TCONS_00018819 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018819
Unique NameTCONS_00018819
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4056

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018819 ID=TCONS_00018819|Name=TCONS_00018819|organism=Clytia hemisphaerica|type=transcript|length=4056bp
ATGTTTATAGCGGATGAACCCGACTAGAGAGAAGGTCAGGAAGCGAGAAC
ATCAGAGAAGGTCAAGAAACGAGAACATCAGAAGACTCCTAGAAGTGCCA
AGAATTTTACTTTGAGCTGATGTGGTTGGCAAGATGAGTTCACTCGTCAT
CCTTTCATCAgatgaaaatgaaatcaaagacATCAACGAAAAGTTATCAG
AAGATGGTTTTCATGATGACCTTTCTGAAGAACACAAATTACGTTACATT
TGGAGGCTGTACAGAAGATCAGAGTGTAGTTTATCATCTTCTGTCGAGGA
CATCAACAAATTACGCAAACAGCAAGCTGATGATATGGTTCAGGTTGAAG
AATATATTTCCCACATCCAGCAATTATCTGACgaacaaaagaaatttctg
ACGGATTATGAGAAAGAGAATGACCACCTAAAACATGAAGCAGAATCTAT
CAAAAAGGTCCTTGAAGAATCTCTTGATCTCTTTGATGAGGAGAATCGTG
AAAATTCAACATTGGAGAAAATTGAAAACCTTGTCAATAAACACAAAGTT
CTGAATGAGAGCTTCGACCAGTTACGAATCGAGAAAGAAATTCTATCAGA
GACACTTTCTGAACATTCTTCTTctttcaaagaagaaatcaagtTAGTTG
ATTATCTTAATAAAGATACAGGAAGTTTTGATGATTTGAGTGACATGTTG
AAAACTACTGAACCcctcgaaaaaatgaaaatcctgatgAACATtgcaca
aaaacaaaatcaagatttAAAAAGCATGAACCACGATCGGAGGAAGCTTC
AAGAGTATTTGTTGTTACATGATGAACATTTTTATATGGAGCAAATTATC
GAAAATCTCAAAGCGAAAGATGAAAAACATCAATCTCTACAGGATGATCT
GTTCgctttgaaaaaaactttaatcgATCCCCACCACAAGTCTTTGAACT
TTTCCCTCCATGTTGATTCTGATGATGATGACGGTGATGTAGAAGATTCT
GAAATCGAGGAAGAATTCAGCACTCAAcatttcattgaaatcactcaaCG
TTTTCAAATTATGAAACAAGAAATCAACGACCTGAACCAGCAAGTCACTT
CCATCAATTCTGTAATAGATTCTGATGATCTTGATTTTCACCAAGGTGCC
ACTATCGAAGAAAAGATTTTGTTAGTGAAAAAATCGTTGGGCGAGCAATC
AGATGTGATTCAGGAAAAAGATGAATCCATGTCTAAACTTGCTGTTATTC
TAAACTGCAAGCCCTCTGAAGAAGTGCTGGTTACTTCAATttccaaaatg
aaaaacactttcGAATTACAAGAGATAGAAATAAATAACATCAAACTAAT
ATTTGACATCAAAAACATAGATGATGATCTAGTATCGGCTGTGGTAAGTT
GTGTTGAGGTAATGACAGAGAAAATTGAATCCTTGGAAAGAGACCTGAAC
GCTGTTAAAGAGATGGTTGGTTGTTCATCAAATGTGAATGTTATTAAATC
TCTAAAATTGTTGATAGATGGAAGAACGAATCTGAAGCAATTGGTAGAGG
ACTTTGCGGAGCTAACTGACACCAAATATTTGCAGGGTGAAGAGAGAACC
GAAATTGTTTTAGATTCTTTGAATGATATCAAGACCAGATTGAAATATTA
TATGTCAGAGGAGGAAGAAATAAGAGAATTTGTTCATGCAAACTGTGAGA
AAGCTACAGATGATGAAATGTCTTTGCGTGTTTTATTTGACGAGTTTACC
AAGTTAAAGAAATNCAGACGATGAAATGTCTTTGCGTGTTTTATTTGACG
AGTTTACCAAGTTAAAGAAATCTGAAGAATTGTTGAAGAGGGAATACATA
TCGCTGGAAGAACGGATAAAAGAATTTTGCGTCGGACTTGTTGGACGTGA
