TCONS_00018850 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018850
Unique NameTCONS_00018850
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length950

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018850 ID=TCONS_00018850|Name=TCONS_00018850|organism=Clytia hemisphaerica|type=transcript|length=950bp
tttgatttttatattttaaaggAAGGACACTTGGAGATCCATAACATATA
ATAAAAACCATTAAAGAAAagccattttaccaaaaaaaatatGCAGCAGG
AAAAAGAAGAGAATGTCATTGCAACGTCACtgcaaaatttgattggtcgc
gTCAGTGATATCAAGATGTCcatccaaaatttcatgtttaaatTGGAACA
TGAAACTCTCTCTTGGCCTCAGATGTTGGACAATTTCGCCTTGTTATCGG
GTCAAATCAGCACATTGAACAAACTTCTGAAGAACGATCGAATGCCAGTG
TTGAGGAATCTTTGCATTTTGCCACTGATGGTCAGTCAAGAACGTGACAC
TGAGATGGAGgAAATGACAGAAAATCGCATACCAGTTGTGACTCATGAAG
TGGTACCGGATGCATTGCGAACGAAATACGAACCGGACGTCGAGAAAGTA
GAGGAAGAACTCACTTTACAATCCAACTCCATCTCTGTTGATATGGCTAG
GTCTCAAGTAGTAGCGTTGAACGATCTGATTGGCTCCATGTTGGATTTGA
TACAAAACAGTCGCGATTGGGAAACGGAAAGTTCGGTGGAGCAAGCAGAC
TTAGCGCCGTCAGCAAACGATACCAACATCCTCTTGGCTGCCATCACGCA
AGGCTCTGGATTACGAAAGTCGTCGAGTTCACGAAGTTCCTCACAGCGAA
GTTCATCGCAACAGCGAAGCAGTTCGCACCACCATTAGAATTTTAATGTA
AAAtagctttttcatttttattgtagtataatattttttaaattgtcaat
atatacaaaatttaacgaataaaatcaaattgtaaaatttatttcatcTG
AATTATCAGCCTTTCCAAGAAACCGAAAACTTTTCGGGTTGATGGAGAAA
AACTTGTTAGGGTCGTAAAATGATTCTTCGTACGTGTTTAGCTTCCATGT
Run BLAST on NCBI

transcript from alignment at sc0000309:212863..221582-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018850 ID=TCONS_00018850|Name=TCONS_00018850|organism=Clytia hemisphaerica|type=transcript|length=8720bp|location=Sequence derived from alignment at sc0000309:212863..221582- (Clytia hemisphaerica)
TTTGATTTTTATATTTTAAAGGAAGGACACTTGGAGATCCATAACATATA
ATAAAAACCATTAAAGAAAAGCCATTTTACCAAAAAAAATATGCAGCAGG
TGTGTACAATTTTCCAAAAAAATCTGTTTTATAAGTAGTTACAAATTATT
TTTGAAACAGTTCTAAATGATAATAAAAGGTATATCAGTGTTGCAAATTT
TTGGAATGTACAGGTATGTAGACGGAAAATCTGGCCATTGAGATAAACAA
GAATGATTTTGATCAAATAACTCCTCACTAAACCAAACGATTCAGAAAAT
CTAGTCGGTGCTTTGGATCCCTACTTTGCAGGCGTTTTTAATTTGTAAAG
CGTGTGTCATTTAGTTCATTTTCTTTAAAAACATTTCTTAAAGAGTACAA
TCTATACGTCACTGTTATTTTAGGAAAAAGAAGAGAATGTCATTGCAACG
TCACTGCAAAATTTGATTGGTCGCGTCAGTGATATCAAGATGTCCATCCA
AAATTTCATGTTTAAATTGGAACATGAAACTCTCTCTTGGTAAGGGTCTT
TTTTCATTACAATAAATTTCTTCTTTTTTGCTCATTGTGACTACCATGCT
