TCONS_00018630 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018630
Unique NameTCONS_00018630
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3055

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018630 ID=TCONS_00018630|Name=TCONS_00018630|organism=Clytia hemisphaerica|type=transcript|length=3055bp
CAAGTAGCATCGACACATATTTGTGGGTGGCGTGAACTGAAATCGCTGAA
AGCATTGGATGTTCCCTTAATGTAGCATAGAGAGACATAATGTTCACTCA
GTGTGGACAAAAGTGTTGACACACGTGAGGAAGCTGAGAATTGTCCATTG
TGTAGTTTTCAAAAATGCTTCTACACAAGGCTGATTGTCCGTTAAACATT
GCAGGGGATGGTGTGATTCAGGAATGAAAGGATTATGGCGACTGCATTAG
TTGATCATCACCATAGAACTTTGATATCAAAGATAAATCATAGAATAACC
AGCAACGAGAAATTCTTTTCTTTGGAATTTTATCCTCCTCGTACACCAAG
TGGCACATTCAACTTGTTTGAAAAATGTGATCGATTCTCAAAGGGACAAC
CGttattttgtgacgtcacatgTGATAAAGTCAAAgatgaaagaaaaagt
aatcattcagtcaaagtAGCTTCAACAGCTCAAAACATAACAATGTGTGA
TACAATGGTTCAACTAAATGCTCACGATTTGGTAGAAGAAAAAGCTATTG
AAGTGTTATCAAATGCCAAAGATCATGGTCTGTCTACAGTGATGGTTTTA
ATGGAAGGAATTGAAGAGAGTGAAAGCAGTGGTGACTTTGAATGCTCAGC
TGAACTAGTTCGATTTATAAGAGAAGTGTATGAAGATTACTTTACTATAT
GTGTAGCAGGTTACCCAAATTGTATCGAGTATGAATCGTTTTATGAACAA
AGTATGGAACACTTGATTGAAGAGGTGGAAGCAGGTGCAGACTTTATCAT
CACCCAAATGGTTTTCGATGCGACTGATTTCTTTAAATTTGTCAATAAAT
GCAGGGAAAATTCAATATCTGTACCTATTCTTCCTGGTATATTTCCAATC
CAGaGTTATGGTTGTATCACCCAGGTGGCTAGACATTCTCGTATTAAAAT
CCCAAACAAAATCATGAATGTTTTGAAACCGATCAAAAACAATGATGCCA
GTGTGCTTAAATATGGAATATTCTTAACGGTTGAATTGTGCAAGTATTTA
TTACAAAATGCTTTATGTGCTGGCTTACACTTTTATACATTGAATCGTGA
AACTGCAACAACGGAGGTCTTGAAACGAGTTGGTTTATGGCGGGAAGCTA
AATTGGAACACCGGGTTTTACCATGGAAATCCGATTCGGATTCGAATGAG
CGTGAAGGAGAAGAAGTTCGCCCAATTTTCTGGTCATGTCGACCGAAGAG
TTACGAACATAGAACTTCTTGTTGGGAAAACTTTCCGAATGGTCGTTGGG
GAGATTCATCCACAGCAGAATTTGGAAGTTTTAAAGACTATCATTTATTT
TTTGCTAAGAATAATAATTTTCAAGAGCAAAAGAAAATGTGGGGTGATCA
GTTGACTTGTTTGCAAGATATATTTGATGTGTTTGTGGCATTTATCAGTG
GAAAGCCGAATAAAAATGGTGTAAAGGTCAAGCAGATTCCATGGAGTGAG
GAAGACTTAGCTCCAGAAACATCCTTATTAACTGATGAACTTTTGCACTT
AAATCAAAATGGTATCTTAACTATTAACAGTCAACCCAATGTAAATTGTG
TCCCTTCAACTGATAAAACATTTGGCTGGGGAAACCCTGGAGGATACGTT
TTCCAGAAAGGCTACTTGGAGTTTTTCTGCTCGGAAGAAGATGCAAAAAA
TCTGTTAACTGTTTTGAAGAATCATGACACCATTAATTATCATCTTGTCA
AAGCATCGGGAGATGAGAATTATACGAACTGTGACGACGAGGAAGCGAAC
GTTGTGACATGGGGTGTTTTCACCGGAAGTCTTGTCATCCAACCGACGGT
TGTGGACCCGGTGGCGTTTCATTACTGGAAGGAAGAAGCTTTCGAGCTTT
GGATCGAGCAATGGGGTCGCTTATATGGGCCGTCTTCTAAATCACGTCAA
