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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018693 ID=TCONS_00018693|Name=TCONS_00018693|organism=Clytia hemisphaerica|type=transcript|length=256bp
GGAGAATCGTATTCATCCTCTTCGAATGTTCTGAAGACGCATGATGGCCA
AATGTACTCCTCTTCTTCCTATTGGCCAGAAATGATGTAATGGTTACAAT
AGAGACATCTCATTGGTTAAAAATGATCAATACAATAAGAATTCAGTATC
GCCGATGACGTCCACGACAGCTCCAGCTTTCTTGTTGGGAATGTGTCGGC
AACTGTTGTAATCAACAATCTTCAAGTCACGGGCGTTTGCAAATCGAATG
TTGGTG Run BLAST on NCBI transcript from alignment at sc0000304:267698..270952- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018693 ID=TCONS_00018693|Name=TCONS_00018693|organism=Clytia hemisphaerica|type=transcript|length=3255bp|location=Sequence derived from alignment at sc0000304:267698..270952- (Clytia hemisphaerica)
GGAGAATCGTATTCATCCTCTTCGAATGTTCTGAAGACGCATGATGGCCA
AATGTACTCCTCTTCTTCCTATTGGCCAGAAATGATGTAATGGTTACAAT
AGAGACATCTCATTGGTTAAAAATGATCAATACAATAAGGTAGGTATGTA
GGTGGGAGGTTCTCCGCTTGTGTAATTAGTCCAAGATATTTAAGGATCTA
TTCAAGGCCTTTTAAGGATATATAAGATAAGTTATTCAAGGATATATAGG
ACAATGTGGCCCTAAAATGACTATTTGGAAAGCTGCTTCCCCAGTTTGTA
CTACATTTCCACCCCGATAATGACTAATTTGTCATGCAATGAAAAACCTA
AAAGAAGTGTCATCGTGCTAAATTAGATTGCGTCCTTTTGAATTTATCTC
CTTTATTTGTTATCTCCTTAATACTGAAAGGTCACTTACCTCAGAGTATA
ATCGTTCGTCAGTTTCTACCATGACATCTTGAGCGCCGATGGTGGTTTTC
TTGCGCATAGCTGCGTAATCACTCTGTTAATGAAAATTATAAATAGGAAG
AGAAATAAAGAACTAGTTTACAATCGCTACACGGTGTTTGATGCTGGTGC
AATCTTCAGGTTATGCAGTGTATTGTAGTTTTTATTTCAATAATTCATGA
TATTCATGACGTAATGTTTTCTACGGAAATACCCCGGTTTTAGCCAGTAG
TGGTAAATTTGAACTAGAAAAAGGTTCTATAAAATTTGCTACCACTGGCA
AAAACCCGGGTCCTTCCGTAGAAAATATTATGTCATGAATATCATGAATT
GAAAGCATGAAACACCGCGTAGCAATCGTAAGTTATTTCTTTTTTCTCGA
TATTTCGCTCGAATTTGTTCGAATTTTCTTGAGCACTTTGTGATTCTATT
TATTTCACTGTAAATAGGAAGACATGGTTTAGTTTTACTGAAAGTTCGCA
CATTTGTTTCTTTTGGCTTTGATCTGCTTGGTAAAAATGTTTTTCATTTG
AATCCACTTTGTGAGGAAACAAAAAAAAGAAAATAAAGAAGGTCATCACT
CTTACCGAAAGCCATTTGTGTTCTAAAGCTGCAGATGCAGTCATTCTTGA
TCTAAAGGAGGAGAAGGTGATTTGAAAGGTTAATACTCTCTGTATGTTAA
CACTCGTTTCCTTTGGAAAAACTGAGCGAAACATTACAGTTTATTGTCAC
TTATTTGAAAAGGCACAAGTGGAAATTATTTTGTTCACAGACTGGGGCGA
GATAAGAAAAAGTGCTCTGGATAATGGAAATAAACCAGATTCAGAAATTT
TAGTACTTTTCAAATTAACTGTCAGTAAAATAACTTTTGACAGAGTTTGT
TTTAGATTGTGATTTTGTGCTCGTTGGAAAGATAATCGTGAGTAGGATAT
CATTAAGCTTAGTCTGACTTGTTGGTGTTAAGGATTAGATGTCTACTTAC
TCTGGCGCCCTCACGAAGAGTTTTTTAATGAAATCTTTAGCTTCTGCTGT
GATCTCAGCGAATGCGCTTTCGTCGAATTGCCACTTGACTTTTTGTACAC
ATTTGACGACTTTATCTTCGTCTTCGTAGAAGAAAGGTGAAATTCCAGAT
AACCTATAATTCAATCAATAGAAGTTTTTTTAGATCTGTCCATAGATTTA
TAAAGCCCGAAGGGCTAGATGATGTACTTTTGCTGAAAGGTGTGTCATGG
TTTTAGGTAGGAAATCCTAGTCACATTACAATAGACTTTCAGCGCTTGAC
CTTTCTGATTGAAGCTTCGCGGGATTTCAAAAACAATAGCAACAATATTT