AAGCGTGCTTAACGAAATAGAATAACAGTTGAATTGACTTTACTATTTTT
TTATCATTAAAATTCTGTAGGCCTCAGATGTTGGACAATTTCGCCTTGTT
ATCGGGTATTTTACTACAATTACTTTATTAAAATTTATATTATACAATTT
TTTGAGTGGGATCACAATTTAACAAAACATTAATTTTGCTTTATTGCGAT
CATTGCTTTCACAAAATAAGAGTTATATGTAATCAATACACCTTAAAGGA
AGAAATTTTGGTGGGAATTTAATTTGGTGGTTGCAGGATTTGTTTTGGCC
AAAATCGTTATCAAATAAGCAAAAAAACCTGTTTTAAGGCCTGAAATGGC
ACCAATTTGGGGAATGCGTTTTAAATAAAATAAATTTGGCAGGAATTTAG
TTTGGCGGATGGAGGAAAGAATAAACTTTGGCGGGAACTTAAATTGGCTA
AATCAGCCAAATCAGCCAAGTTTTCTTTCCGCCAAAATTTCTTCCTTTAA
GGTATATAGTTTTTTGTCAGCAACATTTTCGATCTAATTAGAATCCATGT
AGGTGTGGTGTAATCATCTTTAAATTTATTTTACGGCAGTCAAATTTGAA
GCGATTCTTTACAGTTATTATTTTTATCGGTAGGTCAAATCAGCACATTG
AACAAACTTCTGAAGAACGATCGAATGCCAGTGTTGAGGAATCTTTGCAT
TTTGCCACTGATGGTCAGTCAAGAACGTGACACTGAGATGGAGGTAAGTT
TATCTTTACTTCAAAAGTATTTTAAGACCTGCAGAGATCCCACTCGGCAT
GTTTTTCATGATTTTCATGATTTTTGCAAATTTGGCATTTTTCATGGTTT
TTAGCATGTTTTGGATCATTTTGGCATGTTTTTCAGAGAATCATTAGGGA
ATTTTGTTTATATTGTCTCTTCTCTGTCCTGATATTCAGATTCATTAAAG
ATAGCTCAAAATAGCACTTTCAGCCCCCAAAAATTCTAAAATTTTCTGAC
TTGCCCAACCATGGTGGGCAACGTTAAATATTATCTTAAGTTTTCAATAA
ATACCATTGACAGAAATGTTAAAACAAGGATGTGTCAGGCAGGGGATCCA
TCTTTTCCAATGCTTCATAGGGAGGTGGGAGATTTCCCGAAAAAAATGAG
GGGGTTTAAGATTTTAGAGGGGGGGTCAAGTAAAAATAGGGGGGATAACA
ACTTTTGGTCAAAATATCTATCATATTTATATTGATTTAGTTATTTGGTA
TGGGACAACTAAAAAACAAGTGTAGATAGCTAAATCTTTGCCTGCGGCAC
CATGTTAAACTCTTTTTTTTCATATAATTTTTTATACAAATTTCAATGTT
TTCGGTTTTGAATGACTGGTGGACTGCTGCTGTCAATAGCACGGGCTCGA
ATTTTTTTTTTAATAGGGGGATACACATATAGGGGGATGAAATAAAAATA
GGGGGTTTAGATTACTCTGCACACTATGTTTTTCTCCGTTCAAGCTCTAC
TTTATAAAACAAGTAGCCAATATTTGGAAGTTTTGTCAAGACTACATGTC
ACTGAACCACCTCATTATTCTTCCAGGGTTTAGACAGGTCCATGACCTCG
GCAAAACACAGGGTTTTTTTAAAGAACCAATTTTTAAAATGTCTCTTGCA
TTATAGCTTGTATTCTAGTGTCTGGATATACATGATTTTTAAATATTTCT
CCTTTGGGGCCAACTTTGGTTTTTTCAGGAACAGGGCTCCCTAAGCTAAA
ATTTGCCTTATGTACATTTTTCTGATTCTTACTTATATTGTTCCTACATT
TCAATCAGTTATTGGACCTACCTTATTGGAGGTTCTATAAATTAACCCAT
GTCCGTTCGTTCGTTCGTCTGTCCGTCCGTCTGTTACCAGCTTTTCTCAG
AATTGGCTCATTAGTTTTTTCTGACTTTTTGCACAATGATGCAAAATGGC
AATGCCCAGAACGTGACGGAGCCCGATTTTTGAGAACAAATTTATTTGGG
CAAATTTGGGCCAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATAG
GGTTTTTTAGACTTTGTGCAAAATCCTGTCATTACTTTTTTCTGATTTTT
TGTACAAAGATGGAGGGCAAGATTCTCTAAAGAATGGCTGAGGTGATTTT
TCCTGGAAAATTCTTATTCGCCTTAAAAAACGGATTTTTGTATTTTGGGG
