TCONS_00018851 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018851
Unique NameTCONS_00018851
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length920

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018851 ID=TCONS_00018851|Name=TCONS_00018851|organism=Clytia hemisphaerica|type=transcript|length=920bp
tcaggtttgatttttatattttaaaggAAGGACACTTGGAGATCCATAAC
ATATAATAAAAACCATTAAAGAAAagccattttaccaaaaaaaatatGCA
GCAGGAAAAAGAAGAGAATGTCATTGCAACGTCACtgcaaaatttgattg
gtcgcgTCAGTGATATCAAGATGTCcatccaaaatttcatgtttaaatTG
GAACATGAAACTCTCTCTTGGTCAAATCAGCACATTGAACAAACTTCTGA
AGAACGATCGAATGCCAGTGTTGAGGAATCTTTGCATTTTGCCACTGATG
GTCAGTCAAGAACGTGACACTGAGATGGAGgAAATGACAGAAAATCGCAT
ACCAGTTGTGACTCATGAAGTGGTACCGGATGCATTGCGAACGAAATACG
AACCGGACGTCGAGAAAGTAGAGGAAGAACTCACTTTACAATCCAACTCC
ATCTCTGTTGATATGGCTAGGTCTCAAGTAGTAGCGTTGAACGATCTGAT
TGGCTCCATGTTGGATTTGATACAAAACAGTCGCGATTGGGAAACGGAAA
GTTCGGTGGAGCAAGCAGACTTAGCGCCGTCAGCAAACGATACCAACATC
CTCTTGGCTGCCATCACGCAAGGCTCTGGATTACGAAAGTCGTCGAGTTC
ACGAAGTTCCTCACAGCGAAGTTCATCGCAACAGCGAAGCAGTTCGCACC
ACCATTAGAATTTTAATGTAAAAtagctttttcatttttattgtagtata
atattttttaaattgtcaatatatacaaaatttaacgaataaaatcaaat
tgtaaaatttatttcatcTGAATTATCAGCCTTTCCAAGAAACCGAAAAC
TTTTCGGGTTGATGGAGAAAAACTTGTTAGGGTCGTAAAATGATTCTTCG
TACGTGTTTAGCTTCCATGT
Run BLAST on NCBI

transcript from alignment at sc0000309:212863..222430-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018851 ID=TCONS_00018851|Name=TCONS_00018851|organism=Clytia hemisphaerica|type=transcript|length=9568bp|location=Sequence derived from alignment at sc0000309:212863..222430- (Clytia hemisphaerica)
TCAGGTTTGATTTTTATATTTTAAAGGAAGGACACTTGGAGATCCATAAC
ATATAATAAAAACCATTAAAGAAAAGCCATTTTACCAAAAAAAATATGCA
GCAGGTGTGTACAATTTTCCAAAAAAATCTGTTTTATAAGTAGTTACAAA
TTATTTTTGAAACAGTTCTAAATGATAATAAAAGGTATATCAGTGTTGCA
AATTTTTGGAATGTACAGGTATGTAGACGGAAAATCTGGCCATTGAGATA
AACAAGAATGATTTTGATCAAATAACTCCTCACTAAACCAAACGATTCAG
AAAATCTAGTCGGTGCTTTGGATCCCTACTTTGCAGGCGTTTTTAATTTG
TAAAGCGTGTGTCATTTAGTTCATTTTCTTTAAAAACATTTCTTAAAGAG
TACAATCTATACGTCACTGTTATTTTAGGAAAAAGAGGAGAATGTCATTG
CAACGTCACTGCAAAATTTGATTGGTCGCGTCAGTGATATCAAGATGTCC
ATCCAAAATTTCATGTTTAAATTGGAACATGAAACTCTCTCTTGGTAAGG
GTCTTTTTTCATTACAATAAATTTCTTCTTTTTTGCTCATTGTGACTACC
ATGCTAAGCGTGCTTAACGAAATAGAATAACAGTTGAATTGACTTTACTA
TTTTTTTATCATTAAAATTCTGTAGGCCTCAGATGTTGGACAATTTCGCC