ATGATACAGCAAATACACGATGGTTTCTACCTCGCCAATCTGGTTGACAA
TGATTATCCGAGAGGGAATCGACTGTTTGACGTTGTACGTACTGTTATTG
GAATGAGAAAATGattcagatttcgaaaaatggcttaaaatcaTACGAAA
TAAAATGaggtggtgtttaaaatttgccAAATACATTTATCAACCATTTT
GTGGAGAGTTACGTGAAACAGGATTGTGCTCGAGGTTACCAGATTCTAAT
GATGTCATTATTAGCTTACATCTCACAGGACTTGCGACTTCTTGTTAACT
CTTGTAATCTCCTTTCTGGTGCCAAGATTGATCGTCGTAATGTCAATTGT
TGTGTTGCTTGTGTAGAGTTGTTTGTATTAGCAAAAAAGTGATCAGAAGT
TCTAACATTTTCTTTTCACAAGAAAACTTTGATAGGTTCATGGTTTTATC
ACTGATGAAATACATTGTTATAGGCATTTAGTTGAGCTATTAGGATTATA
AgcttaaattcaaaaattttcaaccagGTGCTTATCTGTTCTGGGCGCCA
TATTGGACCTTTGCCCATCAAAGTAAGAAAGTTAGTCTTAAAACACATAG
AAAGATGTTTAAAACAATACTTTTAGTAAATAGATAGACGAAATTGTCAC
CTACTGTATTTCCTTTGAGAACAACACCAATTTTTTGTCACTGATAGTAA
ATTCACGGGGTATTTTTAACCGAAATCTGATCATGAAAATTTAATCAAGA
TTTTTAGTTTCgcaaaaaggcaaaaattctGGGGTGTCCGATTGAAGTAA
TCATTCAGCCGCTGATAGACTTCTGTCTGTTTATGGGTAGGGTGTTTATT
GTGTAGGATGTGTCTATtttggtgaaagagtttttaaaattcaaagagct
ttttattagaattatcatatttttcttgaatttattCGTAATTTTTCTAA
AGTGTAAATATGTAGATAGGAATGTGATTTTTTTGGAGATGActtttatt
atcaaaatttcttgatCTTTTTTCACCTGAATAAATAAATGTACATAGTA
ATCATATAATTAGAGCACAAATACATTATTAAAGCATTATTTAAAATGCA
TAGAA
Run BLAST on NCBI

transcript from alignment at sc0000303:159393..165369-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018630 ID=TCONS_00018630|Name=TCONS_00018630|organism=Clytia hemisphaerica|type=transcript|length=5977bp|location=Sequence derived from alignment at sc0000303:159393..165369- (Clytia hemisphaerica)
CAAGTAGCATCGACACATATTTGTGGGTGGCGTGAACTGAAATCGCTGAA
AGCATTGGATGTTCCCTTAATGTAGCATAGAGAGACATAATGTTCACTCA
GTGTGGACAAAAGTGTTGACACACGTGAGGAAGCTGAGAATTGTCCATTG
TGTAGTTTTCAAAAATGCTTCTACACAAGGCTGATTGTCCGTTAAACATT
GCAGGGGATGGTGTGATTCAGGAATGAAAGGCGAGAAGTGTTTCACTCCA
GCAGTTATAGGGAGCACTTCAAGTTCGCAAGGCTGTCAATCTTGTTGATG
TTGTTTTAATTTGAGAAATGTAAATTTTGGTTGCAAAAGTATAATATTTT
TAAAACCTTCATAAAGATTACACAAAATGCTTTGACATATAAAAGAAGCC
CCTTCGGAACCAAAAAATCATTTTGAATTCCTCTTTTATTCAAATTTCAG
GATTATGGCGACTGCATTAGTTGATCATCACCATAGAACTTTGATATCAA
AGATAAATCATAGAATAACCAGCAACGAGAAATTCTTTTCTTTGGAATTT
TATCCTCCTCGTACACCAAGTGGCACATTCAACTTGTTTGAAAAATGTGA
TCGATTCTCAAAGGGACAACCGTTATTTTGTGACGTCACATGTGATAAAG
TCAAAGATGAAAGAAAAAGTAATCATTCAGTCAAAGTAGCTTCAACAGCT
CAAAACATAACAATGTGTGATACAATGGTTCAACTAAATGCTCACGATTT
GGTAGAAGAAAAAGCTATTGAAGTGTTATCAAATGCCAAAGATCATGGTC