AAATTCCCTATAACCAAATAAGAAAATATACCTTTTCTCAACGTTGACTC
GTTATTTTTTTCTGATTTTTTTGCACAATGATGCAAAATGGCAATGCCTA
AAATGTGTCAGAGCCCGATTTTCGAAAAAAAAATATATTTGGGCAAATTT
GGGCCAAAAACTGCCTAAAAATAGGGTTTTTTGGACTTTGTGCAAAATCC
TGTCATTACTATTTTCTGATTTTTTGTACAAAGATGGAGGGCAAGATTCT
CTAAAGAATGGCTGAAGTGGTTTTTCCTGGAAAATTCTTATTCGCCTTAA
AAAACGGATTTTCGTATTTTGGGGAAATTCCTTTTAACCAAATAAGAAAA
TATAGCTTTTCTCAAAGTTGACTCATTATTTTTTTCTGATTTTTTGCACA
ATGATGCAAAATGGCAATGCCCAAAATGTGACGGAGCCAGATTTTTACGG
AAAATTATTTTGAGCAAATTTGGGCCAAAAACAGCTTAAAAGGTTTTTTG
GGCCTGAATGGTTTAAATGATTTTCGTATTTGGGGAAATTCCTTTTTACC
ATTTTACATTATTCAACACACAAGCTTTATTTTTCCATTCTGAATTTTTG
TACAATTATTGTCACTTTTTTCTTATTTTCATCTGATGTTAATCATTAGG
TACAGGTCCATTCAGCATGTTGCTTGTTTTCTATTTAGTTTTCCACCCTT
GAAAAGAGACTTTTTTTGCATCTTGAAAATCAGAAACTTTTCCTATTGTC
CAACCATGGTGGGCTACATTTTGAATTGCAGCCTTTGATTGATTAATAAA
TTCCAAGTGAAATGATTTCTACTTATGTTTGTGTTATTTATTAGATTATA
TATCGATTTCTCATCATGTCTACATCAATGGTTTTAGGTACGGGAAACAC
GGGGACTTCGTTGATTAATAACTCTACTTTTTAGCATGTTTTTCATGTTT
TCCATTTAAAATTAGCATTATTTAGCATTTTTTTCTGCTCTTTTTGGCAT
TTTTTTATGCATGTTTTTTCAAAAATGCCAGTGGGATCTCTGGACCTGTT
GTATATTTTTGAAAAGCTCTCAAAAAATTAAGATTAGTGATATATTGCGA
GTATAGGTGATTTCTTTACCTAACTCGAGATATTAATCCTTTAAAAACAG
TACATTTTTCTGTGTTTTTCAGCCAGAAACAGCTGTTTTGTCCAGTTTTT
GCGCTTTCGGAAGCTCAATATCTCGAGTTAGGTACTGAAATCGCCTATAC
TCGCAATATATCATTAATCTTGATTTTTTGAGAGCTTTCCAAAAATATAC
AACAGGTCTCCGTTTTCTCAAGCTAAAATTTTCATTAATTTTTCACCCTA
TGATTTTTGCCTGAGACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCAAAGTGTCCGAAAAAAAA
TTGGCACCCAAGTTATTTTGATTCCCCTACCCCTTAGCTTTCCAAAAATG
TATAACAAGTGCTTTGACTAAGAAATTCGAGCGATTTTACAAATTTTACC
CTACTACTTCCACTTTCTTTCATTGAATATTTCGATTTTGGAGGGGTTCG
TTGGTTTCTAGGCTATATTGCAAGCCTTATTGGAGCAAATTTTAGGTTTA
AAATCCTGACAGATCCTGAGATCTTAATGGCCTAAGTCTTTAAGTCTCAT
GTTAAAACTCAGAGTTAAAACTCTATTTTCCAACTGTAGTTTTAACGCGC
TTAAAATCATTTGTAGTGTTTAAAATTTCGCAGGGAAATCCCCTTTGGTT
CAAATATCTTGTCCATGATTGTAACACGAACAAATAATACAACACTAAAA
AATATTTGTCCTCATGGAACCAAAATGTTTTGTTGCCTTGCATTTACTGA
ACGAATGATGAAAGTATATGTTTTTTTTTCTCTCAGGAAATGACAGAAAA
TCGCATACCAGTTGTGACTCATGAAGTGGGTAAGTCCCGGGGGGGAGGGG
GCACTCGATTTTGAAAACGACCGTACGTTCGGCAAAAATCAGGTCTCCAA
AATCGGACCCTTACAGTGCAGGAAAAATTTGGCTGAAAATCGACCCTTAC
AGTGCAATTTTTCAAAAAAATTGGAAATTTCTCAAATTTTACCTCAAAAT
TTGGTATTTTCTCAAATTTTACATCCTTACAGTGCACTTTTTCCCACTTG