TTGTTATCGGGTATTTTACTACAATTACTTTATTAAAATTTATATTATAC
AATTTTTTGAGTGGGATCACAATTTAACAAAACATTAATTTTGCTTTATT
GCGATCATTGCTTTCACAAAATAAGAGTTATATGTAATCAATACACCNTT
TGATTTTTATATTTTAAAGGAAGGACACTTGGAGATCCATAACATATAAT
AAAAACCATTAAAGAAAAGCCATTTTACCAAAAAAAATATGCAGCAGGTG
TGTACAATTTTCCAAAAAAATCTGTTTTATAAGTAGTTACAAATTATTTT
TGAAACAGTTCTAAATGATAATAAAAGGTATATCAGTGTTGCAAATTTTT
GGAATGTACAGGTATGTAGACGGAAAATCTGGCCATTGAGATAAACAAGA
ATGATTTTGATCAAATAACTCCTCACTAAACCAAACGATTCAGAAAATCT
AGTCGGTGCTTTGGATCCCTACTTTGCAGGCGTTTTTAATTTGTAAAGCG
TGTGTCATTTAGTTCATTTTCTTTAAAAACATTTCTTAAAGAGTACAATC
TATACGTCACTGTTATTTTAGGAAAAAGAAGAGAATGTCATTGCAACGTC
ACTGCAAAATTTGATTGGTCGCGTCAGTGATATCAAGATGTCCATCCAAA
ATTTCATGTTTAAATTGGAACATGAAACTCTCTCTTGGTAAGGGTCTTTT
TTCATTACAATAAATTTCTTCTTTTTTGCTCATTGTGACTACCATGCTAA
GCGTGCTTAACGAAATAGAATAACAGTTGAATTGACTTTACTATTTTTTT
ATCATTAAAATTCTGTAGGCCTCAGATGTTGGACAATTTCGCCTTGTTAT
CGGGTATTTTACTACAATTACTTTATTAAAATTTATATTATACAATTTTT
TGAGTGGGATCACAATTTAACAAAACATTAATTTTGCTTTATTGCGATCA
TTGCTTTCACAAAATAAGAGTTATATGTAATCAATACACCTTAAAGGAAG
AAATTTTGGTGGGAATTTAATTTGGTGGTTGCAGGATTTGTTTTGGCCAA
AATCGTTATCAAATAAGCAAAAAAACCTGTTTTAAGGCCTGAAATGGCAC
CAATTTGGGGAATGCGTTTTAAATAAAATAAATTTGGCAGGAATTTAGTT
TGGCGGATGGAGGAAAGAATAAACTTTGGCGGGAACTTAAATTGGCTAAA
TCAGCCAAATCAGCCAAGTTTTCTTTCCGCCAAAATTTCTTCCTTTAAGG
TATATAGTTTTTTGTCAGCAACATTTTCGATCTAATTAGAATCCATGTAG
GTGTGGTGTAATCATCTTTAAATTTATTTTACGGCAGTCAAATTTGAAGC
GATTCTTTACAGTTATTATTTTTATCGGTAGGTCAAATCAGCACATTGAA
CAAACTTCTGAAGAACGATCGAATGCCAGTGTTGAGGAATCTTTGCATTT
TGCCACTGATGGTCAGTCAAGAACGTGACACTGAGATGGAGGTAAGTTTA
TCTTTACTTCAAAAGTATTTTAAGACCTGCAGAGATCCCACTCGGCATGT
TTTTCATGATTTTCATGATTTTTGCAAATTTGGCATTTTTCATGGTTTTT
AGCATGTTTTGGATCATTTTGGCATGTTTTTCAGAGAATCATTAGGGAAT
TTTGTTTATATTGTCTCTTCTCTGTCCTGATATTCAGATTCATTAAAGAT
AGCTCAAAATAGCACTTTCAGCCCCCAAAAATTCTAAAATTTTCTGACTT
GCCCAACCATGGTGGGCAACGTTAAATATTATCTTAAGTTTTCAATAAAT
ACCATTGACAGAAATGTTAAAACAAGGATGTGTCAGGCAGGGGATCCATC
TTTTCCAATGCTTCATAGGGAGGTGGGAGATTTCCCGAAAAAAATGAGGG
GGTTTAAGATTTTAGAGGGGGGGTCAAGTAAAAATAGGGGGGATAACAAC
TTTTGGTCAAAATATCTATCATATTTATATTGATTTAGTTATTTGGTATG
GGACAACTAAAAAACAAGTGTAGATAGCTAAATCTTTGCCTGCGGCACCA
TGTTAAACTCTTTTTTTTCATATAATTTTTTATACAAATTTCAATGTTTT
CGGTTTTGAATGACTGGTGGACTGCTGCTGTCAATAGCACGGGCTCGAAT
TTTTTTTTTAATAGGGGGATACACATATAGGGGGATGAAATAAAAATAGG
GGGTTTAGATTACTCTGCACACTATGTTTTTCTCCGTTCAAGCTCTACTT