GCAAGCTACAGAAGACCACGATATTTGTCgcattttgcaaaaatatgagG
AAAATAAGAAAAGTGAAATGTTGGAATTGGTGAATTTGATACACGATTCG
GGGTTGGTGGACATTGAAACAAATTATGAAGACATCAAAGAAAACCTGAC
ATTGCTCATACAGTGTTGCAAAGATTCAATTTCTAACAAGAATGAAGAAA
TCTCAAGTGCAAAACAACTATTGTGCAATAACTTGCAATACAGTGAACTT
CTAAAAGATGAGAAACTGGAAGATTCGATACGAGTTTTGATCGATGGTAA
GAATCAGGCTCAAACTGTGATTGATGACTTTTTAAGAGAAAACGGATTCG
AAAACGAAAGTCAAATACTTCCCTTCGAacgaaaaattacatttttctca
GATAAAGTAAGAGAAATGAAAAGTGATTTGAGCAAAGCAgaatctgaaaa
attgaaattcgaaGAAACAGAAACTCTATTAAAAGCCAAAATTGATGCTA
TAAAACTCCCTGGTCCATCCCTAAATGAAGACATTTTGTCCAAAATCGAA
CACGTTCAGGAGCACGTGGTGAATTTAGAATCGGCTGTGGATGATCATCA
GTCATTTGTGAAGGAGATCGAAAGTTTGTCTTTCAATTTGATTGGTGATG
GGAATGACAATATTGATGACATTAACAACAACATTGATACTCATCAGAGA
CTCCGATCTTTTTCTAAACGATACCAAAAATTGTGCGAGGAGGCATCAAT
TCTACACAAAATAGAACAGAGAATGGAGGCTTCATCAGCTATCGTCGATA
CTTCTAAAAGTACACTCGAAAATTTTGATCGTCTTGCAGAAGAACATGTA
CGCATGCACCAAACCCTGACTGGAAAAAATGAACAATTAATTTCTCTGGA
AAATGTGATAAAAGACTGCCATAAGGACTTGCAAGAGGTAGAAGATCAAA
CCACGTTTGGAATATATGCCTCCGGTGGAGATGATGCGAGCTTTGATGAA
ATAACTAACCAATTCAAAAAGAACCTTTGCAAGTTATGCAATGATTTACG
GACGATAAAGCAATGCTTGTGTGACGGAGACTCGTCACAGCTTCCAACAA
TACAACAATGTGTACAAATAGCTCAGCGAATCGCTCAGGAGAAGCAACAA
GTTTCAAGGACAATAGAAAACTTACAGTCTGCAACAACAACTATTAACGA
GGAGCCAGCTTTAACTGACATTGGTAGTTTTGAGGATCTTTCTAATGCTT
TCTTGGTTTTACTTAAAGTCTACGCTGAAATTAAATCACGTTTAGAAACT
CTTCAGAATGAACACGGAGATTTGGAAACGCAAAACACCTCTATGAAGCA
AAGCTTAGAACAACAGAATGGGGAAATTGAAACCTTGTTGTCAAATATTG
AACGCTTAGAGATGAGTAAGCAGGAAAACGACCTTGAGATTCAGAAATTA
CAAAGAGAGAAAGAATCGCTCGAGAGACAGTTAGAAGATCAATCAAAGAG
GATTGAAGGTTGTAATGAGGCTTACGAAAGTTTGCTTCTTGAAAATAATC
AATGTAAAATTCACAACGAGTCGATATTAACTTTGGAAAACGAAAGAACT
CAACTTCTTGAAGAANACAACGAGTCGATATTAACTTCGGAAAACGAAAG
AACTCAACTTCTTGAAGAAAACGACCTACAACGACAAGACATTGAACACC
TCGAATCTGAACGTACGCGTTTGAGTGAGGAATTAAGACTTTTGAAAAGT
GTTCATGGTCAGATTTCAGGAAAGGCAAAAAGTTTGGCGCAAGATCTCAA
ATCCTTGAAGCAAGAACACAAGGAGCGAGAGGAAAACCTTCGAATCAAAA
TTGAAGCACTGGAATTGACGCTTGAAGGTTTgttcattattattattttt
ggacctaccccggtggggtggaggtcctataaattaacctttgtccgtct
gtccgtccgtctgtccgtccgtccgttagttaccagcttttctcgagatt
ggctcattagttttttctaatgttttgcacaatgatgcaaaatggcaatg
cccaaaatgtgacggagcccgcttttcgaaaaaaaattttttccggccga
aaatggcggaaatatgccggaaaaactggtttttcggcattttctcgaga
tttcat
Run BLAST on NCBI

