTTGATGCAAAAGTTAATTTCTTTAAATTTCTTGACAAG
GCAATTAGCGGAGTTCTCTCAAAAAACTCTTTAACGAAGGTTAATTTTCG
CAAAGATTACAATTTCCTCAAGTTAGCGAGAGTAAAGGTTGTATTTTTCG
CGATTTTTCGACCTCGTGAAAATTTCTGCTCACAAAAGTTTGTCTAAATT
ATATTCCGGTACTTTTAAAAAACCGATGCATCATACTGTCCCTTTATAAT
ATTCGACAAGTAAAAGTAGAGCATTTTATATTCATAACATTCTGACTGAT
ATAGAAATGACGAAATTTTTCAGCATGTTTTACCTACACACGACCAGATC
CTGCAAACCGCTCCCTTTGAAGTTAAGCCGAAGACATCCTTGTGTTGTTT
TGTTGTTTTTTCGAATTGTACATACTTGTGTTATTTATTGCGTGAAAATC
CAGACATATTTTATATTACGTTTCAAAGTGCGAGTCTATTCCCTTTTTTT
TGACTTCTTAGTAATTACTCTTGTCTCCCGAATAGACGGGGGGAGGGGGT
AGGAAAATTTTTTAAAGCAGGGGGGGGGTAGAATAAGAGAGGGTTAATTT
GAAGACAGAATTTTTTTAACTGGTATCAATTTCAACAGCAAAAAAGAAAC
TTTAACAAATGAACACGTAAAATAAGAACCAATACTAACAAAAAGGAAAA
TTTTAGCCTGTGTAAGGTCTATCTACACTGTAATGAAATATTGAATTAAT
CGAATTTAATTAGCGGGGGTGGATGTTATTTCTCTTATAACATTTAGTGG
GGGGCGTTTATTCGGGAGATAAGAGCATGCACTTCCTGAAAATTAAATAC
CCTAGTAAATTTTGAGTTGATCAAGTTGAATGAATTTGGTGAAAGAGAGG
CTGATTCGCAAAGTCTTGTCCTTAGATTTTAAATTCAAACTTACTTCAAG
CATAAGTACGTGGTCGAAAAATCGAGACATTAATGATATATCTATTGCCT
TTCGCGACACTGTAACTTTATTGGCTAAATTGCTTGCATTCTTTCTTCCT
GTAACCTTAAGTTTTATAGGTTTTCTACATTCGAAAGCATAAAATTTTTT
CGAAAAGGCCAAAAGATTGAACGAACAAAAATTGGTTCTCGAACTCTCAT
GCAAGGATACTGATAGTATTTGCGATGAAAACAATTTAGCAAGCGGGAAG
ATTTCTTTTAATNAAACTCTCATACAAGGATACTGATAGTATTTGCGATG
AAAACAATTTAGCAAGCGGGAAGATTTCTTTTAATAGGTCAGGTGGCTTG
TAGAGCGCATATCTTTAATCATAGAAATTTTAGCGAGACTAATTTTAGCG
AGTTTTCCCTATCTTCGCTAAAATAAATCTCGCTAAAACACGCCGAATCG
CCAGATCGCTAAAATTTATCCGCGCGAAATTTCTGGTTGTATTGCCTTGA
TACATTTTTATCAATAGAAAGGGTTTCAGTGCAAAGAAATGCTAGAAAAC
GAATTCAATCAATAATGTGATACGAGTGTTCGCTAAAATTAATAAATAAA
TCCAAAAAAATCAAGATTTTCCTGACTCGCTAATATACGCTAAAATTAGT
CTCGCTAAAATTTCTACGATTATAGTATCTTATGAAATATTTTTTGGGTC
GGTTATTTCCAGGTTCACGAAGTTCCTCACAGCGAAGTTCATCGCAACAG
CGAAGCAGTTCGCACCACCATTAGAATTTTAATGTAAAATAGCTTTTTCA
TTTTTATTGTAGTATAATATTTTTTAAATTGTCAATATATACAAAATTTA
ACGAATAAAATCAAATTGTAAAATTTATTTCATCTGAATTATCAGCCTTT
CCAAGAAACCGAAAACTTTTCGGGTTGATGGAGAAAAACTTGTTAGGGTC
GTAAAATGATTCTTCGTACGTGTTTAGCTTCCATGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010554XLOC_010554Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018852-exon-sc0000309-1575043694:222327..222648TCONS_00018852-exon-sc0000309-1575043694:222327..222648Clytia hemisphaericaexon
TCONS_00018852-exon-sc0000309-1575043694:221044..221159TCONS_00018852-exon-sc0000309-1575043694:221044..221159Clytia hemisphaericaexon
TCONS_00018852-exon-sc0000309-1575043694:220878..220912TCONS_00018852-exon-sc0000309-1575043694:220878..220912Clytia hemisphaericaexon
TCONS_00018852-exon-sc0000309-1575043694:220240..220349TCONS_00018852-exon-sc0000309-1575043694:220240..220349Clytia hemisphaericaexon
TCONS_00018852-exon-sc0000309-1575043694:216604..216646TCONS_00018852-exon-sc0000309-1575043694:216604..216646Clytia hemisphaericaexon
TCONS_00018852-exon-sc0000309-1575043694:215989..216086TCONS_00018852-exon-sc0000309-1575043694:215989..216086Clytia hemisphaericaexon
TCONS_00018852-exon-sc0000309-1575043694:215299..215455TCONS_00018852-exon-sc0000309-1575043694:215299..215455Clytia hemisphaericaexon
TCONS_00018852-exon-sc0000309-1575043694:214816..214833TCONS_00018852-exon-sc0000309-1575043694:214816..214833Clytia hemisphaericaexon
TCONS_00018852-exon-sc0000309-1575043694:212863..213136TCONS_00018852-exon-sc0000309-1575043694:212863..213136Clytia hemisphaericaexon
TCONS_00018852-exon-sc0000309-1510915933:222327..222648TCONS_00018852-exon-sc0000309-1510915933:222327..222648Clytia hemisphaericaexon
TCONS_00018852-exon-sc0000309-1510915933:221044..221159TCONS_00018852-exon-sc0000309-1510915933:221044..221159Clytia hemisphaericaexon
TCONS_00018852-exon-sc0000309-1510915933:220878..220912TCONS_00018852-exon-sc0000309-1510915933:220878..220912Clytia hemisphaericaexon
