TCONS_00018749 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018749
Unique NameTCONS_00018749
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1229

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018749 ID=TCONS_00018749|Name=TCONS_00018749|organism=Clytia hemisphaerica|type=transcript|length=1229bp
CAGATGGCTAAATAAATTGTTAACTGtctaatacacgctttttcataaga
atatcgtCTTTAAGAATATCTATgtgaaattggccaaatcgtaagaatat
cCGCCGCAACCGCCACAGCTGCATGggaaaatcttgagaaacatTTTCAG
CAAAATACTCTTTCTAAAAACTCTCTAGGTCGGAGAAAGAGGCATGATGA
GTAAAAGTAACTGTATCTATATTCCTGATGAACACCAGAGATATGATCCG
GACCTTTTCGTTATTCCAAAACATTACAGAGATAGCATCGATTACGTTTT
GATACCACATGGTTTGCTTTTGGACAGAATCGAACGTCTTGCTCAAATGA
TCATTGAAGATTATGGTGGGCAATCTGTCACTTTATTATGTGTCTTAAAG
GGTGGATTTCGATTTTGTCAAGACATTATGGCCACCGTGGAAAGGTTGAA
TACAAGTGCAGAGAAAACTGTCCAGATGAATATcgattttataagagcaa
agaGTTATTCCAACAATCAACAAGGAGAAATACAACTTTCAACTCATGGA
CCAGCTCTAGATTTACTAAACAAGAATGTATTGGTTGTCGAGGATTGCAT
AGACTCTGGCAGAACCATGAAGTTACTGTTGGCAAAATTATCGGATGAAA
AACCTAAATCGTTGAAAACAATATGTCTGGTTTTGAAACGTAATAAGAAG
AATACAACTGGATACCGACCTGACTACTTAGGGTTTGATATTCCTGATAC
TTGGATCACCGGCTATGGTGGATTTGATTACAACGAATACTTCAGAGATC
TCAATCATGTCATTGTTTTGAATGCACATGGCAGACAGAAGTATGATACT
TCTAAAACATCTCAAGAAGGATAACCACACTTTAGAAATCAGAGTAAAGA
CACATACAAACTAGAGAGAGCAGAGAGCATACAGATGAAAATAGAGAAAA
GGCGCGTCAGGAATGAGCTCTTTGGTACCTGATCACAAATGAATGATTAg
atataattttttaactttaaaaattttatcggAATAAAGATATTATATAT
ATAGAAAGTTTTCATGTTAAGAAACAAAAGGgccgaattaaatttttgac
aaaacttttttgtaaaGTAAATGAAGAAGGAGGCATATAATACCTTTTTA
GCCATGGGTCCAATACGCACTTCTCACGCACGATGAACCAACAGCATTGC
AGGCttggaaaataatgaaataatcaaat
Run BLAST on NCBI

protein sequence of TCONS_00018749-protein

>TCONS_00018749-protein ID=TCONS_00018749-protein|Name=TCONS_00018749-protein|organism=Clytia hemisphaerica|type=polypeptide|length=226bp
MMSKSNCIYIPDEHQRYDPDLFVIPKHYRDSIDYVLIPHGLLLDRIERLA
QMIIEDYGGQSVTLLCVLKGGFRFCQDIMATVERLNTSAEKTVQMNIDFI
RAKSYSNNQQGEIQLSTHGPALDLLNKNVLVVEDCIDSGRTMKLLLAKLS
DEKPKSLKTICLVLKRNKKNTTGYRPDYLGFDIPDTWITGYGGFDYNEYF
RDLNHVIVLNAHGRQKYDTSKTSQEG
Run BLAST on NCBI

transcript from alignment at sc0000305:340810..349303-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018749 ID=TCONS_00018749|Name=TCONS_00018749|organism=Clytia hemisphaerica|type=transcript|length=8494bp|location=Sequence derived from alignment at sc0000305:340810..349303- (Clytia hemisphaerica)
CAGATGGCTAAATAAATTGTTAACTGTCTAATACACGCTTTTTCATAAGA
ATATCGTCTTTAAGAATATCTATGTGAAATTGGCCAAATCGTAAGAATAT
CCGCCGCAACCGCCACAGCTGCATGGGAAAATCTTGAGAAACATTTTCAG
CAAAATACTCTTTCTAAAAACTCTCTAGGGTAAGCTTCACAAAATTTGAT
AAGAATATAGTCATTTTGTATTTGGTTAGGAGAAAAAAATGCTTCTTTTG
TTCGCGACGACTTAGATTGAAACTTTGAGGCTGAAATATATTTTTATCTC
CAAATGTGCACTCAAAAGTCCCAAACTGTCAAATTGAGCACTCGTCATCA
TGTTTATATAAAAGTCCAGTCTAAACAAATAAGAATACGTTAAGAAGATT
TCACCCTATATTTTGGCAATTTCTTAAGAATACTTGTACCTCATCTAAAG
TACACTGTTGTTATAAAAAAAACGTGTACTGGTAATCTTTTTCGAAAGTA
AGTAATTAATAATTCCATTACATTTTGAATGAGATTTTTAAGCACGATAT
ATGGCATTTTATTCTGCAGTCGGAGAAAGAGGCATGATGAGTAAAAGTAA
CTGTATCTATGTGAGTGTTTTTCTTTTAAAGTACTGTAACATAACATTCG
CCTAGGGGACATTCACGATTACCTTTTCAACGATCACAAAATCGCAATCT
AAGTCAATTTCTATTATGAAAACGTTATTCGCACTGACAACAAAAAAAAC
TTTTATTGGGTGGATATTTTAGCAGCAGAAGTCCAAACGAGCTCCCGACA
TATATGGCAGTAAGAAACACAGTTTTTAATATTTTCATGATTGTACGTAC
TTTTAGATTCCTGATGAACACCAGAGATATGATCCGGACCTTTTCGTTAT