TGTCTACAGTGATGGTTTTAATGGAAGGTATTACTAGTTATTTTTTAAAT
ATTTTTTCTAAATTTTTGAGATTTTGAAATGTAAAAATAGCGTTGACAAA
TAAATTGGCTCTTAGGCGGCAGCATCTAATGAGTAGTCTAGGCTATTAGG
TGGTCTTCGTTCCTTTTATTTGATAGATATCGTCATTGTATCTTCTGAAA
ATAGACGATATCGGCTCAACATGAAAACTCAGATTTGATCCACGAGAATT
TCCCACAATGCTTTGCGCGGAAAATATTTCACTGCAAACTTTTTTCCGCG
CAAAGTATTGTGGGGAATTCTCGGGGATCAAATCTGAGTGTTCATGTTAA
GCCGATATCGTCTATTGATCAAATAGTACTGATTAGTAAAATAAATTGAC
ATTAATTTACTTATTCCCAAAGATCTAACAAATCCATTTCTTTTCTGCAG
GAATTGAAGAGAGTGAAAGCAGTGGTGACTTTGAATGCTCAGCTGAACTA
GTTCGATTTATAAGAGAAGTGTATGAAGATTACTTTACTATATGTGTAGC
AGGTATGTTTGAGATGTTCAATTAATAATGATATGTAACTTTTTCTAGGC
TGGTGGCATATTGTACTCCCTGCAGTTTTGTAGAGGCCGTCTTCAATTCA
GATTAAGCTTTTTTCTTAAGATAAAAAAATAGAAAATCTTAGCCTCCAAA
CTTGTATTCACTTGATGAAGCTTTAAAGCTTTAAGCTAAAATACGTCACT
TGGAGATTGCATCTGATTTCTTAATTTAGTAAGACGAAGAAGATTCACTT
TGTTTAACTTTAGAGCTTTTGAAAGCGTCATATTTATATATGTTATTACT
TTTCAAGGTTACCCAAATTGTATCGAGTATGAATCGTTTTATGAACAAAG
TATGGAACACTTGATTGAAGAGGTGGAAGCAGGTGCAGACTTTATCATCA
CCCAAATGGTTTTCGATGCGACTGATTTCTTTAAATTTGTCAATAAATGC
AGGGAAAATTCAATATCTGTACCTATTCTTCCTGGTATATTTCCAATCCA
GGTAAAACTTCTTACTTTTATTTTCTTGAAATGTTTAACACGTTTTTACA
CCATATTATCTTTAACTAAAAATTGCATTGGAGCTAGACCTTCTGCATTC
CATTTTGCTGGTCGTAAGTTCTTGAAAAGGCTAGGTTTGCTTTCTTTTTT
ACCCGACTTAATTAAAACATTTAACACTATTTTGTCTTTTTAGAGTTATG
GTTGTATCACCCAGGTGGCTAGACATTCTCGTATTAAAATCCCAAACAAA
ATCATGAATGTTTTGAAACCGATCAAAAACAATGATGCCAGTGTGCTTAA
ATATGGAATATTCTTAACGGTTGAATTGTGCAAGTATTTATTACAAAATG
CTTTATGTGCTGGCTTACACTTTTATACATTGAATCGTGAAACTGCAACA
ACGGAGGTCTTGAAACGAGTTGGTTTATGGCGGGAAGCTAAATTGGAACA
CCGGGTTTTACCATGGAAATCCGATTCGGATTCGAATGAGCGTGAAGGAG
AAGAAGTTCGCCCAATTTTCTGGTCATGTCGACCGAAGAGTTACGAACAT
AGAACTTCTTGTTGGGAAAACTTTCCGAATGGTCGTTGGGGAGATTCATC
CACAGCAGAATTTGGAAGTTTTAAAGACTATCATTTATTTTTTGCTAAGA
ATAATAATTTTCAAGAGCAAAAGAAAATGTGGGGTGATCAGTTGACTTGT
TTGCAAGATATATTTGATGTGTTTGTGGCATTTATCAGTGGAAAGCCGAA
TAAAAATGGTGTAAAGGTAATGAAAATGAATTTTCCAAGATTGAACTCTT
TTCTTTTTGCAGTTACATAACAACCAAACAAATTGTTTTGATAATAAGTT
TATTTACCTAAGCATTAACATACATGTCAAGGTTATGCAAACTTTATCAC
TCAAATAATTCATTAAAAAAATTCAAAGCCTTTTAACAAATACAACAAAA
GTTTGTAGGAATTCATAATTTAATTTAACATCGTTCTTCAAAAATTTTAA
TGCCGTTTAGCAAGTAAGGGGTTGTTGGGTTGACATTTCTGTGTCACTCA
ACTTCACATGTTGTTCACACGTTATAGGCGAAATAAAATTAAATCACTAT
CGTAAAGGTTTTATTTTTACATATGTGTTCCCGTTTCATATCAGACACAT
ATTTCATATCAGGACAGTGTCTGCCTATTGTTATATTATGCTGATATAAG
