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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018713 ID=TCONS_00018713|Name=TCONS_00018713|organism=Clytia hemisphaerica|type=transcript|length=1064bp
CTCTAATTTTCCAAATAGTTCAGGAATAATTTCTTCGATTTCTgtaatta
aaaaattgtttcaagATGTCTCATATATACAAACTgtacaaaaagataaa
aaggctttaatttttacaattttatagTGTCAAGTGTCAATATTCAAATC
TCTGGGTTATTTCTCAGGGTCATCCTAACAGAGAAATCTGCAATTTCCCT
CGAGTGAGTTTTTTTTTAGTGTTATATCAAAGTCAACAAAACCATTATAA
CTTTCTTGCCGTCGATACAGCGCCATAATGTCATTTTAAAAGTAAGTGAA
TATGCTATCTCATAAAGAAAGCTAGAAAAGTTTCTTTACCAAAAACCCCA
TCAGGAGGACAAGCAATTGAACCAACAAACTTGGTTTGGTTAGAAACCCT
GCATTGATATCACAAGAACAGTCTTCGCGGACGAAGCCGGACTCCTCGTG
ATGTTTGATCGACTGGCATGGAACCCAACAATGTGTTTGAGAAGATGATT
GGCACCGCGTAAAATGGTTGATCGAACTCATACAGGTCACCTTTTGAGCA
CTGTTGTATCTTTCAAGTTTCACGCACTGTGTTTTTCCTACATCGATTTG
ATCTCTGCAATAACTTCTACTCATCTCGACACATCTGCATTGTTGACGCA
CATCTGGCTCGAATCCGTTGTCTGTAAGCCTTAGTTGGCACTCAGGGTAG
TAACACATCTTGGAAGGATTTCTTGAGGCATCATGCCTGCATTCATAATC
TCCTTTACCGATAATTCGAACTGTTTCTCTTTTGATGCATTTCACTGTTT
GGTATTGATTGTAGAAACGAAGGACGTCGCATTTCTCATCATTCTCCACA
GTGCAGGGTTCGAGAAGGGTGACTGTCGCACCGAATATCTGATTGGCCAG
TGTTGCGATCACCAGGAAAACTTGAATGTTGTGTCTCACCATTGTGTATT
CTTTTATAatgtgtttttgtatttttctgtgttttttcgtttctctgaaa
ataaaatgaacatAGTTCAAATACCGTATtgcttcaaataaacgccccca
ggcgtttattcaat Run BLAST on NCBI protein sequence of TCONS_00018713-protein >TCONS_00018713-protein ID=TCONS_00018713-protein|Name=TCONS_00018713-protein|organism=Clytia hemisphaerica|type=polypeptide|length=206bp
MVRHNIQVFLVIATLANQIFGATVTLLEPCTVENDEKCDVLRFYNQYQTV
KCIKRETVRIIGKGDYECRHDASRNPSKMCYYPECQLRLTDNGFEPDVRQ
QCRCVEMSRSYCRDQIDVGKTQCVKLERYNSAQKVTCMSSINHFTRCQSS
SQTHCWVPCQSIKHHEESGFVREDCSCDINAGFLTKPSLLVQLLVLLMGF
LVKKLF Run BLAST on NCBI transcript from alignment at sc0000304:203597..204660 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018713 ID=TCONS_00018713|Name=TCONS_00018713|organism=Clytia hemisphaerica|type=transcript|length=1064bp|location=Sequence derived from alignment at sc0000304:203597..204660 (Clytia hemisphaerica)
attgaataaacgcctgggggcgtttatttgaagcaATACGGTATTTGAAC
Tatgttcattttattttcagagaaacgaaaaaacacagaaaaatacaaaa
acacatTATAAAAGAATACACAATGGTGAGACACAACATTCAAGTTTTCC
TGGTGATCGCAACACTGGCCAATCAGATATTCGGTGCGACAGTCACCCTT
CTCGAACCCTGCACTGTGGAGAATGATGAGAAATGCGACGTCCTTCGTTT
CTACAATCAATACCAAACAGTGAAATGCATCAAAAGAGAAACAGTTCGAA