TCCAAAACATTACAGAGATAGCATCGATTACGTTTTGATACCACATGGTT
TGCTTTTGGACAGGTATGGCTTTTTCAAAAAAAAATTTTTATTTTTTTAA
ATACAAAAGTTATAACGGGTTCGTAGTTGGCACCACTCGACACACAATTA
CTATTTCAGGCTCAAAGATTTTCAATGAAAATCACGCTATGCGCACTTAT
CACAAAATTTTAAAAACCATGCGATCTTCACGGAAGAAAATATCCCAAAT
CAAGCCTTCGTAATGACTGCTGGGCGGGGTGGCTATTATGAGTTTGCAGT
GAGTAGCATTTTTCAATGCTCTCGGCGCATGATACTGTTAGGATGAGTGA
GTAATATGTATGCTGTGTTTCCTGCAGCTGAGACGGTTCTTTTTTGATTT
GTCTAGACCCTGGCTGAAAACGAAGCAGATTAAACAGCACTTTAACCGTA
GATCTGGCGGGTTAAGACTTAGGGTTGTTTCAGTCGCTCCTCTGTTCTTT
AAAGGGAGTTTTTATCTTTACCAACTGCAAATCTTCGCTAACACTTAAAA
TAATAATAATCAATATGTATGTCACAATTGTGTGCGAATAATGAGATCCT
TAAAAAGTAAAATCAGAGAAAACACGTACCATATATTGCAAAAGGAGATT
GTTAAGAAAGACGACGAAAACAAAAAAACTAAAAAAAGAACTGACCAAAA
ACCGCAAAGTCATCAACAATGACATCGAAAAAATCATAACAGAAAAGATG
ACCCACTTTGAAGCCAAAACAAGGAAACGATAAAAGAAGAGATGTACAAC
AGACAAAAGATTTTATGAAAGAGTCATCACGTATAACCTACGCTGAAACC
AAAGTACACAAGGAGAGAAAAAAGAGATATCGAATCAAGAAAAAGAAACA
TCATGGACTCCCTGAACAAATTGAAGAAACGAAAGAAGAAGATCAAGAAA
AGGACACAAAGAAGATTGAGGATCTACTCAAAGATATCAAACCAACGCAT
CAACATCGTATTTGGTTTGAATGCCGAAAATGGGCCGAGGAAAACGCATC
CGATAAAGGTGACTTTACAAAGTGAAGAAGAAAAAGAAAGAATCAAGGGC
AACCTAAACAAGTTGAAGTGGCTTGCTTGAATATCATCTAAACATCACCG
ATGATTTCATCATCAATGAAAGAAGAAAAATCAAAGAGATGTGCGAAAAA
GCTAAGAAATGGAACTTTGAATGTGATGGTGATTTCATTTGGCGTGAGAG
AGGACGTCCNATGGGTTGCCAAAAAAACATTAGCTTATTTTTAAATTGTA
AAGTAGCCTTTGTTGCTACCTTTTCGTCAACATGAAATAAACTATTACAT
ACACATGCATACATAAATACAAAGAGTAGATTCATAAACTCGCTATGACT
GTATCAATAATATTGCTTCAAACCATAGAATCGAACGTCTTGCTCAAATG
ATCATTGAAGATTATGGTGGGCAATCTGTCACTTTATTATGTGTCTTAAA
GGGTGGATTTCGATTTTGTCAAGACATTATGGCCACCGTGGAAAGGTTGA
ATACAAGTGCAGGTTTGTTGTCCTTTAGTTTATTACAGCCCCATGTTGTT
TTTGGAATGTTGCCAGTAGCCATCTCATCTATTTACAGTTATATGACTGA
AAATAGCAAGCACCGTTATATCAGAGCAGAGCTGTTTCTTGCCTTCGTCC
AATGCTTGTACTATTATAGNGTAGCCATCTCATCTATTTACAGTTATATG
ACTGAAAATAGCAAGCACCGTTATATCAGAGCAGAGCTGTTTCTTGCCTT
CGTCCAATGCTTGTACTATAGTTTTTTTACGGTTTTGGAAAAAAAACAGC
AAAGAACGATAAAAATAAATAACTCCTTGATTCAAACTCGAATCCAGTCC
CCTAGTTTGCGTTTTTATGATTTGATAGCGCTTAAGTGATACAAGTTGTT
CTAGGTGTGAGATTGATCTTGTTTCTTTATCCATTTAGAGAAAACTGTCC
AGATGAATATCGATTTTATAAGAGCAAAGAGTTATTCCGTAAGTTGATAA
TTCATTTTTTGAGTCTTTCCATTTCAGTAATTTCATAGTCAATAGCGAGG
TAGCAGGGGGGGGGTCAGGGGAGGGGCGCAGAAAGACAAAGGGTGAAAGG
ATGCGCCTTTGCTTTTTTACACCTTAGATTAGAATACGCAGTTTTTCAGC
CAAAAAGAAAATACTCAATAATCTTCGTGCTCGCTTTGCTACCGTGATTT
TTACAGAAATATTTACTTTGAATAGAGGGCGCCAAAATCCCAACTTAAAA
TCATCTCCCCAGTTTGGCCCAAATTTGGTCGACCCACCACGCTACTCCAT
AGTAGATCATCCGTTCTGCTAGTGACTACATTTTGCAGTTGAAGTAATGA
TTATCCTATAACTTGTACATTGATTACAAACCACACCCCGTTCTACAGAC
CCGCAGGGACTACACTGGAAAATTTGGCTAAAATTTCGCCCCCGTTAGAG
AAAATATTATATTTCCAATTTCAGCCTCACTAGAAAATTTACCATTTGAA
ATTCAAGAGAAATTGTTGTGTACTCCACTATCATCCCATACTTGACTATT
TGAGTTGGAAATGATTTAGAAATTATCAGCCCCAGTGGGAAAGAGTTTCA
TCGGGGTTGCGACTGCGATCGCATCTGTCTCAGACAGAGGTGTCAAATCA
GAAGCTTACTCTTAGGTGCCAAATAAACGCCCCCCCCCGCTTGTTAATNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNCCCCCCCCCCCCGACCTTATTAGGACCCCCCGTTTATTAATTTTT
AAGAATATTTTCAGTTAGCAAGAAGAAGTCGCCTTATTTTAACATATATT
TACCTTATTTTTGGCCTTTCAGAAGTACAATCTCCAACCCTCCCGGCAAT
TAGGTCCCCCCTGTTTATCAAAATTTCAAAAAAATAAGAGTAAAACTATT
TTCATTTTACTTTGCTTTTCTATAGAACAATCAACAAGGAGAAATACAAC
TTTCAACTCATGGACCAGCTCTAGATTTACTAAACAAGGTTGGGAAACTT
GAGTTATTCACGTATGAGTGGAGGTCTGCCTAAGCTGATTTTAATGGGGG