TCONS_00018852-exon-sc0000309-1510915933:220240..220349TCONS_00018852-exon-sc0000309-1510915933:220240..220349Clytia hemisphaericaexon
TCONS_00018852-exon-sc0000309-1510915933:216604..216646TCONS_00018852-exon-sc0000309-1510915933:216604..216646Clytia hemisphaericaexon
TCONS_00018852-exon-sc0000309-1510915933:215989..216086TCONS_00018852-exon-sc0000309-1510915933:215989..216086Clytia hemisphaericaexon
TCONS_00018852-exon-sc0000309-1510915933:215299..215455TCONS_00018852-exon-sc0000309-1510915933:215299..215455Clytia hemisphaericaexon
TCONS_00018852-exon-sc0000309-1510915933:214816..214833TCONS_00018852-exon-sc0000309-1510915933:214816..214833Clytia hemisphaericaexon
TCONS_00018852-exon-sc0000309-1510915933:212863..213136TCONS_00018852-exon-sc0000309-1510915933:212863..213136Clytia hemisphaericaexon
TCONS_00018852-exon-sc0000309-1491911889:222327..222648TCONS_00018852-exon-sc0000309-1491911889:222327..222648Clytia hemisphaericaexon
TCONS_00018852-exon-sc0000309-1491911889:221044..221159TCONS_00018852-exon-sc0000309-1491911889:221044..221159Clytia hemisphaericaexon
TCONS_00018852-exon-sc0000309-1491911889:220878..220912TCONS_00018852-exon-sc0000309-1491911889:220878..220912Clytia hemisphaericaexon
TCONS_00018852-exon-sc0000309-1491911889:220240..220349TCONS_00018852-exon-sc0000309-1491911889:220240..220349Clytia hemisphaericaexon
TCONS_00018852-exon-sc0000309-1491911889:216604..216646TCONS_00018852-exon-sc0000309-1491911889:216604..216646Clytia hemisphaericaexon
TCONS_00018852-exon-sc0000309-1491911889:215989..216086TCONS_00018852-exon-sc0000309-1491911889:215989..216086Clytia hemisphaericaexon
TCONS_00018852-exon-sc0000309-1491911889:215299..215455TCONS_00018852-exon-sc0000309-1491911889:215299..215455Clytia hemisphaericaexon
TCONS_00018852-exon-sc0000309-1491911889:214816..214833TCONS_00018852-exon-sc0000309-1491911889:214816..214833Clytia hemisphaericaexon
TCONS_00018852-exon-sc0000309-1491911889:212863..213136TCONS_00018852-exon-sc0000309-1491911889:212863..213136Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000309supercontigsc0000309:212863..222648 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.42707	4.09368	3.43049	5.65023	10.4711	8.82067	2.77009	5.42752	0.191728	0	0.483548	0.953868	0.220956	0.366389	0.580622	0.219032	0.704636	0.806062	0	0.252934	0.587334	0	2.08759	1.05481	2.41011	2.30133	1.38641	0	0.742938	1.63035
Blast
[Close]
BLAST of TCONS_00018852 vs. Swiss-Prot (Human)
Match: MED8 (Mediator of RNA polymerase II transcription subunit 8 OS=Homo sapiens GN=MED8 PE=1 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 2.517e-44
Identity = 83/195 (42.56%), Postives = 129/195 (66.15%), Query Frame = 2 
Query:  323 EKEENVIATSLQNLIGRVSDIKMSIQNFMFKLEHET--LSWPQMLDNFALLSGQISTLNKLLKNDRMPVLRNLCILPLMVSQERDTEMEEMTENRIPVVTHEVVPDALRTKYEPDVEKVEEELTLQSNSISVDMARSQVVALNDLIGSMLDLIQNSRDWETESSVEQADLAP-----SANDTNILLAAITQGSGL 886
            ++EE  +  SL  L+ +V+D+K S+ +F+ KLE+E   L+WP +LD+FALLSGQ++TLNK+LK+++ P+ RN  I+PL++S +RD ++   TE R+PV +HEVVPD LRTK +P+VE+ E++LT  +  I  D A+ Q+ +LN +  ++L+ I      + E   E   L P     +  DTN L+AA+  G GL
Sbjct:    2 QREEKQLEASLDALLSQVADLKNSLGSFICKLENEYGRLTWPSVLDSFALLSGQLNTLNKVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQEKQLTTDAARIGADAAQKQIQSLNKMCSNLLEKIS-----KEERESESGGLRPNKQTFNPTDTNALVAAVAFGKGL 191
The following BLAST results are available for this feature:
BLAST of TCONS_00018852 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MED82.517e-4442.56Mediator of RNA polymerase II transcription subuni... [more]
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