CTCACAAATCAACCCTTACAGTGCACTTTCCAAAGTCCAAAAACCTACCC
TTAAGGGCCGCAGGTCCGGTAGATCACTTACCTGGAGTGCCCTCCCCCCC
CCCTGGGGTAAGTTTGATCTTGAGGTTTAACTTTTTAATATGACAAAATT
TCTAGTGCGGGGCTTTTCAGATTTTAATAAAGAAAGTTCTTTGAGTCATA
TTTGAACAGACGTTCTTAAAAATTGAGGGCGCCCGGGATCAAAGGGGAGA
GTCTCCGTTAAAATGGATTAGAAACGAACGTAATTTTCCGTTTTAGTACC
GGATGCATTGCGAACGAAATACGAACCGGACGTCGAGAAAGTAGAGGAAG
AACTCACTTTACAATCCAACTCCATCTCTGTTGATATGGCTAGGGTAAGA
ATTCACAAACAACGTTTATGATGGATGGGAAAGTGCTATTTTCAATGTTT
TGAAAAAAGTATTTTAATTGGATTAATTTTCGCGCGGACTTTTCTTTTGC
AAATTGAGAATCTAAAAATTTCGCGCGGATTACGCGAATCAGCTTTTTTT
TCACCTACTGTAATTACTTTCATTTTCCTAGGGTTTTTGGCTGAAATTCG
GATTTTTAATTTTTAGTGAGGACTAAATTTCGCGAAAAGGGCCCAAATTC
GCGAAAATTGCGAAAATTAATCCACGTGAAATTTAATTATCACAAAAATA
GCCTTTTTTTCCTCATTTTTCACGCACCAGATTCAGGGTCGTGATCGTGA
TCGTTTTTGCAATTATTTCAAAGGGATCAAGACAGGTCGTGACTGAATCT
CGAAAATAAGTTTCTGATTTTTTTTTTTTTACCTTTTTATTTTCTTTATT
TGCTAAATTCGTAGATTTCTTTCTTTTCCTTACATAATAAGTTACTTATC
TATACTCGTTTTCCCTTACCATTTCAGTCTCAAGTAGTAGCGTTGAACGA
TCTGATTGGCTCCATGTTGGATTTGATACAAAACAGTCGCGATTGGGAAA
CGGAAAGTTCGGTGGAGCAAGCAGACTTAGCGCCGTCAGCAAACGATACC
AACATCCTCTTGGCTGCCATCACGCAAGGCTCTGGTAAGTTCTACACCTA
TCATCCAAAGAAGTATAAGCCCGAAGGGCTAGAATCGAATCTTTAAAATT
TCTCAGGCAAGAAAAATTGAAGCCTTAAAATATGCGCCGTGTTTTTGACG
ACGGATTGAATCTAGCGATTCCTTTGCTTTAGAGTCATATCTTTTTCGAA
ATTTAGATCTAAATTTTAGTTTTAGTCTGTCATTTGTGTAAAAACTCAGC
GGACCGCGCTAGGCCGCGCAACTTTGGTAGGATTTGGCAGGCTTCAAATC
CTACCAAGGAGATTCGATTCTAGCCCTTTGGACTTATACTTCATATTGCT
GTCTTCTCTTACAGCTCGTATTCTTTGTTGAAAATAGGGTTTTTTCATCA
CCAGCTTCTTTCAAAGTTCTTAGAATTAGAGTAATAGTACTGAGAAAGTG
TAAAATTTGAATACTGTAGATTAATGAATAAATTTTCTTATCTTTTTAGG
ATTACGAAAGTCGTCGAGTAAGTTTTATCCATTTTCACTCATTAATTTGA
TGCAAAAGTTAATTTCTTTAAATTTCTTGACAAGGCAATTAGCGGAGTTC
TCTCAAAAAACTCTTTAACGAAGGTTAATTTTCGCAAAGATTACAATTTC
CTCAAGTTAGCGAGAGTAAAGGTTGTATTTTTCGCGATTTTTCGACCTCG
TGAAAATTTCTGCTCACAAAAGTTTGTCTAAATTATATTCCGGTACTTTT
AAAAAACCGATGCATCATACTGTCCCTTTATAATATTCGACAAGTAAAAG
TAGAGCATTTTATATTCATAACATTCTGACTGATATAGAAATGACGAAAT
TTTTCAGCATGTTTTACCTACACACGACCAGATCCTGCAAACCGCTCCCT
TTGAAGTTAAGCCGAAGACATCCTTGTGTTGTTTTGTTGTTTTTTCGAAT
TGTACATACTTGTGTTATTTATTGCGTGAAAATCCAGACATATTTTATAT
TACGTTTCAAAGTGCGAGTCTATTCCCTTTTTTTTGACTTCTTAGTAATT
ACTCTTGTCTCCCGAATAGACGGGGGGAGGGGGTAGGAAAATTTTTTAAA
GCAGGGGGGGGGTAGAATAAGAGAGGGTTAATTTGAAGACAGAATTTTTT