transcript from alignment at sc0000309:182246..194670+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018819 ID=TCONS_00018819|Name=TCONS_00018819|organism=Clytia hemisphaerica|type=transcript|length=12425bp|location=Sequence derived from alignment at sc0000309:182246..194670+ (Clytia hemisphaerica)
ATGTTTATAGCGGATGAACCCGACTAGAGAGAAGGTCAGGAAGCGAGAAC
ATCAGAGAAGGTCAAGAAACGAGAACATCAGAAGACTCCTAGAAGTGCCA
AGAATTTTACTTTGAGCTGATGTGGTTGGCAAGATGAGTTCACTCGTCAT
CCTTTCATCAGTGAGTTATTTTTTAGTTCTCCTTATATTTGGCCactttt
tccctctttttccaaaacttttagCTTTaatccagacgtccgcgctctcg
ataggatcgatcatcggaacggctcgatgacggatcgatatgtgatcgat
ggattacttaacgatccggataggagatcgatggaagattcagccattaa
aaagtcttgagtatcgatccttcgttgatccattatcgagctagtattca
ATATCAAGTataacgaccctcgacatggcccgagaattctcgggccaaaa
cttttattggaatgcgCATAAAGCCCgagcatggcccgaacatggcccaa
GTTTTCGGGCCGCGGGCGGGCCACACGCGCCACAAccagtgtagctctaa
agctctaaaacagcatctaataacatgaaaaccagaatatgattcttcaa
tgggaatcaaaactataaagtgtacttacaaacatcaatttgttaGATAT
aagtccatattcatttgacaacgcaaaacgtcaaattgacgttatgaggg
ggtggggggggtttcaaaagttaggtttgacgttataagaaatcaaaggt
atgcctttttgtgaaaatcgcggATATTTGTAACCACCAACCACACTATA
CTTTATAAGCTTTCGAAAACATATTCGTGTATGAagtacatgaaaatttg
ctgcttgcataatcccattggtttgcgctatgatatcattacatcatatt
ttcattgtttgcgcgATCGAGTGAACCACATCGCACAAGTGGGCAAAGAA
GGGGGTACGCCTAAAGCACGGCACCGACCTAGCGCCAAGCggagctttta
atttctttttaaataaaggtcattagttaaaagaacacatacacgCACGG
GTACAACCAAGTACAGTCTTTGCGACGGAACGGGttaactttgatgaaaa
atggctacaacttttggtatacatcagtacatcgcttgacgttatctgtg
ggggggttcagaggataacgtcaatttgacgttttgcgttgtcaaatgaa
tatggacaggtcccctaacaaaatttataacggcactgtcatcattgaca
ataaaacaaacaatattctgtcaagagccttgtaaacattccaacaactt
ccatcgaaatgatctatcacagttCAGTCTACCATtgtagcgcggtccga
ggattgatccgagaactctcgcagagcgcccgagctcccgcgcggcgcgc
accgcggggatgaaaaacttcaatctgtcaatcattttctcaagcgaaga
gtacgcgaaGCGATTCTAGCTTTACGATAGTGCCGCAGATCATCAATGGA
TAGTATTCAATTATCATTACCCTTTATTTTCAttactagaacttttgcaa
aaaaaaggaaaaatagaaaagttgtattttttactgctctattcacatac
tgaatttgaaagaacttctatgtggcatttttttgcaaacttcaaaaaaa
tgatttttgtcccgcctttgcgggattttggcccaagtgcttgagtgcag
catagggtacaaagtccaaatatgcgtttcccgtaatttttgtatgaaga
gttaggtNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNAAAACTTGATTTCACTTAAATATTTGCtattaaa
ctggtcctggttttaaactttgAAGCGTGGTCCACGAGGAGTTTGTTAAG
TTTATTTAGCAAGATGAACTAGATGAAACGCGAccgaaataaattaaaat