TGGAATCTTTTTTAGCTCTTTGAAATCTCTAAACTGTAACAAACTCCAAA
ACAAAACTGCCCTTCTTATATGCTCCTATTAAATCAAAAATTATATTTCT
TATCTCTTAGAATGTATTGGTTGTCGAGGTTAGTTGATGTTTTTCACCAC
ATCAAATCAAAAGCTACCAAACATTTCCATTTTAGGTTATCACCTAGAAG
TTAGGTGAAAAGTGAGATAGTTTTAAACATCCCTTTCTCTATGACCAGTG
AGAATCTTTAAGCCAGTCAAGATAGAATGAAACAACTGAATATGAATGTC
AATTTTCTCAGCTTGGTCATTTTTGACTAATTTTTTGTTGGGGGGAGAGC
TTCCACTGGGTCTATAACTTATATTTTGGCTATGGTTTATTTCTCGCTCA
CCAAAAGTCCAAAACTCAAATTAAGATGTAAAGCCACAGTATATATTCAG
CTCTCCTAGTAGCCGTATATTAAAAATAGACAAATCTTTATTCATTAGTA
ATACATGTGTGTCAAAAAACTTCTTCTTACGTATACTAGGATTGCATAGA
CTCTGGCAGAACCATGAAGTTACTGTTGGCAAAATTATCGGATGAAAAAC
CTAAATCGTTGAAAACAATATGGTAAGATAAGACATTTTCGAGCTTGTTA
TCAACAAACATTGCTCATTGAAGATTGTATACAATTGAACGAACACTAAA
AGCAATAAGTGTCAAAATTTTAAAAAAGACTCGTAATGAAAGCTTTACCA
AATCGTCTTTACCAAAGTTGAGAGTTTTTTATATGAATTGTAGTAGTAAT
TTCTTTTATGAGTACCAATTTTACATTAACACTCCTGTCTCATAGCCCTG
TTGAAACGTTTTCCCACAGCGGGGATAAAAATTTATTCCGAAATCCCAAT
CATCTTTTCCAAGCTTAAAAAATCCAGTGGGGATGGTTCTAAAATTGAAT
TTTGAAGGGGTTGTAATCAATTAAAGTCAATTTTCCAGTGCGGCTGAAAT
GTTGGCCACATTTTCCGGTGGGACTGGGGTTCAAGCGGGTCTGTGACACA
GGTACATTAGAACACGATACTAAAATTTTAACCTCTAAGAACAAATTGAG
AATAGCCTGAATCTTGAATTTCTAGAATATGAGAAAATGCATGTTGATAT
CAGAATATTAAGAACGCGTTACATTGACGAGCATTTAAGCCGTTGATTTC
AGATCCGAACGAAGGGGCTAGATTTGAAACTCTTTGATTGGAAAGCCACT
TATTTCCCATCCAAAACACAAACACTAGATTGAAAGTATGACCTAGCGCC
AGATTCCGAAAATAAAGGATCCGATTCAGTCCATCTTTATAAACACGGCA
CAAATCTTAGAATACTGATATAATCTGATAAAAAATCTGATAGAATACGA
AATATAGCATCCCAGCTGGCACACAACGTTGTTTTAACGTTCAAATAACG
TTATTTTGACGTTGTGAATGTCAAATGGACGTTGTTTTGACGTTGTGTGC
CGGCTGGGTATATTTTACTTGAGATCACTTCGTCTGTTACTTCAAGATTT
TTGATGTCAGAATGAATCTTTTCGGACTTTCTTTTGTTTTATGGCACGGA
TCTTAAGCCTTCAATTTGTTTTGCTTAATGATTTAAGATTCCTTTCTAAC
CCCTTCGAGGTTTTGATTTGATGATTTGAGTCTGTATTGGTCTAACCATG
TTAAATCAGCTTTAGCCGAATTCCTTATTGATTTCCTTAGTCTGGTTTTG
AAACGTAATAAGAAGAATACAACTGGATACCGACCTGACTGTAAGTATAC
CATGCTTAACAATGGTGACATTTCTAATGGACACTATGTATACCTTTTAC
CCTGATATTCGAGTTTCCTATCTGGCTGCTGAAAGGTTCTAAAACGAATA
TAAATCACAGTACGAAAATTTTGCCCTAGAAAATTATAAGAAGTCATATC
TTCTTCTTAATTGGCTTAACTATAAGAAGAATCTTCACATAAAAATAGTC
TTTTTGATCAACCTTTGTATTTTGTTTAGACTTAGGGTTTGATATTCCTG
ATACTTGGATCACCGGCTATGGTGGATTTGTAAGTTTCGATATTTTTTGC
GAAAACTATGATCATTTACTTTTAAATATTTTAAAGGGACATAAAAGAAG
TGAAATGTAAACATTGCGCGAACCACGTGTCATTAAAGAGAAATATTAAA
ATCACGTGTCCAAAACAAACTTGTAAAACAATTGAAACAATCCAAATCAG
TCATATTTGTTTTTATTTTTTATATTGACGTGACATTTGTTTTCATTTTC
TATCCCGCTGCATACGGTTTATTTATAAATTTCGAAAGTACTTATGTCCC
TTTAAATAAAGATTTTAAATAAAGATTCTAACCCAAAGACAATGGACCAA
AAAAAGAAGGACACTTTACTCTTACCGGAGCTTTGAATCATTGAAATATT
GTGGAATAATTTTGTCTCAATCGATAAAAAATCTCCCCCTCCTTCGCGCA
TGACCTAATGAGTCGGTTTTTTTTTTTGAAAAATCCATTTTATCGAATGG
GACAAAATTATGAAGATTTATATTTATATATATAAACCCTGTTCCGCTCT
TTTCTATTCTCCAAAACTAGATATTTGAAAAAACTTTACTGTAGGAAAGG
CAAAGAACGGTTTAAAATAATTGCCTCAAACCACATGTTTACTCAGAATC
TTGGAACACTGTCTAATTACTGAAACACTTTTGATTAATGAAACATTTTG
GATTTCCATGTTGTTTCTGATACTCTTGCTAAAGCAATCTCGTACCCAGA
GCCAGTTGTTTCCATTTTTATTTAACTGATGGACGTGATACTGATAGCAA
TCCTTCCGTGAACGCTATCAGAATCATCAAAAAGCGGAACTGAGGGACTG
GGTAAAAGAGCAGTTTGTTGCTTAAATGACTTTGATTTTATTCTATCTTA
GGATTACAACGAATACTTCAGAGATCTCAATGTAAGATCTTTATATACCT
TATATAGTTTGGAACCAAGAATCTAAGTTGACGCCGGGGGTGCACTCACT
GGGCAAAAAGTGACCGACAATGTGGGCTTCTCTGATAAGGGTCAACAAGA
AAGGTCATACATGTGCACTGCAAAGGCGTCAAAGGAGATAACGAAATTTT