TAACTGGTATCAATTTCAACAGCAAAAAAGAAACTTTAACAAATGAACAC
GTAAAATAAGAACCAATACTAACAAAAAGGAAAATTTTAGCCTGTGTAAG
GTCTATCTACACTGTAATGAAATATTGAATTAATCGAATTTAATTAGCGG
GGGTGGATGTTATTTCTCTTATAACATTTAGTGGGGGGCGTTTATTCGGG
AGATAAGAGCATGCACTTCCTGAAAATTAAATACCCTAGTAAATTTTGAG
TTGATCAAGTTGAATGAATTTGGTGAAAGAGAGGCTGATTCGCAAAGTCT
TGTCCTTAGATTTTAAATTCAAACTTACTTCAAGCATAAGTACGTGGTCG
AAAAATCGAGACATTAATGATATATCTATTGCCTTTCGCGACACTGTAAC
TTTATTGGCTAAATTGCTTGCATTCTTTCTTCCTGTAACCTTAAGTTTTA
TAGGTTTTCTACATTCGAAAGCATAAAATTTTTTCGAAAAGGCCAAAAGA
TTGAACGAACAAAAATTGGTTCTCGAACTCTCATGCAAGGATACTGATAG
TATTTGCGATGAAAACAATTTAGCAAGCGGGAAGATTTCTTTTAATNAAA
CTCTCATACAAGGATACTGATAGTATTTGCGATGAAAACAATTTAGCAAG
CGGGAAGATTTCTTTTAATAGGTCAGGTGGCTTGTAGAGCGCATATCTTT
AATCATAGAAATTTTAGCGAGACTAATTTTAGCGAGTTTTCCCTATCTTC
GCTAAAATAAATCTCGCTAAAACACGCCGAATCGCCAGATCGCTAAAATT
TATCCGCGCGAAATTTCTGGTTGTATTGCCTTGATACATTTTTATCAATA
GAAAGGGTTTCAGTGCAAAGAAATGCTAGAAAACGAATTCAATCAATAAT
GTGATACGAGTGTTCGCTAAAATTAATAAATAAATCCAAAAAAATCAAGA
TTTTCCTGACTCGCTAATATACGCTAAAATTAGTCTCGCTAAAATTTCTA
CGATTATAGTATCTTATGAAATATTTTTTGGGTCGGTTATTTCCAGGTTC
ACGAAGTTCCTCACAGCGAAGTTCATCGCAACAGCGAAGCAGTTCGCACC
ACCATTAGAATTTTAATGTAAAATAGCTTTTTCATTTTTATTGTAGTATA
ATATTTTTTAAATTGTCAATATATACAAAATTTAACGAATAAAATCAAAT
TGTAAAATTTATTTCATCTGAATTATCAGCCTTTCCAAGAAACCGAAAAC
TTTTCGGGTTGATGGAGAAAAACTTGTTAGGGTCGTAAAATGATTCTTCG
TACGTGTTTAGCTTCCATGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010554XLOC_010554Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018850-exon-sc0000309-1575043694:221484..221582TCONS_00018850-exon-sc0000309-1575043694:221484..221582Clytia hemisphaericaexon
TCONS_00018850-exon-sc0000309-1575043694:221044..221159TCONS_00018850-exon-sc0000309-1575043694:221044..221159Clytia hemisphaericaexon
TCONS_00018850-exon-sc0000309-1575043694:220878..220912TCONS_00018850-exon-sc0000309-1575043694:220878..220912Clytia hemisphaericaexon
TCONS_00018850-exon-sc0000309-1575043694:220240..220349TCONS_00018850-exon-sc0000309-1575043694:220240..220349Clytia hemisphaericaexon
TCONS_00018850-exon-sc0000309-1575043694:216604..216646TCONS_00018850-exon-sc0000309-1575043694:216604..216646Clytia hemisphaericaexon
TCONS_00018850-exon-sc0000309-1575043694:215989..216086TCONS_00018850-exon-sc0000309-1575043694:215989..216086Clytia hemisphaericaexon