taacattttcacacattttcaacgtcattttcacgttttaatttcattat
gacTGGACAAGCTGGATTAATCAATGGAATCTTCTGNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNtcgtcatcgatcgttaatcgattcgtcatcgatcgtta
atcgatttgttatcgatcgtaaatcgagtatgagtcgatagggtcgataa
gatcgataaaaggtCGATGATAgattgataaataatcgataactaatcat
aagcttaaaaaaatcttgagtatcgatcctctatcgatcttcTATCtaga
tcgttaagtaatccatcgatcacatatcgatccgtcatcaagCCGTTCCG
ATGATTGATCCTATctagcgcggacgtctggtttAATAGTTCTATTATTC
TTGGAAAACCGTGGTGACCAgccattttttataaaagacgGTGGATaaac
cttttcgcctttccaagTGGAAGTTCGCTAGATTTTGTAGAAAGAGACAT
TAGGGATGAAAGTCTGTACAGTCtaatcgtaaagctagaatcgcttcgcg
tctCTTCGCTAGAGAAGATGATTGACAGAGTAAAGTTTTTCATCCGCGCG
AGAGCTCGCAGGCCTTCTGCgagagcgttctcggctcaatccttggaccg
cattaaaaatggtagacttgctgtgacagatcatttcgatgtAAGTTGTT
GGAATCTTTACAagtttttattgtcaatgatgacagtgcctttataaaac
ttttacaaattgGAGCGCTCCCGCAATTTTGTCACGGTGGACTTGACAGC
TTTGTCAAAacgtttcatttttttcaaaatgctgGTGAACAAGCTTTGAC
CATTGATTttagtcaatttgagggtgctgatttggAATTTAAATGTTACC
AATGTTTTTGCTCAGTttaaagagctctatcatgtagTGTAGACCCCTCA
AAAATCATTTccagggcttacaattttgcctaaaaacacaaaaaatcaca
aattacCCAAAAACTGTGGGTTTTTAAGCTtggtaaacattcaaaaagac
cttttcgcctttccatccggcatcttgaattgtatgcaaaaatacaggaa
caaaAAGGCTGTGGTTGGATTtggttggaaaatatgcaaaacataatgca
agtttacacaaagattaaaaagacaaagcattttataaagaaatattata
atcattatcagaacaataaaagatggaattttttaatccaaaaagaaata
tttacggAACAACAATAAGCCTttaagaaatttgttcttaaagacatagt
atattctgttttcatgccattaaaaaattccacgaagacggagtacacac
atcaactttcaaaacacgcaaactgaaagcagtaattgtTCCCGCATTGA
GTGCGAGTAGGCTTCCACTCTATGCGGGAGTATATGGTTCTCCTCCGTAA
CGTATTTTATATTTCTCAATGTTTCGTGCGCTTCTATTGTCTTGTTTTAT
GTATTGTCTTTGTCTTGTCTTGTCCCTTNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNAGTGCTTCGTTTTCAGTGTGCTTCGTCTAGG
TTTTGTTTGGGGGTTTGcgtcttttctgtttgccagcCTTTCGTTTCTTT
TGGGTCTAACTTAGGATATTATCAGTTTCTTGTAACTAGTTTATGGCAAG
TTTTCTAACTTCTAATTTTGTGCATTTGTTTTAGCCCTGAAATATATGGT
CAGAATATACTCATCGGGGTCAGTGATATATTCCTCGCTACTGCGTTAGC
AGTAACAGTAATTATGAGGTCACATATTCCtttctttgaagaaaatatta
aaaccccTGTTTTGATATACTcttgggtgcctaataaacatATACATGTA
TGTTTATTTTTTCGTGTcaaatttcccgcctgtacgcagCTTATTAGgac
ctgtacgtttatttattttgaagaattttcccgcctgtacgtttattccc
tcctgtacgtttatttattttaaccCAACACTGTATTGCTTGATTCATTA
CTGGAAATATCTTTTTGTTCAAGTAAGACGTGTAGAAAGGctgttaatta
cattcgaacgtATTGTGGGAGATTTCGAATGTTACACGAGTAAATTCGAG
CGTTCAATTTGAATTGAaacattcaaatcaaaacaaaatttttccctgta