TGAGAGTCAAATAATTATTTTGCTTTTGAACAGAAGATTTCCAAAAAAAG
TAAAATTCAAAGTAAAAGTTGATTTTCAAGTCTGCCCGAATTTAGCCGAA
TATTAGGCACTTTCCGCAATCACAACTAGTACGACAACGAGAACGTGAAA
ACATTAAATTCATACCTTTGAGCTGTCAAAACTTGTCAAAACTCTGAGTA
AACCCCAATTAGTCGTTTTCTCTTCTCGTGCCCGACGGCAAATCACTCAT
TTTGGCGTTGTCAGACAACGTGAGATTTCTAACATAAAAATCAACATCAA
GCAAAAAGTAAAAAAATTTTGAAAATTATATTTCAGAATCTTTAAACTTC
TTATCATTTTTTAGCTTTTTTCCTTGGGCTAGAAGTGTAAGTTTTAAGTA
TTGAATTTTTTAAATCCTGATTTTTAATTTGTTCAGTTTGTTTATCTCGT
TACTAATAACATTACAAAATAATTCTGACCATTACAGTATTTTTAGTTTG
CATTGAAAAAGAAAAGCTTCGAGATTTTCGCTACTTTAAAAAAATGATAG
ACGTTGTTGTTGTGAAAAATAATTGCAGAATCAAAAATGAGCCACAACGG
CAACTTCTCTATTTTTTCACACCTATATGTTATATCACAAGTTTTGCCGT
TGTCGTTGCCGTTCTCGTTGTGACTGCGGAAAGTCTCTATTTATCCGCTG
ACACGACGATTTCCAATTCGAAGAATGGTAATAGTTAGTAGTTATAATTA
TCTTTTTTTCTTTATTATAGCATGTCATTGTTTTGAATGCACATGGCAGA
CAGAAGTATGATACTTCTAAAACATCTCAAGAAGGATAACCACACTTTAG
AAATCAGAGTAAAGACACATACAAACTAGAGAGAGCAGAGAGCATACAGA
TGAAAATAGAGAAAAGGCGCGTCAGGAATGAGCTCTTTGGTACCTGATCA
CAAATGAATGATTAGATATAATTTTTTAACTTTAAAAATTTTATCGGAAT
AAAGATATTATATATATAGAAAGTTTTCATGTTAAGAAACAAAAGGGCCG
AATTAAATTTTTGACAAAACTTTTTTGTAAAGTAAATGAAGAAGGAGGCA
TATAATACCTTTTTAGCCATGGGTCCAATACGCACTTCTCACGCACGATG
AACCAACAGCATTGCAGGCTTGGAAAATAATGAAATAATCAAAT

Coding sequence (CDS) from alignment at sc0000305:340810..349303-

>TCONS_00018749 ID=TCONS_00018749|Name=TCONS_00018749|organism=Clytia hemisphaerica|type=CDS|length=7491bp|location=Sequence derived from alignment at sc0000305:340810..349303- (Clytia hemisphaerica)
CATGTCATTGTTTTGAATGCACATGGCAGACAGAAGTATGATACTTCTAA
AACATCTCAAGAAGGATAAGATTACAACGAATACTTCAGAGATCTCAATA
CTTAGGGTTTGATATTCCTGATACTTGGATCACCGGCTATGGTGGATTTT
CTGGTTTTGAAACGTAATAAGAAGAATACAACTGGATACCGACCTGACTG
ATTGCATAGACTCTGGCAGAACCATGAAGTTACTGTTGGCAAAATTATCG
GATGAAAAACCTAAATCGTTGAAAACAATATGAATGTATTGGTTGTCGAG
AACAATCAACAAGGAGAAATACAACTTTCAACTCATGGACCAGCTCTAGA
TTTACTAAACAAGAGAAAACTGTCCAGATGAATATCGATTTTATAAGAGC
AAAGAGTTATTCCAATCGAACGTCTTGCTCAAATGATCATTGAAGATTAT
GGTGGGCAATCTGTCACTTTATTATGTGTCTTAAAGGGTGGATTTCGATT
TTGTCAAGACATTATGGCCACCGTGGAAAGGTTGAATACAAGTGCAGATT
CCTGATGAACACCAGAGATATGATCCGGACCTTTTCGTTATTCCAAAACA
TTACAGAGATAGCATCGATTACGTTTTGATACCACATGGTTTGCTTTTGG
ACAGATGATGAGTAAAAGTAACTGTATCTATCATGTCATTGTTTTGAATG
CACATGGCAGACAGAAGTATGATACTTCTAAAACATCTCAAGAAGGATAA
GATTACAACGAATACTTCAGAGATCTCAATACTTAGGGTTTGATATTCCT
GATACTTGGATCACCGGCTATGGTGGATTTTCTGGTTTTGAAACGTAATA
AGAAGAATACAACTGGATACCGACCTGACTGATTGCATAGACTCTGGCAG
AACCATGAAGTTACTGTTGGCAAAATTATCGGATGAAAAACCTAAATCGT
TGAAAACAATATGAATGTATTGGTTGTCGAGAACAATCAACAAGGAGAAA
TACAACTTTCAACTCATGGACCAGCTCTAGATTTACTAAACAAGAGAAAA
CTGTCCAGATGAATATCGATTTTATAAGAGCAAAGAGTTATTCCAATCGA
ACGTCTTGCTCAAATGATCATTGAAGATTATGGTGGGCAATCTGTCACTT
TATTATGTGTCTTAAAGGGTGGATTTCGATTTTGTCAAGACATTATGGCC
ACCGTGGAAAGGTTGAATACAAGTGCAGATTCCTGATGAACACCAGAGAT
ATGATCCGGACCTTTTCGTTATTCCAAAACATTACAGAGATAGCATCGAT
TACGTTTTGATACCACATGGTTTGCTTTTGGACAGATGATGAGTAAAAGT
AACTGTATCTATCATGTCATTGTTTTGAATGCACATGGCAGACAGAAGTA
TGATACTTCTAAAACATCTCAAGAAGGATAAGATTACAACGAATACTTCA
GAGATCTCAATACTTAGGGTTTGATATTCCTGATACTTGGATCACCGGCT
ATGGTGGATTTTCTGGTTTTGAAACGTAATAAGAAGAATACAACTGGATA
CCGACCTGACTGATTGCATAGACTCTGGCAGAACCATGAAGTTACTGTTG
GCAAAATTATCGGATGAAAAACCTAAATCGTTGAAAACAATATGAATGTA
TTGGTTGTCGAGAACAATCAACAAGGAGAAATACAACTTTCAACTCATGG