TCONS_00018850-exon-sc0000309-1575043694:215299..215455TCONS_00018850-exon-sc0000309-1575043694:215299..215455Clytia hemisphaericaexon
TCONS_00018850-exon-sc0000309-1575043694:214816..214833TCONS_00018850-exon-sc0000309-1575043694:214816..214833Clytia hemisphaericaexon
TCONS_00018850-exon-sc0000309-1575043694:212863..213136TCONS_00018850-exon-sc0000309-1575043694:212863..213136Clytia hemisphaericaexon
TCONS_00018850-exon-sc0000309-1510915933:221484..221582TCONS_00018850-exon-sc0000309-1510915933:221484..221582Clytia hemisphaericaexon
TCONS_00018850-exon-sc0000309-1510915933:221044..221159TCONS_00018850-exon-sc0000309-1510915933:221044..221159Clytia hemisphaericaexon
TCONS_00018850-exon-sc0000309-1510915933:220878..220912TCONS_00018850-exon-sc0000309-1510915933:220878..220912Clytia hemisphaericaexon
TCONS_00018850-exon-sc0000309-1510915933:220240..220349TCONS_00018850-exon-sc0000309-1510915933:220240..220349Clytia hemisphaericaexon
TCONS_00018850-exon-sc0000309-1510915933:216604..216646TCONS_00018850-exon-sc0000309-1510915933:216604..216646Clytia hemisphaericaexon
TCONS_00018850-exon-sc0000309-1510915933:215989..216086TCONS_00018850-exon-sc0000309-1510915933:215989..216086Clytia hemisphaericaexon
TCONS_00018850-exon-sc0000309-1510915933:215299..215455TCONS_00018850-exon-sc0000309-1510915933:215299..215455Clytia hemisphaericaexon
TCONS_00018850-exon-sc0000309-1510915933:214816..214833TCONS_00018850-exon-sc0000309-1510915933:214816..214833Clytia hemisphaericaexon
TCONS_00018850-exon-sc0000309-1510915933:212863..213136TCONS_00018850-exon-sc0000309-1510915933:212863..213136Clytia hemisphaericaexon
TCONS_00018850-exon-sc0000309-1491911889:221484..221582TCONS_00018850-exon-sc0000309-1491911889:221484..221582Clytia hemisphaericaexon
TCONS_00018850-exon-sc0000309-1491911889:221044..221159TCONS_00018850-exon-sc0000309-1491911889:221044..221159Clytia hemisphaericaexon
TCONS_00018850-exon-sc0000309-1491911889:220878..220912TCONS_00018850-exon-sc0000309-1491911889:220878..220912Clytia hemisphaericaexon
TCONS_00018850-exon-sc0000309-1491911889:220240..220349TCONS_00018850-exon-sc0000309-1491911889:220240..220349Clytia hemisphaericaexon