TTATCGGTAAAGGAGATTATGAATGCAGGCATGATGCCTCAAGAAATCCT
TCCAAGATGTGTTACTACCCTGAGTGCCAACTAAGGCTTACAGACAACGG
ATTCGAGCCAGATGTGCGTCAACAATGCAGATGTGTCGAGATGAGTAGAA
GTTATTGCAGAGATCAAATCGATGTAGGAAAAACACAGTGCGTGAAACTT
GAAAGATACAACAGTGCTCAAAAGGTGACCTGTATGAGTTCGATCAACCA
TTTTACGCGGTGCCAATCATCTTCTCAAACACATTGTTGGGTTCCATGCC
AGTCGATCAAACATCACGAGGAGTCCGGCTTCGTCCGCGAAGACTGTTCT
TGTGATATCAATGCAGGGTTTCTAACCAAACCAAGTTTGTTGGTTCAATT
GCTTGTCCTCCTGATGGGGTTTTTGGTAAAGAAACTTTTCTAGCTTTCTT
TATGAGATAGCATATTCACTTACTTTTAAAATGACATTATGGCGCTGTAT
CGACGGCAAGAAAGTTATAATGGTTTTGTTGACTTTGATATAACACTAAA
AAAAAACTCACTCGAGGGAAATTGCAGATTTCTCTGTTAGGATGACCCTG
AGAAATAACCCAGAGATTTGAATATTGACACTTGACActataaaattgta
aaaattaaagcctttttatctttttgtacAGTTTGTATATATGAGACATc
ttgaaacaattttttaattacAGAAATCGAAGAAATTATTCCTGAACTAT
TTGGAAAATTAGAG Coding sequence (CDS) from alignment at sc0000304:203597..204660 >TCONS_00018713 ID=TCONS_00018713|Name=TCONS_00018713|organism=Clytia hemisphaerica|type=CDS|length=621bp|location=Sequence derived from alignment at sc0000304:203597..204660 (Clytia hemisphaerica)
ATGGTGAGACACAACATTCAAGTTTTCCTGGTGATCGCAACACTGGCCAA
TCAGATATTCGGTGCGACAGTCACCCTTCTCGAACCCTGCACTGTGGAGA
ATGATGAGAAATGCGACGTCCTTCGTTTCTACAATCAATACCAAACAGTG
AAATGCATCAAAAGAGAAACAGTTCGAATTATCGGTAAAGGAGATTATGA
ATGCAGGCATGATGCCTCAAGAAATCCTTCCAAGATGTGTTACTACCCTG
AGTGCCAACTAAGGCTTACAGACAACGGATTCGAGCCAGATGTGCGTCAA
CAATGCAGATGTGTCGAGATGAGTAGAAGTTATTGCAGAGATCAAATCGA
TGTAGGAAAAACACAGTGCGTGAAACTTGAAAGATACAACAGTGCTCAAA
AGGTGACCTGTATGAGTTCGATCAACCATTTTACGCGGTGCCAATCATCT
TCTCAAACACATTGTTGGGTTCCATGCCAGTCGATCAAACATCACGAGGA
GTCCGGCTTCGTCCGCGAAGACTGTTCTTGTGATATCAATGCAGGGTTTC
TAACCAAACCAAGTTTGTTGGTTCAATTGCTTGTCCTCCTGATGGGGTTT
TTGGTAAAGAAACTTTTCTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018713-exon-sc0000304-1491911889:203597..204660 | TCONS_00018713-exon-sc0000304-1491911889:203597..204660 | Clytia hemisphaerica | exon |
| TCONS_00018713-exon-sc0000304-1510915933:203597..204660 | TCONS_00018713-exon-sc0000304-1510915933:203597..204660 | Clytia hemisphaerica | exon |
| TCONS_00018713-exon-sc0000304-1575043694:203597..204660 | TCONS_00018713-exon-sc0000304-1575043694:203597..204660 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000304 | supercontig | sc0000304:203597..204660 . |
Blast
The following BLAST results are available for this feature:
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