ACCAGCTCTAGATTTACTAAACAAGAGAAAACTGTCCAGATGAATATCGA
TTTTATAAGAGCAAAGAGTTATTCCAATCGAACGTCTTGCTCAAATGATC
ATTGAAGATTATGGTGGGCAATCTGTCACTTTATTATGTGTCTTAAAGGG
TGGATTTCGATTTTGTCAAGACATTATGGCCACCGTGGAAAGGTTGAATA
CAAGTGCAGATTCCTGATGAACACCAGAGATATGATCCGGACCTTTTCGT
TATTCCAAAACATTACAGAGATAGCATCGATTACGTTTTGATACCACATG
GTTTGCTTTTGGACAGATGATGAGTAAAAGTAACTGTATCTATCATGTCA
TTGTTTTGAATGCACATGGCAGACAGAAGTATGATACTTCTAAAACATCT
CAAGAAGGATAAGATTACAACGAATACTTCAGAGATCTCAATACTTAGGG
TTTGATATTCCTGATACTTGGATCACCGGCTATGGTGGATTTTCTGGTTT
TGAAACGTAATAAGAAGAATACAACTGGATACCGACCTGACTGATTGCAT
AGACTCTGGCAGAACCATGAAGTTACTGTTGGCAAAATTATCGGATGAAA
AACCTAAATCGTTGAAAACAATATGAATGTATTGGTTGTCGAGAACAATC
AACAAGGAGAAATACAACTTTCAACTCATGGACCAGCTCTAGATTTACTA
AACAAGAGAAAACTGTCCAGATGAATATCGATTTTATAAGAGCAAAGAGT
TATTCCAATCGAACGTCTTGCTCAAATGATCATTGAAGATTATGGTGGGC
AATCTGTCACTTTATTATGTGTCTTAAAGGGTGGATTTCGATTTTGTCAA
GACATTATGGCCACCGTGGAAAGGTTGAATACAAGTGCAGATTCCTGATG
AACACCAGAGATATGATCCGGACCTTTTCGTTATTCCAAAACATTACAGA
GATAGCATCGATTACGTTTTGATACCACATGGTTTGCTTTTGGACAGATG
ATGAGTAAAAGTAACTGTATCTATCATGTCATTGTTTTGAATGCACATGG
CAGACAGAAGTATGATACTTCTAAAACATCTCAAGAAGGATAAGATTACA
ACGAATACTTCAGAGATCTCAATACTTAGGGTTTGATATTCCTGATACTT
GGATCACCGGCTATGGTGGATTTTCTGGTTTTGAAACGTAATAAGAAGAA
TACAACTGGATACCGACCTGACTGATTGCATAGACTCTGGCAGAACCATG
AAGTTACTGTTGGCAAAATTATCGGATGAAAAACCTAAATCGTTGAAAAC
AATATGAATGTATTGGTTGTCGAGAACAATCAACAAGGAGAAATACAACT
TTCAACTCATGGACCAGCTCTAGATTTACTAAACAAGAGAAAACTGTCCA
GATGAATATCGATTTTATAAGAGCAAAGAGTTATTCCAATCGAACGTCTT
GCTCAAATGATCATTGAAGATTATGGTGGGCAATCTGTCACTTTATTATG
TGTCTTAAAGGGTGGATTTCGATTTTGTCAAGACATTATGGCCACCGTGG
AAAGGTTGAATACAAGTGCAGATTCCTGATGAACACCAGAGATATGATCC
GGACCTTTTCGTTATTCCAAAACATTACAGAGATAGCATCGATTACGTTT
TGATACCACATGGTTTGCTTTTGGACAGATGATGAGTAAAAGTAACTGTA
TCTATCATGTCATTGTTTTGAATGCACATGGCAGACAGAAGTATGATACT
TCTAAAACATCTCAAGAAGGATAAGATTACAACGAATACTTCAGAGATCT
CAATACTTAGGGTTTGATATTCCTGATACTTGGATCACCGGCTATGGTGG
ATTTTCTGGTTTTGAAACGTAATAAGAAGAATACAACTGGATACCGACCT
GACTGATTGCATAGACTCTGGCAGAACCATGAAGTTACTGTTGGCAAAAT
TATCGGATGAAAAACCTAAATCGTTGAAAACAATATGAATGTATTGGTTG
TCGAGAACAATCAACAAGGAGAAATACAACTTTCAACTCATGGACCAGCT
CTAGATTTACTAAACAAGAGAAAACTGTCCAGATGAATATCGATTTTATA
AGAGCAAAGAGTTATTCCAATCGAACGTCTTGCTCAAATGATCATTGAAG
ATTATGGTGGGCAATCTGTCACTTTATTATGTGTCTTAAAGGGTGGATTT
CGATTTTGTCAAGACATTATGGCCACCGTGGAAAGGTTGAATACAAGTGC
AGATTCCTGATGAACACCAGAGATATGATCCGGACCTTTTCGTTATTCCA
AAACATTACAGAGATAGCATCGATTACGTTTTGATACCACATGGTTTGCT
TTTGGACAGATGATGAGTAAAAGTAACTGTATCTATCATGTCATTGTTTT
GAATGCACATGGCAGACAGAAGTATGATACTTCTAAAACATCTCAAGAAG
GATAAGATTACAACGAATACTTCAGAGATCTCAATACTTAGGGTTTGATA
TTCCTGATACTTGGATCACCGGCTATGGTGGATTTTCTGGTTTTGAAACG
TAATAAGAAGAATACAACTGGATACCGACCTGACTGATTGCATAGACTCT
GGCAGAACCATGAAGTTACTGTTGGCAAAATTATCGGATGAAAAACCTAA
ATCGTTGAAAACAATATGAATGTATTGGTTGTCGAGAACAATCAACAAGG
AGAAATACAACTTTCAACTCATGGACCAGCTCTAGATTTACTAAACAAGA
GAAAACTGTCCAGATGAATATCGATTTTATAAGAGCAAAGAGTTATTCCA
ATCGAACGTCTTGCTCAAATGATCATTGAAGATTATGGTGGGCAATCTGT
CACTTTATTATGTGTCTTAAAGGGTGGATTTCGATTTTGTCAAGACATTA
TGGCCACCGTGGAAAGGTTGAATACAAGTGCAGATTCCTGATGAACACCA
GAGATATGATCCGGACCTTTTCGTTATTCCAAAACATTACAGAGATAGCA
TCGATTACGTTTTGATACCACATGGTTTGCTTTTGGACAGATGATGAGTA
AAAGTAACTGTATCTATCATGTCATTGTTTTGAATGCACATGGCAGACAG
AAGTATGATACTTCTAAAACATCTCAAGAAGGATAAGATTACAACGAATA