CAAAAACTGTTTTTCTTTTCCTCTTTCTGACCAATCTTGCTCCACATCTG
TGTCAATTCAATATAAAAAAAACTTTAAATTAAGATTGATGAGTAAGGAA
ACAATATCACGCTTATGTAAAGACAAAGCCTTTTATTTAGATTTGTATGA
TTGTGAGATTGTATCTTCATTTATAGGTCAAGCAGATTCCATGGAGTGAG
GAAGACTTAGCTCCAGAAACATCCTTATTAACTGATGAACTTTTGCACTT
AAATCAAAATGGTATCTTAACTATTAACAGTCAACCCAATGTAAATTGTG
TCCCTTCAACTGATAAAACATTTGGCTGGGGAAACCCTGGAGGATACGTT
TTCCAGAAAGGCTACTTGGAGTTTTTCTGCTCGGAAGAAGATGCAAAAAA
TCTGTTAACTGTTTTGAAGAATCATGACACCATTAATTATCATCTTGTCA
AAGCATCGGTTAGTAATAAAATAGCTCACATTCTCTACTCTATAGATTAT
GAGGAAGCATCTTCTGATAAACATTTCATGACAATGTCATTTTTTCAAAA
TCGCGCCCCTTCGATCGATTTCAATGTGGCGTCTTCATTGCGAGCAAAGC
AGGCGAGAAAATTGTGCAATTTATTTAAAATTATTTTTGTGAAACTGGTC
TTGGGGCACAGCTTAATAAGGAGCGTAAAGTACGTTTTTTAAAGAATAAG
GTGTTTTAAAAAAACTTCTTTTGGCGCCCCTTGCTCTTCGGCGCCTCTTC
AAAAAAGATCCGCTGAGGGGGGGAGGGCGTGACTCTCCTGGCTGAACTCC
ACTGGTTTCATCAACTTGAAGTCTTTTTGATAAAAGGTTATTGGCTATAT
CATGTGAAATTTTTGACGTTTAAAGCTATTTTCTCGGAGTTTTGACACTA
TATCTTAAAAGCTAGCAACTTGGAAATTGAGATCTCTCCTATTTTGTTTG
AACAATGAAATTTAAGCAAAAACAAGAAGAGGAATATTATGAGCTCCATA
CAGCGCTGAGCTGGTTCCCAATAGTCCTAAAATATTACTCAATAATAAGA
TTAATGTTGGCAATTCTTTGATCATATCAGTTAGATTAAAACTTCTCTCT
CCCAAAATATGGATACCTCTTTAATCTCACGGCGACCAGATTGATCAGAA
ATTTTGATTTGTTTTAACCTATTACAGGGAGATGAGAATTATACGAACTG
TGACGACGAGGAAGCGAACGTTGTGACATGGGGTGTTTTCACCGGAAGTC
TTGTCATCCAACCGACGGTTGTGGACCCGGTGGCGTTTCATTACTGGAAG
GTGAGATTGGTTAAGCTCTAGTTTAGACAACTTTCAGCCCCGCTTATTCT
AGTTGTTAGATTAGGCACAAAGTCTATAGAAAAGTTGTTAAGCAAAATCT
TTGCTTGGAGTGTATAACAATGTAAATCATATTGACGTGCCTATAAGATG
TAAGAAGTCAGCTTTCTGATGAATTTAACCACATTTAGAATAGACAGGAC
AAAAGTGGGCTGAGAAGTAAATACAGGTTGTTTTGGCACCCCATTTAGGT
TTGGCTGTTTCTGTTTGGTGCCTTCCTGAATTTCACCTTCTCAAGCTAGG
ACACAAGAAAACTGGTACTCTCAAGGCTATTCCTAAATTTGTTTTTCTTT
TTATTGGCCAAAATAGATGGTATCAATCATCATTCTAAAAACCATGATTA
AGAAAATGTAGAAAAGCATAATATGCAAGTAACCCATCTTTTCGTTATTA
CAGGAAGAAGCTTTCGAGCTTTGGATCGAGCAATGGGGTCGCTTATATGG
GCCGTCTTCTAAATCACGTCAAATGATACAGCAAATACACGATGGTTTCT
ACCTCGCCAATCTGGTTGACAATGATTATCCGAGAGGGAATCGACTGTTT
GACGTTGTACGTACTGTTATTGGAATGAGAAAATGATTCAGATTTCGAAA
AATGGCTTAAAATCATACGAAATAAAATGAGGTGGTGTTTAAAATTTGCC
AAATACATTTATCAACCATTTTGTGGAGAGTTACGTGAAACAGGATTGTG
CTCGAGGTTACCAGATTCTAATGATGTCATTATTAGCTTACATCTCACAG
GACTTGCGACTTCTTGTTAACTCTTGTAATCTCCTTTCTGGTGCCAAGAT
TGATCGTCGTAATGTCAATTGTTGTGTTGCTTGTGTAGAGTTGTTTGTAT