cgtttattttatcctgtacgtttattatcTTAGCTCTATTTTCTCGCCTa
tacgtttatttcagcctgtatgtttattaattccaattttattcccaccc
tgtacgtttattttggtctgtacgtttattaggcacccgagagtacaAGG
TTAAGCCCAACAGGTCAGTAAAAGCCGCTGTAAATCAGGGGGTTCAGTGG
TTTGATCATTTGGTGGTTCtatcccaggagaataatttaccgtcagccga
ataaggattatttttctACCTTCGCTattgatttttcagcttgagtttat
gtctaatgttatggttttttgaagtgcttgttacAAGAGATGAGCAAATT
TAATTatctttagttttcaagagaagcaaatttaatctttcatctatata
ccgtgaagttggataacttgcatcagtgtggagggaaacttgcatagcca
tcaaatggcTGACCAATTAAGGGTTCGAACTCTCAAAAATGACACTCTCA
TTCTTGCCAGTTAACCGCTTTATCCACTCGGCCACTAGAGTTGATGGTCT
TAGGTTAACAATAATTAATAATACCATATACTTTTATTTGCCATgacctg
tataattttatttaccctgtcaaggtattaactttttaaacaaatgattt
tagatcaTTTCAAACATGCAGGAGCCGATCACTCATCAAGATCTTTAGGA
CTCCAATTCTGTAAGGGGACTGCAACAAACGGGCTGTAAACCCTGCTAGT
GCCTATGAAATGAGAATTTCCATCTGGGGGGTTAGGACACTCTGCTCTAA
TCTCCTTAAAGTCTCAAAAGACTGAAAAGAGAAGCTTTTTCTTGCATACA
GTACCCATATACAGCAGACAGAATTCACAGAGCGTACACGCGCGGGCGTT
TAAACAAGATCGCGCGGAATGCGGGtcaaaaaaattcccgtgagcaatct
cgttatttatcaaaaagtctcACATCTCtaatctaccatttttgttttga
ttcaactttgtattttaatgaccagccaggtcacactcatttgagggcta
tgcatgttaacctccactgatgcaagttactcgaTCTCACGGTACAACCC
GCCCCaaacaagattacactttaatatagtGAACCATAAACAATAACAAA
CTTATCCCATGTGATTGCAGGGATAATCGAAGATAAATGACAAGAGCAGC
CTCGCGGGCGTCGCCGTGCGCCTGCAAttataaaagtaaagaaaacaaCA
AACTTTTGTAATTTGCAGAACAAACAGCCCGGGTTAACAGATAAAGCTAT
CAAATCATAATGGTAGCCTAGGAGTGCActttttaaaagcaaaaccAACT
TCTTTGACTGGCTAGTTAGAGCTGTAGGTAAGGTGTCCGGAATTAGGCAT
TGTCCGCAATTGGGCAAGTGGTAAggcattaattttttctgatttttagc
atgaaagtaggataatgatcattggtaaaagatggttgaagcagattttc
acaaaaagatttttgcggCTCAAAAAACGAATATctatctataagaatcg
ctatttataagcataaatcaatgttcttagccaaattattatttttatta
ttattttttctaagcgaagaaaatgttttgagcaaatgagactttttttc
tcaaattccttacgaattttatctcattttgagccctCAGCTCAGCTTCC
CCATTTTTATGGTTGTTCCGCCTGGCCTGTAATtcattaaaatctttttc
aatagtgttgatagtttctcacAATAGATGtgcttttattatattttttt
gtattttgaccagttatgttttatgtttttcattgtttcaatcttcattg
attagtttgataactaggtaggtccataaaagtatcacttgttaactttt
aattgtgaaattttcaaaataaagtgTAAGCAAGCTTTCTCAGAATGTCA
ATTCTTAAATGAATATAGTAGTCCCTTTAAAATTGTTTAATCAGTTTAAG
CTGAGTAGCATCCAATTCCAGAATCAAGAAAACTTTAGTACACACCTTTA
ATTATTATGCATCAGCGTGTTATTGAAATTTTTAGTTATTCAACTTGACA
TTATGATTACGAAAATGGTATGGTGATGGATTGATTTCAATGTCCAGACA
AAATTTGTACAGTGTTTTTAAACAGGAATATCTCTTTTCACTAATGGTAG