TATAAAACAAGTAGCCAATATTTGGAAGTTTTGTCAAGACTACATGTCAC
TGAACCACCTCATTATTCTTCCAGGGTTTAGACAGGTCCATGACCTCGGC
AAAACACAGGGTTTTTTTAAAGAACCAATTTTTAAAATGTCTCTTGCATT
ATAGCTTGTATTCTAGTGTCTGGATATACATGATTTTTAAATATTTCTCC
TTTGGGGCCAACTTTGGTTTTTTCAGGAACAGGGCTCCCTAAGCTAAAAT
TTGCCTTATGTACATTTTTCTGATTCTTACTTATATTGTTCCTACATTTC
AATCAGTTATTGGACCTACCTTATTGGAGGTTCTATAAATTAACCCATGT
CCGTTCGTTCGTTCGTCTGTCCGTCCGTCTGTTACCAGCTTTTCTCAGAA
TTGGCTCATTAGTTTTTTCTGACTTTTTGCACAATGATGCAAAATGGCAA
TGCCCAGAACGTGACGGAGCCCGATTTTTGAGAACAAATTTATTTGGGCA
AATTTGGGCCAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATAGGG
TTTTTTAGACTTTGTGCAAAATCCTGTCATTACTTTTTTCTGATTTTTTG
TACAAAGATGGAGGGCAAGATTCTCTAAAGAATGGCTGAGGTGATTTTTC
CTGGAAAATTCTTATTCGCCTTAAAAAACGGATTTTTGTATTTTGGGGAA
ATTCCCTATAACCAAATAAGAAAATATACCTTTTCTCAACGTTGACTCGT
TATTTTTTTCTGATTTTTTTGCACAATGATGCAAAATGGCAATGCCTAAA
ATGTGTCAGAGCCCGATTTTCGAAAAAAAAATATATTTGGGCAAATTTGG
GCCAAAAACTGCCTAAAAATAGGGTTTTTTGGACTTTGTGCAAAATCCTG
TCATTACTATTTTCTGATTTTTTGTACAAAGATGGAGGGCAAGATTCTCT
AAAGAATGGCTGAAGTGGTTTTTCCTGGAAAATTCTTATTCGCCTTAAAA
AACGGATTTTCGTATTTTGGGGAAATTCCTTTTAACCAAATAAGAAAATA
TAGCTTTTCTCAAAGTTGACTCATTATTTTTTTCTGATTTTTTGCACAAT
GATGCAAAATGGCAATGCCCAAAATGTGACGGAGCCAGATTTTTACGGAA
AATTATTTTGAGCAAATTTGGGCCAAAAACAGCTTAAAAGGTTTTTTGGG
CCTGAATGGTTTAAATGATTTTCGTATTTGGGGAAATTCCTTTTTACCAT
TTTACATTATTCAACACACAAGCTTTATTTTTCCATTCTGAATTTTTGTA
CAATTATTGTCACTTTTTTCTTATTTTCATCTGATGTTAATCATTAGGTA
CAGGTCCATTCAGCATGTTGCTTGTTTTCTATTTAGTTTTCCACCCTTGA
AAAGAGACTTTTTTTGCATCTTGAAAATCAGAAACTTTTCCTATTGTCCA
ACCATGGTGGGCTACATTTTGAATTGCAGCCTTTGATTGATTAATAAATT
CCAAGTGAAATGATTTCTACTTATGTTTGTGTTATTTATTAGATTATATA
TCGATTTCTCATCATGTCTACATCAATGGTTTTAGGTACGGGAAACACGG
GGACTTCGTTGATTAATAACTCTACTTTTTAGCATGTTTTTCATGTTTTC
CATTTAAAATTAGCATTATTTAGCATTTTTTTCTGCTCTTTTTGGCATTT
TTTTATGCATGTTTTTTCAAAAATGCCAGTGGGATCTCTGGACCTGTTGT
ATATTTTTGAAAAGCTCTCAAAAAATTAAGATTAGTGATATATTGCGAGT
ATAGGTGATTTCTTTACCTAACTCGAGATATTAATCCTTTAAAAACAGTA
CATTTTTCTGTGTTTTTCAGCCAGAAACAGCTGTTTTGTCCAGTTTTTGC
GCTTTCGGAAGCTCAATATCTCGAGTTAGGTACTGAAATCGCCTATACTC
GCAATATATCATTAATCTTGATTTTTTGAGAGCTTTCCAAAAATATACAA
CAGGTCTCCGTTTTCTCAAGCTAAAATTTTCATTAATTTTTCACCCTATG
ATTTTTGCCTGAGACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNACCAAAGTGTCCGAAAAAAAATT
GGCACCCAAGTTATTTTGATTCCCCTACCCCTTAGCTTTCCAAAAATGTA