TAGCAAAAAAGTGATCAGAAGTTCTAACATTTTCTTTTCACAAGAAAACT
TTGATAGGTTCATGGTTTTATCACTGATGAAATACATTGTTATAGGCATT
TAGTTGAGCTATTAGGATTATAAGCTTAAATTCAAAAATTTTCAACCAGG
TGCTTATCTGTTCTGGGCGCCATATTGGACCTTTGCCCATCAAAGTAAGA
AAGTTAGTCTTAAAACACATAGAAAGATGTTTAAAACAATACTTTTAGTA
AATAGATAGACGAAATTGTCACCTACTGTATTTCCTTTGAGAACAACACC
AATTTTTTGTCACTGATAGTAAATTCACGGGGTATTTTTAACCGAAATCT
GATCATGAAAATTTAATCAAGATTTTTAGTTTCGCAAAAAGGCAAAAATT
CTGGGGTGTCCGATTGAAGTAATCATTCAGCCGCTGATAGACTTCTGTCT
GTTTATGGGTAGGGTGTTTATTGTGTAGGATGTGTCTATTTTGGTGAAAG
AGTTTTTAAAATTCAAAGAGCTTTTTATTAGAATTATCATATTTTTCTTG
AATTTATTCGTAATTTTTCTAAAGTGTAAATATGTAGATAGGAATGTGAT
TTTTTTGGAGATGACTTTTATTATCAAAATTTCTTGATCTTTTTTCACCT
GAATAAATAAATGTACATAGTAATCATATAATTAGAGCACAAATACATTA
TTAAAGCATTATTTAAAATGCATAGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010414XLOC_010414Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018630-exon-sc0000303-1575043694:165140..165369TCONS_00018630-exon-sc0000303-1575043694:165140..165369Clytia hemisphaericaexon
TCONS_00018630-exon-sc0000303-1575043694:164543..164919TCONS_00018630-exon-sc0000303-1575043694:164543..164919Clytia hemisphaericaexon
TCONS_00018630-exon-sc0000303-1575043694:164018..164119TCONS_00018630-exon-sc0000303-1575043694:164018..164119Clytia hemisphaericaexon
TCONS_00018630-exon-sc0000303-1575043694:163519..163712TCONS_00018630-exon-sc0000303-1575043694:163519..163712Clytia hemisphaericaexon
TCONS_00018630-exon-sc0000303-1575043694:162754..163326TCONS_00018630-exon-sc0000303-1575043694:162754..163326Clytia hemisphaericaexon
TCONS_00018630-exon-sc0000303-1575043694:161862..162143TCONS_00018630-exon-sc0000303-1575043694:161862..162143Clytia hemisphaericaexon
TCONS_00018630-exon-sc0000303-1575043694:161020..161142TCONS_00018630-exon-sc0000303-1575043694:161020..161142Clytia hemisphaericaexon
TCONS_00018630-exon-sc0000303-1575043694:159393..160566TCONS_00018630-exon-sc0000303-1575043694:159393..160566Clytia hemisphaericaexon
TCONS_00018630-exon-sc0000303-1510915933:165140..165369TCONS_00018630-exon-sc0000303-1510915933:165140..165369Clytia hemisphaericaexon
TCONS_00018630-exon-sc0000303-1510915933:164543..164919TCONS_00018630-exon-sc0000303-1510915933:164543..164919Clytia hemisphaericaexon
TCONS_00018630-exon-sc0000303-1510915933:164018..164119TCONS_00018630-exon-sc0000303-1510915933:164018..164119Clytia hemisphaericaexon
