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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018811 ID=TCONS_00018811|Name=TCONS_00018811|organism=Clytia hemisphaerica|type=transcript|length=1037bp
CAGGGCTGGAGAATTCAGgagtttgaatttaaaaattataGAATTTTATA
GTGGTGGCAAaagtttataaaatatttcatcgtTAGATTAAGAATTTGAC
TATGAACTATTTCAAAAGTCGGCCGAGAAAAAATGTCTAGAAATATTGGA
TGTTCCCAAGAGAACAATCTTTTGCATTTCATTAACATTGATTTTTAAGT
CCATTATTTGTTCaataagtttttgaaagttttcatgGATCGACCCTAAA
GCTCCAATGACGATTGGTATGGTGTTGACTTTCCGACCATTCCAAAGTCT
ACATATTTCGTAACCTTTTCGTTTCGTTTTTGTGCGATGTTGGAATCAAG
TGGTACCGCTATATCTATTAGTTGGATGTCTCGAGATTGTTTATTTAGGT
ATATGATATCGGGTTTGTTGTGGGTGACGCGTCTATCCGTTTGTACTGGG
AATTCCAGAGGATTTTAACGTTATCGTTTTCGAGGATAGGTTTGGGATCA
TATTGGTACCATTTAGTGGTTGTTGGTTCGATGAATTGGTATTTTTCGGT
TTGGATTTGACGGTTTGGATTTTTTGATTGGTAGTACGGATGGTTTTGAC
GCGGGTTTTCAGTTGTTCGTTGTTGAGTTGTTGTGATTGTTCTTTGTCGA
TGTTGAGTTCTCTGAGGTATGTTTCGGCTTTTTGATGGATGGACTTTGCA
CCTTTGGATGTTTGTGACGTTGATACTAGCAGAATAAGACGTTCTGTGGA
GTTCTTTAGATATCTGCTGTACTGGATGATCTGGTTCTTGTAAAGGTCTG
CGATGTTGAGTAGACCTCTGCCTCCTTGTTTTCGACTGATGTATACTCCG
TCAACGTCGCTGTTGAGGTGGAGCCTATGATATTGACGTAAGGTGTTTCT
CATTTCTCGGTCAACCTCTTCCAGTTTGGTAACTGACcactcaagtgagt
tacggcatgtccaaggtaaaagtgaaccagttccactcactttcaaaatg
tcaaacatagctggaaagaagcgccaTATGATGTAGA Run BLAST on NCBI transcript from alignment at sc0000309:144369..145791+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018811 ID=TCONS_00018811|Name=TCONS_00018811|organism=Clytia hemisphaerica|type=transcript|length=1423bp|location=Sequence derived from alignment at sc0000309:144369..145791+ (Clytia hemisphaerica)
CAGGGCTGGAGAATTCAGgagtttgaatttaaaaattataGAATTTTATA
GTGGTGGCAAaagtttataaaatatttcatcgtTAGATTAAGAATTTGAC
TATGAACTATTTCAAAAGTCGGCCGAGAAAAAATGTCTAGAAATATTGGA
TGTTCCCAAGAGAACAATCTTTTGCATTTCATTAACATTGATTTTTAAGT
CCATTATTTGTTCaataagtttttgaaagttttcatgGATCGACCCTAAA
GCTCCAATGACGATTGGTATGGTGTTGACTTTCCGACCATTCCAAAGTCT
ACATATTTCGTAACCTTTTCGTTTCGTTTTTGTGCGATGTTGGAATCAAG
TGGTACCGCTATATCTATTAGTTGGATGTCTCGAGATTGTTTATTTAGGT
ATATGATATCGGGTTTGTTGTGGGTGACGCGTCTATCCGTTTGTACTGGG
AATTCCAGAGGATTTTAACGTTATCGTTTTCGAGGATAGGTTTGGGATCA
TATTGGTACCATTTAGTGGTTGTTGGTTCGATGAATTGGTATTTTTCGGC
TAGTAGGAGGTGGATGTAGCGGTAGACGTTGTTGTGTCGTTGGGTGTATT
TGGTAGGTGCGAGGGTAGGGCATCCAAAGATGACGTGGTGGATGGTTtca
ggtttggttttataggctTTGCAGGTATAGTCATTTGTTGTTTTGTGGAT
GTGTTTTTTGGTGTATTTGGTTGTGATGGCGTTTTCTTGAATTGCGCAGA
TGGTGGATTCTGTTGCTCGTTTGAGTGTGGAAGATCGTAGCCATGAAAGG
GATGCGGTTTTGTCGATGTGGGGTTGTTCTAGTGTGTTGAAGAATTGGCC
ATGCATAGGTTTGGATTTGACGGTTTGGATTTTTTGATTGGTNGTGGGGT
TGTTCTAGTGTGTTGAAGAATTGGCCGTGCAAAGGTTTGGATTTGACGGT
TTGGATTTTTTGATTGGTAGTACGGATGGTTTTGACGCGGGTTTTCAGTT
GTTCGTTGTTGAGTTGTTGTGATTGTTCTTTGTCGATGTTGAGTTCTCTG
AGGTATGTTTCGGCTTTTTGATGGATGGACTTTGCACCTTTGGATGTTTG
TGACGTTGATACTAGCAGAATAAGACGTTCTGTGGAGTTCTTTAGATATC
TGCTGTACTGGATGATCTGGTTCTTGTAAAGGTCTGCGATGTTGAGTAGA
CCTCTGCCTCCTTGTTTTCGACTGATGTATACTCCGTCAACGTCGCTGTT
GAGGTGGAGCCTATGATATTGACGTAAGGTGTTTCTCATTTCTCGGTCAA
CCTCTTCCAGTTTGGTAACTGACcactcaagtgagttacggcatgtccaa
ggtaaaagtgaaccagttccactcactttcaaaatgtcaaacatagctgg
aaagaagcgccaTATGATGTAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018811-exon-sc0000309-1491911889:144369..144916 | TCONS_00018811-exon-sc0000309-1491911889:144369..144916 | Clytia hemisphaerica | exon |
| TCONS_00018811-exon-sc0000309-1510915933:144369..144916 | TCONS_00018811-exon-sc0000309-1510915933:144369..144916 | Clytia hemisphaerica | exon |
| TCONS_00018811-exon-sc0000309-1575043694:144369..144916 | TCONS_00018811-exon-sc0000309-1575043694:144369..144916 | Clytia hemisphaerica | exon |
| TCONS_00018811-exon-sc0000309-1491911889:145303..145791 | TCONS_00018811-exon-sc0000309-1491911889:145303..145791 | Clytia hemisphaerica | exon |
| TCONS_00018811-exon-sc0000309-1510915933:145303..145791 | TCONS_00018811-exon-sc0000309-1510915933:145303..145791 | Clytia hemisphaerica | exon |
| TCONS_00018811-exon-sc0000309-1575043694:145303..145791 | TCONS_00018811-exon-sc0000309-1575043694:145303..145791 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000309 | supercontig | sc0000309:144369..145791 + |
Blast
The following BLAST results are available for this feature:
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