TAACAAGTGCTTTGACTAAGAAATTCGAGCGATTTTACAAATTTTACCCT
ACTACTTCCACTTTCTTTCATTGAATATTTCGATTTTGGAGGGGTTCGTT
GGTTTCTAGGCTATATTGCAAGCCTTATTGGAGCAAATTTTAGGTTTAAA
ATCCTGACAGATCCTGAGATCTTAATGGCCTAAGTCTTTAAGTCTCATGT
TAAAACTCAGAGTTAAAACTCTATTTTCCAACTGTAGTTTTAACGCGCTT
AAAATCATTTGTAGTGTTTAAAATTTCGCAGGGAAATCCCCTTTGGTTCA
AATATCTTGTCCATGATTGTAACACGAACAAATAATACAACACTAAAAAA
TATTTGTCCTCATGGAACCAAAATGTTTTGTTGCCTTGCATTTACTGAAC
GAATGATGAAAGTATATGTTTTTTTTTCTCTCAGGAAATGACAGAAAATC
GCATACCAGTTGTGACTCATGAAGTGGGTAAGTCCCGGGGGGGAGGGGGC
ACTCGATTTTGAAAACGACCGTACGTTCGGCAAAAATCAGGTCTCCAAAA
TCGGACCCTTACAGTGCAGGAAAAATTTGGCTGAAAATCGACCCTTACAG
TGCAATTTTTCAAAAAAATTGGAAATTTCTCAAATTTTACCTCAAAATTT
GGTATTTTCTCAAATTTTACATCCTTACAGTGCACTTTTTCCCACTTGCT
CACAAATCAACCCTTACAGTGCACTTTCCAAAGTCCAAAAACCTACCCTT
AAGGGCCGCAGGTCCGGTAGATCACTTACCTGGAGTGCCCTCCCCCCCCC
CTGGGGTAAGTTTGATCTTGAGGTTTAACTTTTTAATATGACAAAATTTC
TAGTGCGGGGCTTTTCAGATTTTAATAAAGAAAGTTCTTTGAGTCATATT
TGAACAGACGTTCTTAAAAATTGAGGGCGCCCGGGATCAAAGGGGAGAGT
CTCCGTTAAAATGGATTAGAAACGAACGTAATTTTCCGTTTTAGTACCGG
ATGCATTGCGAACGAAATACGAACCGGACGTCGAGAAAGTAGAGGAAGAA
CTCACTTTACAATCCAACTCCATCTCTGTTGATATGGCTAGGGTAAGAAT
TCACAAACAACGTTTATGATGGATGGGAAAGTGCTATTTTCAATGTTTTG
AAAAAAGTATTTTAATTGGATTAATTTTCGCGCGGACTTTTCTTTTGCAA
ATTGAGAATCTAAAAATTTCGCGCGGATTACGCGAATCAGCTTTTTTTTC
ACCTACTGTAATTACTTTCATTTTCCTAGGGTTTTTGGCTGAAATTCGGA
TTTTTAATTTTTAGTGAGGACTAAATTTCGCGAAAAGGGCCCAAATTCGC
GAAAATTGCGAAAATTAATCCACGTGAAATTTAATTATCACAAAAATAGC
CTTTTTTTCCTCATTTTTCACGCACCAGATTCAGGGTCGTGATCGTGATC
GTTTTTGCAATTATTTCAAAGGGATCAAGACAGGTCGTGACTGAATCTCG
AAAATAAGTTTCTGATTTTTTTTTTTTTACCTTTTTATTTTCTTTATTTG
CTAAATTCGTAGATTTCTTTCTTTTCCTTACATAATAAGTTACTTATCTA
TACTCGTTTTCCCTTACCATTTCAGTCTCAAGTAGTAGCGTTGAACGATC
TGATTGGCTCCATGTTGGATTTGATACAAAACAGTCGCGATTGGGAAACG
GAAAGTTCGGTGGAGCAAGCAGACTTAGCGCCGTCAGCAAACGATACCAA
CATCCTCTTGGCTGCCATCACGCAAGGCTCTGGTAAGTTCTACACCTATC
ATCCAAAGAAGTATAAGCCCGAAGGGCTAGAATCGAATCTTTAAAATTTC
TCAGGCAAGAAAAATTGAAGCCTTAAAATATGCGCCGTGTTTTTGACGAC
GGATTGAATCTAGCGATTCCTTTGCTTTAGAGTCATATCTTTTTCGAAAT
TTAGATCTAAATTTTAGTTTTAGTCTGTCATTTGTGTAAAAACTCAGCGG
ACCGCGCTAGGCCGCGCAACTTTGGTAGGATTTGGCAGGCTTCAAATCCT
ACCAAGGAGATTCGATTCTAGCCCTTTGGACTTATACTTCATATTGCTGT
CTTCTCTTACAGCTCGTATTCTTTGTTGAAAATAGGGTTTTTTCATCACC
AGCTTCTTTCAAAGTTCTTAGAATTAGAGTAATAGTACTGAGAAAGTGTA
AAATTTGAATACTGTAGATTAATGAATAAATTTTCTTATCTTTTTAGGAT