TCONS_00018630-exon-sc0000303-1510915933:163519..163712TCONS_00018630-exon-sc0000303-1510915933:163519..163712Clytia hemisphaericaexon
TCONS_00018630-exon-sc0000303-1510915933:162754..163326TCONS_00018630-exon-sc0000303-1510915933:162754..163326Clytia hemisphaericaexon
TCONS_00018630-exon-sc0000303-1510915933:161862..162143TCONS_00018630-exon-sc0000303-1510915933:161862..162143Clytia hemisphaericaexon
TCONS_00018630-exon-sc0000303-1510915933:161020..161142TCONS_00018630-exon-sc0000303-1510915933:161020..161142Clytia hemisphaericaexon
TCONS_00018630-exon-sc0000303-1510915933:159393..160566TCONS_00018630-exon-sc0000303-1510915933:159393..160566Clytia hemisphaericaexon
TCONS_00018630-exon-sc0000303-1491911889:165140..165369TCONS_00018630-exon-sc0000303-1491911889:165140..165369Clytia hemisphaericaexon
TCONS_00018630-exon-sc0000303-1491911889:164543..164919TCONS_00018630-exon-sc0000303-1491911889:164543..164919Clytia hemisphaericaexon
TCONS_00018630-exon-sc0000303-1491911889:164018..164119TCONS_00018630-exon-sc0000303-1491911889:164018..164119Clytia hemisphaericaexon
TCONS_00018630-exon-sc0000303-1491911889:163519..163712TCONS_00018630-exon-sc0000303-1491911889:163519..163712Clytia hemisphaericaexon
TCONS_00018630-exon-sc0000303-1491911889:162754..163326TCONS_00018630-exon-sc0000303-1491911889:162754..163326Clytia hemisphaericaexon
TCONS_00018630-exon-sc0000303-1491911889:161862..162143TCONS_00018630-exon-sc0000303-1491911889:161862..162143Clytia hemisphaericaexon
TCONS_00018630-exon-sc0000303-1491911889:161020..161142TCONS_00018630-exon-sc0000303-1491911889:161020..161142Clytia hemisphaericaexon
TCONS_00018630-exon-sc0000303-1491911889:159393..160566TCONS_00018630-exon-sc0000303-1491911889:159393..160566Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000303supercontigsc0000303:159393..165369 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.18259	0	0.536349	0.217563	0	1.3265	0.820488	5.05745e-08	0.420218	0.843309	0	0.41103	0.163397	0.691721	0.613213	0.745707	0	0	0.418843	0.188337	0.259607	0	0	0	0	0.591736	0	0	0	0
Blast
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BLAST of TCONS_00018630 vs. Swiss-Prot (Human)
Match: MTHR (Methylenetetrahydrofolate reductase OS=Homo sapiens GN=MTHFR PE=1 SV=3)