CTTCAGAGATCTCAATACTTAGGGTTTGATATTCCTGATACTTGGATCAC
CGGCTATGGTGGATTTTCTGGTTTTGAAACGTAATAAGAAGAATACAACT
GGATACCGACCTGACTGATTGCATAGACTCTGGCAGAACCATGAAGTTAC
TGTTGGCAAAATTATCGGATGAAAAACCTAAATCGTTGAAAACAATATGA
ATGTATTGGTTGTCGAGAACAATCAACAAGGAGAAATACAACTTTCAACT
CATGGACCAGCTCTAGATTTACTAAACAAGAGAAAACTGTCCAGATGAAT
ATCGATTTTATAAGAGCAAAGAGTTATTCCAATCGAACGTCTTGCTCAAA
TGATCATTGAAGATTATGGTGGGCAATCTGTCACTTTATTATGTGTCTTA
AAGGGTGGATTTCGATTTTGTCAAGACATTATGGCCACCGTGGAAAGGTT
GAATACAAGTGCAGATTCCTGATGAACACCAGAGATATGATCCGGACCTT
TTCGTTATTCCAAAACATTACAGAGATAGCATCGATTACGTTTTGATACC
ACATGGTTTGCTTTTGGACAGATGATGAGTAAAAGTAACTGTATCTATCA
TGTCATTGTTTTGAATGCACATGGCAGACAGAAGTATGATACTTCTAAAA
CATCTCAAGAAGGATAAGATTACAACGAATACTTCAGAGATCTCAATACT
TAGGGTTTGATATTCCTGATACTTGGATCACCGGCTATGGTGGATTTTCT
GGTTTTGAAACGTAATAAGAAGAATACAACTGGATACCGACCTGACTGAT
TGCATAGACTCTGGCAGAACCATGAAGTTACTGTTGGCAAAATTATCGGA
TGAAAAACCTAAATCGTTGAAAACAATATGAATGTATTGGTTGTCGAGAA
CAATCAACAAGGAGAAATACAACTTTCAACTCATGGACCAGCTCTAGATT
TACTAAACAAGAGAAAACTGTCCAGATGAATATCGATTTTATAAGAGCAA
AGAGTTATTCCAATCGAACGTCTTGCTCAAATGATCATTGAAGATTATGG
TGGGCAATCTGTCACTTTATTATGTGTCTTAAAGGGTGGATTTCGATTTT
GTCAAGACATTATGGCCACCGTGGAAAGGTTGAATACAAGTGCAGATTCC
TGATGAACACCAGAGATATGATCCGGACCTTTTCGTTATTCCAAAACATT
ACAGAGATAGCATCGATTACGTTTTGATACCACATGGTTTGCTTTTGGAC
AGATGATGAGTAAAAGTAACTGTATCTATCATGTCATTGTTTTGAATGCA
CATGGCAGACAGAAGTATGATACTTCTAAAACATCTCAAGAAGGATAAGA
TTACAACGAATACTTCAGAGATCTCAATACTTAGGGTTTGATATTCCTGA
TACTTGGATCACCGGCTATGGTGGATTTTCTGGTTTTGAAACGTAATAAG
AAGAATACAACTGGATACCGACCTGACTGATTGCATAGACTCTGGCAGAA
CCATGAAGTTACTGTTGGCAAAATTATCGGATGAAAAACCTAAATCGTTG
AAAACAATATGAATGTATTGGTTGTCGAGAACAATCAACAAGGAGAAATA
CAACTTTCAACTCATGGACCAGCTCTAGATTTACTAAACAAGAGAAAACT
GTCCAGATGAATATCGATTTTATAAGAGCAAAGAGTTATTCCAATCGAAC
GTCTTGCTCAAATGATCATTGAAGATTATGGTGGGCAATCTGTCACTTTA
TTATGTGTCTTAAAGGGTGGATTTCGATTTTGTCAAGACATTATGGCCAC
CGTGGAAAGGTTGAATACAAGTGCAGATTCCTGATGAACACCAGAGATAT
GATCCGGACCTTTTCGTTATTCCAAAACATTACAGAGATAGCATCGATTA
CGTTTTGATACCACATGGTTTGCTTTTGGACAGATGATGAGTAAAAGTAA
CTGTATCTATCATGTCATTGTTTTGAATGCACATGGCAGACAGAAGTATG
ATACTTCTAAAACATCTCAAGAAGGATAAGATTACAACGAATACTTCAGA
GATCTCAATACTTAGGGTTTGATATTCCTGATACTTGGATCACCGGCTAT
GGTGGATTTTCTGGTTTTGAAACGTAATAAGAAGAATACAACTGGATACC
GACCTGACTGATTGCATAGACTCTGGCAGAACCATGAAGTTACTGTTGGC
AAAATTATCGGATGAAAAACCTAAATCGTTGAAAACAATATGAATGTATT
GGTTGTCGAGAACAATCAACAAGGAGAAATACAACTTTCAACTCATGGAC
CAGCTCTAGATTTACTAAACAAGAGAAAACTGTCCAGATGAATATCGATT
TTATAAGAGCAAAGAGTTATTCCAATCGAACGTCTTGCTCAAATGATCAT
TGAAGATTATGGTGGGCAATCTGTCACTTTATTATGTGTCTTAAAGGGTG
GATTTCGATTTTGTCAAGACATTATGGCCACCGTGGAAAGGTTGAATACA
AGTGCAGATTCCTGATGAACACCAGAGATATGATCCGGACCTTTTCGTTA
TTCCAAAACATTACAGAGATAGCATCGATTACGTTTTGATACCACATGGT
TTGCTTTTGGACAGATGATGAGTAAAAGTAACTGTATCTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010493XLOC_010493Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018749-proteinTCONS_00018749-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018749-exon-sc0000305-1575043694:349125..349303TCONS_00018749-exon-sc0000305-1575043694:349125..349303Clytia hemisphaericaexon
TCONS_00018749-exon-sc0000305-1575043694:348694..348734TCONS_00018749-exon-sc0000305-1575043694:348694..348734Clytia hemisphaericaexon