TACGAAAGTCGTCGAGTAAGTTTTATCCATTTTCACTCATTAATTTGATG
CAAAAGTTAATTTCTTTAAATTTCTTGACAAGGCAATTAGCGGAGTTCTC
TCAAAAAACTCTTTAACGAAGGTTAATTTTCGCAAAGATTACAATTTCCT
CAAGTTAGCGAGAGTAAAGGTTGTATTTTTCGCGATTTTTCGACCTCGTG
AAAATTTCTGCTCACAAAAGTTTGTCTAAATTATATTCCGGTACTTTTAA
AAAACCGATGCATCATACTGTCCCTTTATAATATTCGACAAGTAAAAGTA
GAGCATTTTATATTCATAACATTCTGACTGATATAGAAATGACGAAATTT
TTCAGCATGTTTTACCTACACACGACCAGATCCTGCAAACCGCTCCCTTT
GAAGTTAAGCCGAAGACATCCTTGTGTTGTTTTGTTGTTTTTTCGAATTG
TACATACTTGTGTTATTTATTGCGTGAAAATCCAGACATATTTTATATTA
CGTTTCAAAGTGCGAGTCTATTCCCTTTTTTTTGACTTCTTAGTAATTAC
TCTTGTCTCCCGAATAGACGGGGGGAGGGGGTAGGAAAATTTTTTAAAGC
AGGGGGGGGGTAGAATAAGAGAGGGTTAATTTGAAGACAGAATTTTTTTA
ACTGGTATCAATTTCAACAGCAAAAAAGAAACTTTAACAAATGAACACGT
AAAATAAGAACCAATACTAACAAAAAGGAAAATTTTAGCCTGTGTAAGGT
CTATCTACACTGTAATGAAATATTGAATTAATCGAATTTAATTAGCGGGG
GTGGATGTTATTTCTCTTATAACATTTAGTGGGGGGCGTTTATTCGGGAG
ATAAGAGCATGCACTTCCTGAAAATTAAATACCCTAGTAAATTTTGAGTT
GATCAAGTTGAATGAATTTGGTGAAAGAGAGGCTGATTCGCAAAGTCTTG
TCCTTAGATTTTAAATTCAAACTTACTTCAAGCATAAGTACGTGGTCGAA
AAATCGAGACATTAATGATATATCTATTGCCTTTCGCGACACTGTAACTT
TATTGGCTAAATTGCTTGCATTCTTTCTTCCTGTAACCTTAAGTTTTATA
GGTTTTCTACATTCGAAAGCATAAAATTTTTTCGAAAAGGCCAAAAGATT
GAACGAACAAAAATTGGTTCTCGAACTCTCATGCAAGGATACTGATAGTA
TTTGCGATGAAAACAATTTAGCAAGCGGGAAGATTTCTTTTAATNAAACT
CTCATACAAGGATACTGATAGTATTTGCGATGAAAACAATTTAGCAAGCG
GGAAGATTTCTTTTAATAGGTCAGGTGGCTTGTAGAGCGCATATCTTTAA
TCATAGAAATTTTAGCGAGACTAATTTTAGCGAGTTTTCCCTATCTTCGC
TAAAATAAATCTCGCTAAAACACGCCGAATCGCCAGATCGCTAAAATTTA
TCCGCGCGAAATTTCTGGTTGTATTGCCTTGATACATTTTTATCAATAGA
AAGGGTTTCAGTGCAAAGAAATGCTAGAAAACGAATTCAATCAATAATGT
GATACGAGTGTTCGCTAAAATTAATAAATAAATCCAAAAAAATCAAGATT
TTCCTGACTCGCTAATATACGCTAAAATTAGTCTCGCTAAAATTTCTACG
ATTATAGTATCTTATGAAATATTTTTTGGGTCGGTTATTTCCAGGTTCAC
GAAGTTCCTCACAGCGAAGTTCATCGCAACAGCGAAGCAGTTCGCACCAC
CATTAGAATTTTAATGTAAAATAGCTTTTTCATTTTTATTGTAGTATAAT
ATTTTTTAAATTGTCAATATATACAAAATTTAACGAATAAAATCAAATTG
TAAAATTTATTTCATCTGAATTATCAGCCTTTCCAAGAAACCGAAAACTT
TTCGGGTTGATGGAGAAAAACTTGTTAGGGTCGTAAAATGATTCTTCGTA
CGTGTTTAGCTTCCATGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010554XLOC_010554Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018851-exon-sc0000309-1575043694:222327..222430TCONS_00018851-exon-sc0000309-1575043694:222327..222430Clytia hemisphaericaexon