HSP 1 Score: 605.134 bits (1559), Expect = 0.000e+0
Identity = 305/616 (49.51%), Postives = 404/616 (65.58%), Query Frame = 1 
Query:  229 RIMATALVDHHHRTLISKINHRITSNEKFFSLEFYPPRTPSGTFNLFEKCDRFSKGQPLFCDVTCDKVKD--ERKSNHSVKVASTAQNITMCDTMVQLNAHDLVEEKAIEVLSNAKDHGLSTVMVLME---GIEESESSGDFECSAELVRFIREVYEDYFTICVAGYPNCIEYESFYEQSMEHLIEEVEAGADFIITQMVFDATDFFKFVNKCRENSISVPILPGIFPIQSYGCITQVARHSRIKIPNKIMNVLKPIKNNDASVLKYGIFLTVELCKYLLQNALCAGLHFYTLNRETATTEVLKRVGLWREAKLEHRVLPWKSDSDSNEREGEEVRPIFWSCRPKSYEHRTSCWENFPNGRWGDSSTAEFGSFKDYHLFFAKNNNFQEQ-KKMWGDQLTCLQDIFDVFVAFISGKPNKNGVKVKQIPWSEEDLAPETSLLTDELLHLNQNGILTINSQPNVNCVPSTDKTFGWGNPGGYVFQKGYLEFFCSEEDAKNLLTVLKNHD-TINYHLVKASGDENYTNCDDEEANVVTWGVFTGSLVIQPTVVDPVAFHYWKEEAFELWIEQWGRLYGPSSKSRQMIQQIHDGFYLANLVDNDYPRGNRLFDVVRTVIGM 2055
            R     L    H  L  K+  R+ S +K+FSLEF+PPRT  G  NL  + DR + G PL+ DVT     D    K   S+ +ASTA N    +T++ +       E+    L  AK  GL  +M L     G +  E  G F  + +LV+ IR  + DYF ICVAGYP        +E  ++HL E+V AGADFIITQ+ F+A  FF+FV  C +  I+ PI+PGIFPIQ Y  + Q+ + S++++P +I +V++PIK+NDA++  YGI L V LC+ LL + L  GLHFYTLNRE ATTEVLKR+G+W E     R LPW   +    RE E+VRPIFW+ RPKSY +RT  W+ FPNGRWG+SS+  FG  KDY+LF+ K+ + +E+  KMWG++LT  + +F+VFV ++SG+PN+NG KV  +PW++E LA ETSLL +ELL +N+ GILTINSQPN+N  PS+D   GWG  GGYVFQK YLEFF S E A+ LL VLK ++  +NYHLV   G EN TN  + + N VTWG+F G  +IQPTVVDPV+F +WK+EAF LWIE+WG+LY   S SR +IQ IHD ++L NLVDND+P  N L+ VV   + +
Sbjct:   31 RCSTPGLDPERHERLREKMRRRLESGDKWFSLEFFPPRTAEGAVNLISRFDRMAAGGPLYIDVTWHPAGDPGSDKETSSMMIASTAVNYCGLETILHMTCCRQRLEEITGHLHKAKQLGLKNIMALRGDPIGDQWEEEEGGFNYAVDLVKHIRSEFGDYFDICVAGYPKGHPEAGSFEADLKHLKEKVSAGADFIITQLFFEADTFFRFVKACTDMGITCPIVPGIFPIQGYHSLRQLVKLSKLEVPQEIKDVIEPIKDNDAAIRNYGIELAVSLCQELLASGLVPGLHFYTLNREMATTEVLKRLGMWTEDP--RRPLPWALSAHPKRRE-EDVRPIFWASRPKSYIYRTQEWDEFPNGRWGNSSSPAFGELKDYYLFYLKSKSPKEELLKMWGEELTSEESVFEVFVLYLSGEPNRNGHKVTCLPWNDEPLAAETSLLKEELLRVNRQGILTINSQPNINGKPSSDPIVGWGPSGGYVFQKAYLEFFTSRETAEALLQVLKKYELRVNYHLVNVKG-ENITNAPELQPNAVTWGIFPGREIIQPTVVDPVSFMFWKDEAFALWIERWGKLYEEESPSRTIIQYIHDNYFLVNLVDNDFPLDNCLWQVVEDTLEL 642
The following BLAST results are available for this feature:
BLAST of TCONS_00018630 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MTHR0.000e+049.51Methylenetetrahydrofolate reductase OS=Homo sapien... [more]
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