TCONS_00018749-exon-sc0000305-1575043694:348341..348447TCONS_00018749-exon-sc0000305-1575043694:348341..348447Clytia hemisphaericaexon
TCONS_00018749-exon-sc0000305-1575043694:346842..346975TCONS_00018749-exon-sc0000305-1575043694:346842..346975Clytia hemisphaericaexon
TCONS_00018749-exon-sc0000305-1575043694:346366..346415TCONS_00018749-exon-sc0000305-1575043694:346366..346415Clytia hemisphaericaexon
TCONS_00018749-exon-sc0000305-1575043694:345216..345278TCONS_00018749-exon-sc0000305-1575043694:345216..345278Clytia hemisphaericaexon
TCONS_00018749-exon-sc0000305-1575043694:345026..345043TCONS_00018749-exon-sc0000305-1575043694:345026..345043Clytia hemisphaericaexon
TCONS_00018749-exon-sc0000305-1575043694:344532..344614TCONS_00018749-exon-sc0000305-1575043694:344532..344614Clytia hemisphaericaexon
TCONS_00018749-exon-sc0000305-1575043694:343364..343413TCONS_00018749-exon-sc0000305-1575043694:343364..343413Clytia hemisphaericaexon
TCONS_00018749-exon-sc0000305-1575043694:343075..343124TCONS_00018749-exon-sc0000305-1575043694:343075..343124Clytia hemisphaericaexon
TCONS_00018749-exon-sc0000305-1575043694:342173..342202TCONS_00018749-exon-sc0000305-1575043694:342173..342202Clytia hemisphaericaexon
TCONS_00018749-exon-sc0000305-1575043694:340810..341233TCONS_00018749-exon-sc0000305-1575043694:340810..341233Clytia hemisphaericaexon
TCONS_00018749-exon-sc0000305-1510915933:349125..349303TCONS_00018749-exon-sc0000305-1510915933:349125..349303Clytia hemisphaericaexon
TCONS_00018749-exon-sc0000305-1510915933:348694..348734TCONS_00018749-exon-sc0000305-1510915933:348694..348734Clytia hemisphaericaexon
TCONS_00018749-exon-sc0000305-1510915933:348341..348447TCONS_00018749-exon-sc0000305-1510915933:348341..348447Clytia hemisphaericaexon
TCONS_00018749-exon-sc0000305-1510915933:346842..346975TCONS_00018749-exon-sc0000305-1510915933:346842..346975Clytia hemisphaericaexon
TCONS_00018749-exon-sc0000305-1510915933:346366..346415TCONS_00018749-exon-sc0000305-1510915933:346366..346415Clytia hemisphaericaexon
TCONS_00018749-exon-sc0000305-1510915933:345216..345278TCONS_00018749-exon-sc0000305-1510915933:345216..345278Clytia hemisphaericaexon
TCONS_00018749-exon-sc0000305-1510915933:345026..345043TCONS_00018749-exon-sc0000305-1510915933:345026..345043Clytia hemisphaericaexon
TCONS_00018749-exon-sc0000305-1510915933:344532..344614TCONS_00018749-exon-sc0000305-1510915933:344532..344614Clytia hemisphaericaexon
TCONS_00018749-exon-sc0000305-1510915933:343364..343413TCONS_00018749-exon-sc0000305-1510915933:343364..343413Clytia hemisphaericaexon
TCONS_00018749-exon-sc0000305-1510915933:343075..343124TCONS_00018749-exon-sc0000305-1510915933:343075..343124Clytia hemisphaericaexon
TCONS_00018749-exon-sc0000305-1510915933:342173..342202TCONS_00018749-exon-sc0000305-1510915933:342173..342202Clytia hemisphaericaexon
TCONS_00018749-exon-sc0000305-1510915933:340810..341233TCONS_00018749-exon-sc0000305-1510915933:340810..341233Clytia hemisphaericaexon
TCONS_00018749-exon-sc0000305-1491911889:349125..349303TCONS_00018749-exon-sc0000305-1491911889:349125..349303Clytia hemisphaericaexon
TCONS_00018749-exon-sc0000305-1491911889:348694..348734TCONS_00018749-exon-sc0000305-1491911889:348694..348734Clytia hemisphaericaexon