AACTTCTTATGAATatgaatatttgaaattttgaaaagaaagtttgaaaa
tactGACATAAgcattttattacaaaatttctgTAATTTCTGATTTTAAT
GtcatcaaatattttgaaatatttttccttgAGCATACTTCTTTTGAGAT
AAGCTAtcattggtgaaaatttcatttagTTTTGTTGACTAGTCTCTgag
atgttcaatttttttttcatcacttAAAATCAGTTATGATGTAAAAACCA
GATGAGTAATTTTTTATGTTGGGAGGGATGGAACTGTTTCCTAAAATTAC
TGAAAATAAATTAGAGAGCTCTATGATCGATCCTGCAAAAGACTTTTCTT
GAAATTGATATTCAAATGTCATAGCTGAAAAAGCTGGTTAATCATATTAG
GATAATATTTTAAGGTGCAGCCACAAAttacattttctatttttcttagg
atgaaaatgaaatcaaagacATCAACGAAAAGTTATCAGAAGATGGTTTT
CATGATGACCTTTCTGAAGAACACAAATTACGTTACATTTGGAGGCTGTA
CAGAAGATCAGAGTGTAGTTTATCATCTTCTGTCGAGGACATCAACAAAT
TACGCAAACAGCAAGCTGATGATATGGTTCAGGTCATTATTTTTCACTTA
ACGACTTCATGTAGAAAACTACTTTGAGATTCGTCTAATCAATGAGATCT
TTTGAAAGAAGTATTTGGTTTTTATTAGATCATTTCTGCATGAATATAGT
ACACTCGATTACATGTCACTGATAACAATAAGGAAATATATCAAATCATG
TACCTAGAAAATGATACTTTCTAGActagctatattttcttaaaggTTTG
GCCTATTTATTTTCACAAAGTTTTGTTTGATCTTTTTAGGTTGAAGAATA
TATTTCCCACATCCAGCAATTATCTGACgaacaaaagaaatttctgGCGG
ATTATGAGAAAGAGAATGACCNATATTTCCCACATCCAGCAATTATCTGA
CgaacaaaagaaatttctgACGGATTATGAGAAAGAGAATGACCACCTAA
AACATGAAGCAGAATCTATCAAAAAGGTCCTTGAAGAATCTCTTGATCTC
TTTGATGAGGAGAATCGTGAAAATTCAACATTGGAGAAAATTGAAAACCT
TGTCAATAAACACAAAGTTCTGAATGAGAGCTTCGACCAGTTACGAATCG
AGAAAGAAATTCTATCAGAGACACTTTCTGAACATTCTTCTTctttcaaa
gaagaaatcaagtTAGTTGATTATCTTAATAAAGATACAGGAAGTTTTGA
TGATTTGAGTGACATGTTGAAAACTACTGAACCcctcgaaaaaatgaaaa
tcctgatgAACATtgcacaaaaacaaaatcaagatttAAAAAGCATGAAC
CACGATCGGAGGAAGCTTCAAGAGTATTTGTTGTTACATGATGAACATTT
TTATATGGAGCAAATTATCGAAAATCTCAAAGCGAAAGATGAAAAACATC
AATCTCTACAGGATGATCTGTTCgctttgaaaaaaactttaatcgATCCC
CACCACAAGTCTTTGAACTTTTCCCTCCATGTTGATTCTGATGATGATGA
CGGTGATGTAGAAGATTCTGAAATCGAGGAAGAATTCAGCACTCAAcatt
tcattgaaatcactcaaCGTTTTCAAATTATGAAACAAGAAATCAACGAC
CTGAACCAGCAAGTCACTTCCATCAATTCTGTAATAGATTCTGATGATCT
TGATTTTCACCAAGGTGCCACTATCGAAGAAAAGATTTTGTTAGTGAAAA
AATCGTTGGGCGAGCAATCAGATGTGATTCAGGAAAAAGATGAATCCATG
TCTAAACTTGCTGTTATTCTAAACTGCAAGCCCTCTGAAGAAGTGCTGGT
TACTTCAATttccaaaatgaaaaacactttcGAATTACAAGAGATAGAAA
TAAATAACATCAAACTAATATTTGACATCAAAAACATAGATGATGATCTA
GTATCGGCTGTGGTAAGTTGTGTTGAGGTAATGACAGAGAAAATTGAATC
CTTGGAAAGAGACCTGAACGCTGTTAAAGAGATGGTTGGTTGTTCATCAA
ATGTGAATGTTATTAAATCTCTAAAATTGTTGATAGATGGAAGAACGAAT
CTGAAGCAATTGGTAGAGGACTTTGCGGAGCTAACTGACACCAAATATTT
GCAGGGTGAAGAGAGAACCGAAATTGTTTTAGATTCTTTGAATGATATCA