TCONS_00018850-exon-sc0000309-1491911889:216604..216646TCONS_00018850-exon-sc0000309-1491911889:216604..216646Clytia hemisphaericaexon
TCONS_00018850-exon-sc0000309-1491911889:215989..216086TCONS_00018850-exon-sc0000309-1491911889:215989..216086Clytia hemisphaericaexon
TCONS_00018850-exon-sc0000309-1491911889:215299..215455TCONS_00018850-exon-sc0000309-1491911889:215299..215455Clytia hemisphaericaexon
TCONS_00018850-exon-sc0000309-1491911889:214816..214833TCONS_00018850-exon-sc0000309-1491911889:214816..214833Clytia hemisphaericaexon
TCONS_00018850-exon-sc0000309-1491911889:212863..213136TCONS_00018850-exon-sc0000309-1491911889:212863..213136Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000309supercontigsc0000309:212863..221582 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
22.4831	25.442	24.7718	27.5734	15.298	11.5779	11.8754	8.98165	12.9037	12.9128	6.90306	7.4976	5.82454	6.08948	6.98421	7.16514	12.8995	13.129	4.30765	4.24374	7.05774	6.69626	11.72	11.7603	7.85159	8.77471	3.11622	2.71356	4.31314	4.50151
Blast
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BLAST of TCONS_00018850 vs. Swiss-Prot (Human)
Match: MED8 (Mediator of RNA polymerase II transcription subunit 8 OS=Homo sapiens GN=MED8 PE=1 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 4.549e-45
Identity = 83/195 (42.56%), Postives = 129/195 (66.15%), Query Frame = 1 
Query:  100 EKEENVIATSLQNLIGRVSDIKMSIQNFMFKLEHET--LSWPQMLDNFALLSGQISTLNKLLKNDRMPVLRNLCILPLMVSQERDTEMEEMTENRIPVVTHEVVPDALRTKYEPDVEKVEEELTLQSNSISVDMARSQVVALNDLIGSMLDLIQNSRDWETESSVEQADLAP-----SANDTNILLAAITQGSGL 663
            ++EE  +  SL  L+ +V+D+K S+ +F+ KLE+E   L+WP +LD+FALLSGQ++TLNK+LK+++ P+ RN  I+PL++S +RD ++   TE R+PV +HEVVPD LRTK +P+VE+ E++LT  +  I  D A+ Q+ +LN +  ++L+ I      + E   E   L P     +  DTN L+AA+  G GL
Sbjct:    2 QREEKQLEASLDALLSQVADLKNSLGSFICKLENEYGRLTWPSVLDSFALLSGQLNTLNKVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQEKQLTTDAARIGADAAQKQIQSLNKMCSNLLEKIS-----KEERESESGGLRPNKQTFNPTDTNALVAAVAFGKGL 191
The following BLAST results are available for this feature:
BLAST of TCONS_00018850 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MED84.549e-4542.56Mediator of RNA polymerase II transcription subuni... [more]
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