TCONS_00018851-exon-sc0000309-1575043694:221044..221159TCONS_00018851-exon-sc0000309-1575043694:221044..221159Clytia hemisphaericaexon
TCONS_00018851-exon-sc0000309-1575043694:220240..220349TCONS_00018851-exon-sc0000309-1575043694:220240..220349Clytia hemisphaericaexon
TCONS_00018851-exon-sc0000309-1575043694:216604..216646TCONS_00018851-exon-sc0000309-1575043694:216604..216646Clytia hemisphaericaexon
TCONS_00018851-exon-sc0000309-1575043694:215989..216086TCONS_00018851-exon-sc0000309-1575043694:215989..216086Clytia hemisphaericaexon
TCONS_00018851-exon-sc0000309-1575043694:215299..215455TCONS_00018851-exon-sc0000309-1575043694:215299..215455Clytia hemisphaericaexon
TCONS_00018851-exon-sc0000309-1575043694:214816..214833TCONS_00018851-exon-sc0000309-1575043694:214816..214833Clytia hemisphaericaexon
TCONS_00018851-exon-sc0000309-1575043694:212863..213136TCONS_00018851-exon-sc0000309-1575043694:212863..213136Clytia hemisphaericaexon
TCONS_00018851-exon-sc0000309-1510915933:222327..222430TCONS_00018851-exon-sc0000309-1510915933:222327..222430Clytia hemisphaericaexon
TCONS_00018851-exon-sc0000309-1510915933:221044..221159TCONS_00018851-exon-sc0000309-1510915933:221044..221159Clytia hemisphaericaexon
TCONS_00018851-exon-sc0000309-1510915933:220240..220349TCONS_00018851-exon-sc0000309-1510915933:220240..220349Clytia hemisphaericaexon
TCONS_00018851-exon-sc0000309-1510915933:216604..216646TCONS_00018851-exon-sc0000309-1510915933:216604..216646Clytia hemisphaericaexon
TCONS_00018851-exon-sc0000309-1510915933:215989..216086TCONS_00018851-exon-sc0000309-1510915933:215989..216086Clytia hemisphaericaexon
TCONS_00018851-exon-sc0000309-1510915933:215299..215455TCONS_00018851-exon-sc0000309-1510915933:215299..215455Clytia hemisphaericaexon
TCONS_00018851-exon-sc0000309-1510915933:214816..214833TCONS_00018851-exon-sc0000309-1510915933:214816..214833Clytia hemisphaericaexon
TCONS_00018851-exon-sc0000309-1510915933:212863..213136TCONS_00018851-exon-sc0000309-1510915933:212863..213136Clytia hemisphaericaexon
TCONS_00018851-exon-sc0000309-1491911889:222327..222430TCONS_00018851-exon-sc0000309-1491911889:222327..222430Clytia hemisphaericaexon
TCONS_00018851-exon-sc0000309-1491911889:221044..221159TCONS_00018851-exon-sc0000309-1491911889:221044..221159Clytia hemisphaericaexon
