TCONS_00018657 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018657
Unique NameTCONS_00018657
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length263

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018657 ID=TCONS_00018657|Name=TCONS_00018657|organism=Clytia hemisphaerica|type=transcript|length=263bp
CCTAAAGTAAACTTAGAgacaaaaaatgtaaatatataTTCCCTCAAAAT
GTTTATAGGGTGGAGACCCACAGCACAGCCAAGTAGGAATGCCCTTTTCG
TATTTTTAgacttattttatttttagccAAGGTAGATATTCAacatattt
tatttaatttgaaacgTAAACGAGAAAGGATTCTCTTGCATACACTACTT
CAAGCTTGGCTTAGACCTTCCTTAGCTCttgattcaattttttctcaCTC
GTGTCAACTTTAN
Run BLAST on NCBI

transcript from alignment at sc0000303:337551..337813

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018657 ID=TCONS_00018657|Name=TCONS_00018657|organism=Clytia hemisphaerica|type=transcript|length=263bp|location=Sequence derived from alignment at sc0000303:337551..337813 (Clytia hemisphaerica)
NTAAAGTTGACACGAGtgagaaaaaattgaatcaaGAGCTAAGGAAGGTC
TAAGCCAAGCTTGAAGTAGTGTATGCAAGAGAATCCTTTCTCGTTTAcgt
ttcaaattaaataaaatatgtTGAATATCTACCTTggctaaaaataaaat
aagtcTAAAAATACGAAAAGGGCATTCCTACTTGGCTGTGCTGTGGGTCT
CCACCCTATAAACATTTTGAGGGAAtatatatttacattttttgtcTCTA
AGTTTACTTTAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010436XLOC_010436Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018657-exon-sc0000303-1491911889:337551..337813TCONS_00018657-exon-sc0000303-1491911889:337551..337813Clytia hemisphaericaexon
TCONS_00018657-exon-sc0000303-1510915933:337551..337813TCONS_00018657-exon-sc0000303-1510915933:337551..337813Clytia hemisphaericaexon
TCONS_00018657-exon-sc0000303-1575043694:337551..337813TCONS_00018657-exon-sc0000303-1575043694:337551..337813Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000303supercontigsc0000303:337551..337813 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.463356	0	0	0	1.80386	6.24022	1.30441	0.528817	4.18579	1.74832	1.49684	0	0.741721	0.886056	0	0	0.730679	1.56753	0	0	0.319128	1.11722	1.81318	0.673764	1.75862	0.463429	0.668842	0	0.651868
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00018657 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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