TCONS_00018749-exon-sc0000305-1491911889:348341..348447TCONS_00018749-exon-sc0000305-1491911889:348341..348447Clytia hemisphaericaexon
TCONS_00018749-exon-sc0000305-1491911889:346842..346975TCONS_00018749-exon-sc0000305-1491911889:346842..346975Clytia hemisphaericaexon
TCONS_00018749-exon-sc0000305-1491911889:346366..346415TCONS_00018749-exon-sc0000305-1491911889:346366..346415Clytia hemisphaericaexon
TCONS_00018749-exon-sc0000305-1491911889:345216..345278TCONS_00018749-exon-sc0000305-1491911889:345216..345278Clytia hemisphaericaexon
TCONS_00018749-exon-sc0000305-1491911889:345026..345043TCONS_00018749-exon-sc0000305-1491911889:345026..345043Clytia hemisphaericaexon
TCONS_00018749-exon-sc0000305-1491911889:344532..344614TCONS_00018749-exon-sc0000305-1491911889:344532..344614Clytia hemisphaericaexon
TCONS_00018749-exon-sc0000305-1491911889:343364..343413TCONS_00018749-exon-sc0000305-1491911889:343364..343413Clytia hemisphaericaexon
TCONS_00018749-exon-sc0000305-1491911889:343075..343124TCONS_00018749-exon-sc0000305-1491911889:343075..343124Clytia hemisphaericaexon
TCONS_00018749-exon-sc0000305-1491911889:342173..342202TCONS_00018749-exon-sc0000305-1491911889:342173..342202Clytia hemisphaericaexon
TCONS_00018749-exon-sc0000305-1491911889:340810..341233TCONS_00018749-exon-sc0000305-1491911889:340810..341233Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000305supercontigsc0000305:340810..349303 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.80855	9.08756	3.34748	1.69529	22.9837	17.8655	11.8055	12.9779	12.0465	8.42286	6.90683	8.70992	12.6303	11.7458	9.3222	11.7634	30.628	32.0885	5.80494	5.57147	20.9174	20.0775	32.1038	29.0782	21.7342	17.6642	31.0959	17.8148	14.2068	19.4697
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000836PRibTrfase_dom
IPR029057PRTase-like
Vocabulary: Biological Process
TermDefinition
GO:0009116nucleoside metabolic process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009116 nucleoside metabolic process
Blast
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BLAST of TCONS_00018749 vs. Swiss-Prot (Human)
Match: PRDC1 (Phosphoribosyltransferase domain-containing protein 1 OS=Homo sapiens GN=PRTFDC1 PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.046e-64
Identity = 99/211 (46.92%), Postives = 148/211 (70.14%), Query Frame = 2 
Query:  215 IYIPDEHQRYDPDLFVIPKHYRDSIDYVLIPHGLLLDRIERLAQMIIEDYGGQSVTLLCVLKGGFRFCQDIMATVERLNTSAEKTVQMNIDFIRAKSYSNNQQ-GEIQLSTHGPALDLLNKNVLVVEDCIDSGRTMKLLLAKLSDEKPKSLKTICLVLKRNKKNTTGYRPDYLGFDIPDTWITGYGGFDYNEYFRDLNHVIVLNAHGRQKY 844
            + I D+   YD +LF  P+HY   ++YVLIPHG+++DRIERLA+ I++D G   + +LCVLKGG++FC D++  ++ ++ ++++ V M +DFIR KSY N+Q  GE+Q+        L  KNVL+VED + +GRTMK LL+ +   KP  +K   L++KR  + + G+RPDY GF+IP+ ++ GY   DYNEYFRDLNH+ V+N HG++KY
Sbjct:   15 VVIMDDWPGYDLNLFTYPQHYYGDLEYVLIPHGIIVDRIERLAKDIMKDIGYSDIMVLCVLKGGYKFCADLVEHLKNISRNSDRFVSMKVDFIRLKSYRNDQSMGEMQIIGGDDLSTLAGKNVLIVEDVVGTGRTMKALLSNIEKYKPNMIKVASLLVKRTSR-SDGFRPDYAGFEIPNLFVVGY-ALDYNEYFRDLNHICVINEHGKEKY 223
The following BLAST results are available for this feature:
BLAST of TCONS_00018749 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PRDC12.046e-6446.92Phosphoribosyltransferase domain-containing protei... [more]
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