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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018714 ID=TCONS_00018714|Name=TCONS_00018714|organism=Clytia hemisphaerica|type=transcript|length=869bp
ATTCTGTAAAGTTGaactaaaacacctgatttcatagataaatggacaaa
aataaacaaaaatggtgaaaataagaacatgttaagaacatttcaggctt
ccaaaattttggatgctttaaaaaaaaaatacgtaTACCAATcacataaa
aaaatatcaactgaAACAATTAGTATTCAAAATACTTCttctaaaaactt
attcaaCTACTAGATTTTAACATCtagaataaatttgaaaatacagCATA
AACCACCAATGAAATGAAGACAAGATATTGAGTCACGTGAACAACCATTG
AATCTGAGCATGCGCAGTCGTATTGAATTTTTCCATCACCTTGTCCATAT
TTCTCTTGTTGACAAGCGTACCAACAATGAGTCTCTGGGAAAGGGCATCC
ACTGAAAGCTTTCAGTAAAACTTCTTTCGTTTCTAAGCAGGTCACGTGTT
GATAATTATCATAATTAGGTAATTTCAAACAACGTTTCTTGTTGTGATCA
ATCTTGTGTTTACACCAATTCTGACTAACTTCTTCACATTGACATTGTGG
ACGGACCTCAGGGAAAAACCCTGAATTAGTAAACCCCTTTTGACACTTTT
CGTACCAGCAATATCCTGTCATTGAATCGCAAGtgtctttcttttttgat
aaatcttCAATGGTTTTCTTACGCAAGCAAGTCACCTTTTGGTAGTGCAG
ATAAAAAGCGACTGATTTGCATGATTCTTCGTTTTCTTGCTCTTTGGTGC
ACGACTTGTCATCTTGCGCATGCGTAAACATGACCAAAAGGAACACGTGT
GACAAAAGGGTGAAATTgacattcatttttttcatctaaaatcATAACAT
GTTTTATAATGATAAGGGC Run BLAST on NCBI protein sequence of TCONS_00018714-protein >TCONS_00018714-protein ID=TCONS_00018714-protein|Name=TCONS_00018714-protein|organism=Clytia hemisphaerica|type=polypeptide|length=203bp
MKKMNVNFTLLSHVFLLVMFTHAQDDKSCTKEQENEESCKSVAFYLHYQK
VTCLRKKTIEDLSKKKDTCDSMTGYCWYEKCQKGFTNSGFFPEVRPQCQC
EEVSQNWCKHKIDHNKKRCLKLPNYDNYQHVTCLETKEVLLKAFSGCPFP
ETHCWYACQQEKYGQGDGKIQYDCACSDSMVVHVTQYLVFISLVVYAVFS
NLF Run BLAST on NCBI transcript from alignment at sc0000304:206197..207065 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018714 ID=TCONS_00018714|Name=TCONS_00018714|organism=Clytia hemisphaerica|type=transcript|length=869bp|location=Sequence derived from alignment at sc0000304:206197..207065 (Clytia hemisphaerica)
GCCCTTATCATTATAAAACATGTTATgattttagatgaaaaaaatgaatg
tcAATTTCACCCTTTTGTCACACGTGTTCCTTTTGGTCATGTTTACGCAT
GCGCAAGATGACAAGTCGTGCACCAAAGAGCAAGAAAACGAAGAATCATG
CAAATCAGTCGCTTTTTATCTGCACTACCAAAAGGTGACTTGCTTGCGTA
AGAAAACCATTGaagatttatcaaaaaagaaagacaCTTGCGATTCAATG
ACAGGATATTGCTGGTACGAAAAGTGTCAAAAGGGGTTTACTAATTCAGG
GTTTTTCCCTGAGGTCCGTCCACAATGTCAATGTGAAGAAGTTAGTCAGA
ATTGGTGTAAACACAAGATTGATCACAACAAGAAACGTTGTTTGAAATTA
CCTAATTATGATAATTATCAACACGTGACCTGCTTAGAAACGAAAGAAGT
TTTACTGAAAGCTTTCAGTGGATGCCCTTTCCCAGAGACTCATTGTTGGT
ACGCTTGTCAACAAGAGAAATATGGACAAGGTGATGGAAAAATTCAATAC
GACTGCGCATGCTCAGATTCAATGGTTGTTCACGTGACTCAATATCTTGT
CTTCATTTCATTGGTGGTTTATGctgtattttcaaatttattctaGATGT
TAAAATCTAGTAGttgaataagtttttagaaGAAGTATTTTGAATACTAA
TTGTTtcagttgatatttttttatgtgATTGGTAtacgtatttttttttt
aaagcatccaaaattttggaagcctgaaatgttcttaacatgttcttatt
ttcaccatttttgtttatttttgtccatttatctatgaaatcaggtgttt
tagttCAACTTTACAGAAT Coding sequence (CDS) from alignment at sc0000304:206197..207065 >TCONS_00018714 ID=TCONS_00018714|Name=TCONS_00018714|organism=Clytia hemisphaerica|type=CDS|length=612bp|location=Sequence derived from alignment at sc0000304:206197..207065 (Clytia hemisphaerica)
atgaaaaaaatgaatgtcAATTTCACCCTTTTGTCACACGTGTTCCTTTT
GGTCATGTTTACGCATGCGCAAGATGACAAGTCGTGCACCAAAGAGCAAG
AAAACGAAGAATCATGCAAATCAGTCGCTTTTTATCTGCACTACCAAAAG
GTGACTTGCTTGCGTAAGAAAACCATTGaagatttatcaaaaaagaaaga
caCTTGCGATTCAATGACAGGATATTGCTGGTACGAAAAGTGTCAAAAGG
GGTTTACTAATTCAGGGTTTTTCCCTGAGGTCCGTCCACAATGTCAATGT
GAAGAAGTTAGTCAGAATTGGTGTAAACACAAGATTGATCACAACAAGAA
ACGTTGTTTGAAATTACCTAATTATGATAATTATCAACACGTGACCTGCT
TAGAAACGAAAGAAGTTTTACTGAAAGCTTTCAGTGGATGCCCTTTCCCA
GAGACTCATTGTTGGTACGCTTGTCAACAAGAGAAATATGGACAAGGTGA
TGGAAAAATTCAATACGACTGCGCATGCTCAGATTCAATGGTTGTTCACG
TGACTCAATATCTTGTCTTCATTTCATTGGTGGTTTATGctgtattttca
aatttattctaG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018714-exon-sc0000304-1491911889:206197..207065 | TCONS_00018714-exon-sc0000304-1491911889:206197..207065 | Clytia hemisphaerica | exon |
| TCONS_00018714-exon-sc0000304-1510915933:206197..207065 | TCONS_00018714-exon-sc0000304-1510915933:206197..207065 | Clytia hemisphaerica | exon |
| TCONS_00018714-exon-sc0000304-1575043694:206197..207065 | TCONS_00018714-exon-sc0000304-1575043694:206197..207065 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000304 | supercontig | sc0000304:206197..207065 . |
Blast
The following BLAST results are available for this feature:
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