TCONS_00018592 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018592
Unique NameTCONS_00018592
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length215

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018592 ID=TCONS_00018592|Name=TCONS_00018592|organism=Clytia hemisphaerica|type=transcript|length=215bp
GTCTCTCTCAGTGCCCGGTGAGAACTTTTATACCCTTTGGAAAAATGAAG
GATAAAAAAACAGTAaggaataaagaaaataaaaatttctcggGTTCTTA
AATATCTAAATATTTATTGCCAATTGTTCCACTAGGAAGGGGCTCCACCG
TGTCATACTTTCTTGCCTCTTTTAGTTTACCAATTTCCGCTTGCAGAAAT
ATTTGCACCCCTGTN
Run BLAST on NCBI

transcript from alignment at sc0000301:190192..190406

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018592 ID=TCONS_00018592|Name=TCONS_00018592|organism=Clytia hemisphaerica|type=transcript|length=215bp|location=Sequence derived from alignment at sc0000301:190192..190406 (Clytia hemisphaerica)
NACAGGGGTGCAAATATTTCTGCAAGCGGAAATTGGTAAACTAAAAGAGG
CAAGAAAGTATGACACGGTGGAGCCCCTTCCTAGTGGAACAATTGGCAAT
AAATATTTAGATATTTAAGAACccgagaaatttttattttctttattcct
TACTGTTTTTTTATCCTTCATTTTTCCAAAGGGTATAAAAGTTCTCACCG
GGCACTGAGAGAGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010395XLOC_010395Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018592-exon-sc0000301-1491911889:190192..190406TCONS_00018592-exon-sc0000301-1491911889:190192..190406Clytia hemisphaericaexon
TCONS_00018592-exon-sc0000301-1510915933:190192..190406TCONS_00018592-exon-sc0000301-1510915933:190192..190406Clytia hemisphaericaexon
TCONS_00018592-exon-sc0000301-1575043694:190192..190406TCONS_00018592-exon-sc0000301-1575043694:190192..190406Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000301supercontigsc0000301:190192..190406 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	1.51302	2.96051	9.01033	17.0882	6.87206	9.65032	0	1.39482	0	0.889964	0	6.35531	1.51758	0.8143	0.228496	1.0282	0	7.1056	1.292	3.78117	0	0	1.43472	3.84136	4.97541	3.91101	0	1.51113
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00018592 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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