AGACCAGATTGAAATATTATATGTCAGAGGAGGAAGAAATAAGAGAATTT
GTTCATGCAAACTGTGAGAAAGCTACAGATGATGAAATGTCTTTGCGTGT
TTTATTTGACGAGTTTACCAAGTTAAAGAAATNCAGACGATGAAATGTCT
TTGCGTGTTTTATTTGACGAGTTTACCAAGTTAAAGAAATCTGAAGAATT
GTTGAAGAGGGAATACATATCGCTGGAAGAACGGATAAAAGAATTTTGCG
TCGGACTTGTTGGACGTGAGCAAGCTACAGAAGACCACGATATTTGTCgc
attttgcaaaaatatgagGAAAATAAGAAAAGTGAAATGTTGGAATTGGT
GAATTTGATACACGATTCGGGGTTGGTGGACATTGAAACAAATTATGAAG
ACATCAAAGAAAACCTGACATTGCTCATACAGTGTTGCAAAGATTCAATT
TCTAACAAGAATGAAGAAATCTCAAGTGCAAAACAACTATTGTGCAATAA
CTTGCAATACAGTGAACTTCTAAAAGATGAGAAACTGGAAGATTCGATAC
GAGTTTTGATCGATGGTAAGAATCAGGCTCAAACTGTGATTGATGACTTT
TTAAGAGAAAACGGATTCGAAAACGAAAGTCAAATACTTCCCTTCGAacg
aaaaattacatttttctcaGATAAAGTAAGAGAAATGAAAAGTGATTTGA
GCAAAGCAgaatctgaaaaattgaaattcgaaGAAACAGAAACTCTATTA
AAAGCCAAAATTGATGCTATAAAACTCCCTGGTCCATCCCTAAATGAAGA
CATTTTGTCCAAAATCGAACACGTTCAGGAGCACGTGGTGAATTTAGAAT
CGGCTGTGGATGATCATCAGTCATTTGTGAAGGAGATCGAAAGTTTGTCT
TTCAATTTGATTGGTGATGGGAATGACAATATTGATGACATTAACAACAA
CATTGATACTCATCAGAGACTCCGATCTTTTTCTAAACGATACCAAAAAT
TGTGCGAGGAGGCATCAATTCTACACAAAATAGAACAGAGAATGGAGGCT
TCATCAGCTATCGTCGATACTTCTAAAAGTACACTCGAAAATTTTGATCG
TCTTGCAGAAGAACATGTACGCATGCACCAAACCCTGACTGGAAAAAATG
AACAATTAATTTCTCTGGAAAATGTGATAAAAGACTGCCATAAGGACTTG
CAAGAGGTAGAAGATCAAACCACGTTTGGAATATATGCCTCCGGTGGAGA
TGATGCGAGCTTTGATGAAATAACTAACCAATTCAAAAAGAACCTTTGCA
AGTTATGCAATGATTTACGGACGATAAAGCAATGCTTGTGTGACGGAGAC
TCGTCACAGCTTCCAACAATACAACAATGTGTACAAATAGCTCAGCGAAT
CGCTCAGGAGAAGCAACAAGTTTCAAGGACAATAGAAAACTTACAGTCTG
CAACAACAACTATTAACGAGGAGCCAGCTTTAACTGACATTGGTAGTTTT
GAGGATCTTTCTAATGCTTTCTTGGTTTTACTTAAAGTCTACGCTGAAAT
TAAATCACGTTTAGAAACTCTTCAGAATGAACACGGAGATTTGGAAACGC
AAAACACCTCTATGAAGCAAAGCTTAGAACAACAGAATGGGGAAATTGAA
ACCTTGTTGTCAAATATTGAACGCTTAGAGATGAGTAAGCAGGAAAACGA
CCTTGAGATTCAGAAATTACAAAGAGAGAAAGAATCGCTCGAGAGACAGT
TAGAAGATCAATCAAAGAGGATTGAAGGTTGTAATGAGGCTTACGAAAGT
TTGCTTCTTGAAAATAATCAATGTAAAATTCACAACGAGTCGATATTAAC
TTTGGAAAACGAAAGAACTCAACTTCTTGAAGAANACAACGAGTCGATAT
TAACTTCGGAAAACGAAAGAACTCAACTTCTTGAAGAAAACGACCTACAA
CGACAAGACATTGAACACCTCGAATCTGAACGTACGCGTTTGAGTGAGGA
ATTAAGACTTTTGAAAAGTGTTCATGGTCAGATTTCAGGAAAGGCAAAAA
GTTTGGCGCAAGATCTCAAATCCTTGAAGCAAGAACACAAGGAGCGAGAG
GAAAACCTTCGAATCAAAATTGAAGCACTGGAATTGACGCTTGAAGGTTT
gttcattattattatttttggacctaccccggtggggtggaggtcctata