TTTCCGATATTCACTTTTTTTTGCCCGCGATGGCTTAAAGCACGACATCT
AGCCCTTCGGGCTTTATAATACTATAGATCTGCCTTCATGGAATCAAACG
TTCGAATTTCATAATGTTATGCAACTTGGTCTATACTATTCTTTCATAAA
GGAAAATCAAAATAAGTTTATATTGTCTGAAGTGTGAATGAGTTGTATTT
TGCTGTCCCTCCTTTTTCGCACAGTGATCTTTCCAATCAACAGGTACTCT
AGAATAGTGAACAAAGTTTCCAACCCAGTTCCAACAAAACCTTTAAAAGG
CGGACATTTTGTGCACTATTCTTGAGTACTTGTTAAGGCCTGTTTCTGGG
CACCTTCTTCTTAATCCAAAACTCCTTATTAAAGAGCTGATTGTCAAAAT
ATATCATGCTCGTTTAGTCGCCAGTTTTTTTGGTAAAATATTTTCAAATC
AGTCTCTCTTTTTCTTTGCTTCGTAATGGTTGAAAGAGAAAGTAGTCGAT
CCTTTGGAGGACAATACACCTTTTCGACCGTAGCCACCAATTACCGCGCG
GGCATTTTTTGTCCGCTTTATCCCACTAAAACCGTCCTTTTTTTCGCACC
AATAGACAATAGAAAAATGCGTCAAAAAGGATTGGGACGGTATTAGTGGG
ATAAAGCAGACAAAAAAAATGTCCCCGCGACTACGGTCGAAAAGGCGTAT
ATTTAACGTGTTTTTTTTTTACTTGTGTGATGAAGGGTTTCAGTTTTTCA
TATAAAATGATTTGTACTTACATGCAGTAAGCGAGTACTCCTATAGTCCA
CATGTCAGATCCTGGAAGGACTGGTTCGAATTGCAGCATTTCAGGGGCTA
GAAAATATGGAACAGCAGTGTTATTAAATTGCCTTGGCTCGATTTGTGTA
TCAAAGTTTCGGATGATTGGCTTTACGAGCATTGTCAATCTTATATTGAT
AATCCTTTACATTGCTTCAATGCAAATAATCTTCAGTGGAGAGAAATAGG
CAGTAACTTTTTATAGAAATTGGATTTTTTGCTTGTTGAAAAGATACTAA
GGAGTGGAATATTATGAAATAGAAGAAAATGCAAAAGATGATTTTTTTCT
TCTTACTTTTTCATTTTAATTTCCCAAAATGTTTTTAACTTTTGCTATTT
GGTAATATTCCTGCACTCTTGAATATCTTTTCAACAAGCACAATTTGGTT
CAAATTCTACAAGTTTTAGCCTTTTTTTCTCCTCTGCAGATAATATTAAT
ATCATACAGGCTTTTATTGTCAATTTTTTAAGTAATACTTTTACGGCTTT
ATCAACTGTTCTAATTATCAATATCAAACCTACCACAGAATTCAGTATCG
CCGATGACGTCCACGACAGCTCCAGCTTTCTTGTTGGGAATGTGTCGGCA
ACTGTTGTAATCAACAATCTTCAAGTCACGGGCGTTTGCAAATCGAATGT
TGGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018693-exon-sc0000304-1575043694:270814..270952 | TCONS_00018693-exon-sc0000304-1575043694:270814..270952 | Clytia hemisphaerica | exon |
| TCONS_00018693-exon-sc0000304-1575043694:267698..267814 | TCONS_00018693-exon-sc0000304-1575043694:267698..267814 | Clytia hemisphaerica | exon |
| TCONS_00018693-exon-sc0000304-1510915933:270814..270952 | TCONS_00018693-exon-sc0000304-1510915933:270814..270952 | Clytia hemisphaerica | exon |
| TCONS_00018693-exon-sc0000304-1510915933:267698..267814 | TCONS_00018693-exon-sc0000304-1510915933:267698..267814 | Clytia hemisphaerica | exon |
| TCONS_00018693-exon-sc0000304-1491911889:270814..270952 | TCONS_00018693-exon-sc0000304-1491911889:270814..270952 | Clytia hemisphaerica | exon |
| TCONS_00018693-exon-sc0000304-1491911889:267698..267814 | TCONS_00018693-exon-sc0000304-1491911889:267698..267814 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000304 | supercontig | sc0000304:267698..270952 - |
Blast
The following BLAST results are available for this feature:
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