|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018751 ID=TCONS_00018751|Name=TCONS_00018751|organism=Clytia hemisphaerica|type=transcript|length=1214bp
GATTGACACGTATGTGGAGCACTATTACACCCCTGCCTCTGTAACCCAGT
GGGATCCACCCCACTGGTCACCCCAGTgaaatttctttccaaaaatggct
catttttgagccccactggacaaatcactcaccccactggaatGCTGTAG
TAAAAAAACACCCcattgaaaatgatgaaaagtttACACATACCTCACTC
GGAATGCACTTATTTAACGTACCCCAGTAgaaattttctctcaaaaaatc
aCCCCACTAGAATTTTCTCCTTCCCCTTCTTTAAAAGTGAAATatccaaa
aaagcaaaaaaaattctgctcgcttcgctcgctcaCCATCAAATGTTTCA
CTTCAATATATTAACTGTATTCAACCCGACTTCTATTGTTATTGTCTTGG
TCATTTTAAAACGTAGAAAATGCCAAACAAGAGGGGTTGGAAATCAAACA
TTTCTCTGTCAGCGCAAGCAAGCAACACAAGCAAGCTAGGTTATAGCCTG
AAAGATTTTCGAGAGGCTTTCTCACTTGCGTAGATACTGAAAGAAAGACC
TCTACTTGAATCATGTCGACTAAACATTACTAGGTTCCAGAGTTTATAAA
ATTTCATATAACGTACTGCTCCTCTATAGCCCCCTTCCCCCAAACCTCAT
TACATTTCCTGTTGCAACGTAAGAGTAGATCAACCTGATCAAGATTATAT
TTCTAGTGATATTTAGTAGCATGTAAGAAGCAGATTTTTACTAGCACTAA
ACCAAAAGCACCTTCTATCGATAAGATTAAGCGGTCTACAGTATAACACA
CAGGCTAACCAAAATTTAGCTCATACAAAAAATTCTTCCTCACCCCACTG
AATGTCAAGGAAGTTTTCTCCACCCCactcaatatttgaaagaaaatttt
tcaccccAGTGACTTTCAGGTTTTTTGATTCTCACCCCACTGGGTAATCA
ACACCCACTGGGGCACGGAGACAGGGTGTATTAtttgtcagaaagaggaa
atGAAAAACATAGTTTACTTATATCAGCATGATAtaacaaaaggcagaca
ctgtcccgatatgaaatatgtgtctgatatgaaacgcgggaacacttatg
taaaaacaaaacctttaattcttATATAGTATGAGAACAATTTGatgtat
aaaataaaaatgaacatGTTTTTCAAACAGGAAACTTAAATAAACCAAAT
TGCATTCATGTTTG Run BLAST on NCBI transcript from alignment at sc0000305:71123..72336 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018751 ID=TCONS_00018751|Name=TCONS_00018751|organism=Clytia hemisphaerica|type=transcript|length=1214bp|location=Sequence derived from alignment at sc0000305:71123..72336 (Clytia hemisphaerica)
CAAACATGAATGCAATTTGGTTTATTTAAGTTTCCTGTTTGAAAAACatg
ttcatttttattttatacatCAAATTGTTCTCATACTATATaagaattaa
aggttttgtttttacataagtgttcccgcgtttcatatcagacacatatt
tcatatcgggacagtgtctgccttttgttaTATCATGCTGATATAAGTAA
ACTATGTTTTTCatttcctctttctgacaaaTAATACACCCTGTCTCCGT
GCCCCAGTGGGTGTTGATTACCCAGTGGGGTGAGAATCAAAAAACCTGAA
AGTCACTggggtgaaaaattttctttcaaatattgagtGGGGTGGAGAAA
ACTTCCTTGACATTCAGTGGGGTGAGGAAGAATTTTTTGTATGAGCTAAA
TTTTGGTTAGCCTGTGTGTTATACTGTAGACCGCTTAATCTTATCGATAG
AAGGTGCTTTTGGTTTAGTGCTAGTAAAAATCTGCTTCTTACATGCTACT
AAATATCACTAGAAATATAATCTTGATCAGGTTGATCTACTCTTACGTTG
CAACAGGAAATGTAATGAGGTTTGGGGGAAGGGGGCTATAGAGGAGCAGT
ACGTTATATGAAATTTTATAAACTCTGGAACCTAGTAATGTTTAGTCGAC
ATGATTCAAGTAGAGGTCTTTCTTTCAGTATCTACGCAAGTGAGAAAGCC
TCTCGAAAATCTTTCAGGCTATAACCTAGCTTGCTTGTGTTGCTTGCTTG
CGCTGACAGAGAAATGTTTGATTTCCAACCCCTCTTGTTTGGCATTTTCT
ACGTTTTAAAATGACCAAGACAATAACAATAGAAGTCGGGTTGAATACAG
TTAATATATTGAAGTGAAACATTTGATGGtgagcgagcgaagcgagcaga
attttttttgcttttttggatATTTCACTTTTAAAGAAGGGGAAGGAGAA
AATTCTAGTGGGGtgattttttgagagaaaatttcTACTGGGGTACGTTA
AATAAGTGCATTCCGAGTGAGGTATGTGTaaacttttcatcattttcaat
gGGGTGTTTTTTTACTACAGCattccagtggggtgagtgatttgtccagt
ggggctcaaaaatgagccatttttggaaagaaatttcACTGGGGTGACCA
GTGGGGTGGATCCCACTGGGTTACAGAGGCAGGGGTGTAATAGTGCTCCA
CATACGTGTCAATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018751-exon-sc0000305-1491911889:71123..72336 | TCONS_00018751-exon-sc0000305-1491911889:71123..72336 | Clytia hemisphaerica | exon |
| TCONS_00018751-exon-sc0000305-1510915933:71123..72336 | TCONS_00018751-exon-sc0000305-1510915933:71123..72336 | Clytia hemisphaerica | exon |
| TCONS_00018751-exon-sc0000305-1575043694:71123..72336 | TCONS_00018751-exon-sc0000305-1575043694:71123..72336 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000305 | supercontig | sc0000305:71123..72336 . |
Blast
The following BLAST results are available for this feature:
|