TCONS_00018851-exon-sc0000309-1491911889:220240..220349TCONS_00018851-exon-sc0000309-1491911889:220240..220349Clytia hemisphaericaexon
TCONS_00018851-exon-sc0000309-1491911889:216604..216646TCONS_00018851-exon-sc0000309-1491911889:216604..216646Clytia hemisphaericaexon
TCONS_00018851-exon-sc0000309-1491911889:215989..216086TCONS_00018851-exon-sc0000309-1491911889:215989..216086Clytia hemisphaericaexon
TCONS_00018851-exon-sc0000309-1491911889:215299..215455TCONS_00018851-exon-sc0000309-1491911889:215299..215455Clytia hemisphaericaexon
TCONS_00018851-exon-sc0000309-1491911889:214816..214833TCONS_00018851-exon-sc0000309-1491911889:214816..214833Clytia hemisphaericaexon
TCONS_00018851-exon-sc0000309-1491911889:212863..213136TCONS_00018851-exon-sc0000309-1491911889:212863..213136Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000309supercontigsc0000309:212863..222430 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.37847	0.411255	0.884369	0	0.365559	1.60317	1.49146	1.93821	1.33589	0.823598	1.65891	2.66499	1.55566	1.10925	1.85604	0	2.23017	0.382403	1.8647	1.54696	1.44837	0.872113	0.571797	3.40728	0.401286	0.508521	0.760895	1.07441	1.10652	1.70902
Blast
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BLAST of TCONS_00018851 vs. Swiss-Prot (Human)
Match: MED8 (Mediator of RNA polymerase II transcription subunit 8 OS=Homo sapiens GN=MED8 PE=1 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 1.086e-29
Identity = 64/171 (37.43%), Postives = 101/171 (59.06%), Query Frame = 1 
Query:  151 VASVISRCPSKISCLNW-----NMKLSLGQISTLNKLLKNDRMPVLRNLCILPLMVSQERDTEMEEMTENRIPVVTHEVVPDALRTKYEPDVEKVEEELTLQSNSISVDMARSQVVALNDLIGSMLDLIQNSRDWETESSVEQADLAPSAN-----DTNILLAAITQGSGL 633
            + S I +  ++   L W     +  L  GQ++TLNK+LK+++ P+ RN  I+PL++S +RD ++   TE R+PV +HEVVPD LRTK +P+VE+ E++LT  +  I  D A+ Q+ +LN +  ++L+ I      + E   E   L P+       DTN L+AA+  G GL
Sbjct:   26 LGSFICKLENEYGRLTWPSVLDSFALLSGQLNTLNKVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQEKQLTTDAARIGADAAQKQIQSLNKMCSNLLEKIS-----KEERESESGGLRPNKQTFNPTDTNALVAAVAFGKGL 191
The following BLAST results are available for this feature:
BLAST of TCONS_00018851 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MED81.086e-2937.43Mediator of RNA polymerase II transcription subuni... [more]
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