aattaacctttgtccgtctgtccgtccgtctgtccgtccgtccgttagtt
accagcttttctcgagattggctcattagttttttctaatgttttgcaca
atgatgcaaaatggcaatgcccaaaatgtgacggagcccgcttttcgaaa
aaaaattttttccggccgaaaatggcggaaatatgccggaaaaactggtt
tttcggcattttctcgagatttcat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010542XLOC_010542Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018819-exon-sc0000309-1491911889:182246..182405TCONS_00018819-exon-sc0000309-1491911889:182246..182405Clytia hemisphaericaexon
TCONS_00018819-exon-sc0000309-1510915933:182246..182405TCONS_00018819-exon-sc0000309-1510915933:182246..182405Clytia hemisphaericaexon
TCONS_00018819-exon-sc0000309-1575043694:182246..182405TCONS_00018819-exon-sc0000309-1575043694:182246..182405Clytia hemisphaericaexon
TCONS_00018819-exon-sc0000309-1491911889:190445..190627TCONS_00018819-exon-sc0000309-1491911889:190445..190627Clytia hemisphaericaexon
TCONS_00018819-exon-sc0000309-1510915933:190445..190627TCONS_00018819-exon-sc0000309-1510915933:190445..190627Clytia hemisphaericaexon
TCONS_00018819-exon-sc0000309-1575043694:190445..190627TCONS_00018819-exon-sc0000309-1575043694:190445..190627Clytia hemisphaericaexon
TCONS_00018819-exon-sc0000309-1491911889:190885..190905TCONS_00018819-exon-sc0000309-1491911889:190885..190905Clytia hemisphaericaexon
TCONS_00018819-exon-sc0000309-1510915933:190885..190905TCONS_00018819-exon-sc0000309-1510915933:190885..190905Clytia hemisphaericaexon
TCONS_00018819-exon-sc0000309-1575043694:190885..190905TCONS_00018819-exon-sc0000309-1575043694:190885..190905Clytia hemisphaericaexon
TCONS_00018819-exon-sc0000309-1491911889:190979..194670TCONS_00018819-exon-sc0000309-1491911889:190979..194670Clytia hemisphaericaexon
TCONS_00018819-exon-sc0000309-1510915933:190979..194670TCONS_00018819-exon-sc0000309-1510915933:190979..194670Clytia hemisphaericaexon
TCONS_00018819-exon-sc0000309-1575043694:190979..194670TCONS_00018819-exon-sc0000309-1575043694:190979..194670Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000309supercontigsc0000309:182246..194670 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.00504781	0	0	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00018819 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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