TCONS_00018577 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018577
Unique NameTCONS_00018577
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2622

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018577 ID=TCONS_00018577|Name=TCONS_00018577|organism=Clytia hemisphaerica|type=transcript|length=2622bp
CAAGATTTGACATAAAAAGAAAGCTTGAGTGTGTAATTCATACAACCATG
TTTGAGATTCACGAAGAAAAGGTTGGCTTGTTACCTTCTCACAGTGAACA
AGAGAAATGCTACAAAAAGCAAGTCACTTTCGATGATGACTTGTGCTGTA
ACGAAgGGTCGGACGGTCACCTACGGAATGGGAAGACACCAGACGACAAT
AACAACAAAAGCAACACAAGCCTCAAGAATGGAGTTGGGGCCAAAGGTCT
TCCAAACTCACGACAGAAGCATCGAACGAAGCGAATACAGAGACGAAATA
ATGTCAACATAAAGCATAGTTCTGCCGGTGAATTTGATGCCAATCAAGTC
AAACGCTTCATATTCTTACAATCCCGTATTTACTGGCTTTCCTCTTTAAT
CGGTGATCGACAAAGACCCTACAATTCCACCAAAGGAGTCTTGGGACTTA
TGTTATGGATATTCAATTTAACTATTCATTTCGCATTAGACTTTTATGAA
GCGAATACAGTGTTTCATGTGAGTTGGGCTTCATCTATTGGTGTTTTCCT
CGTCATGTTTATAATATCGACCATCTTTTTAATAAGACACACTGTTCGTT
GGTTCATCAAGACCTTGAAAAAGCTGTCAAAAGACAAAATATACTGCAAA
ACATTCGTTAAATTGAGTTTCATTTTCAAGCTATCACCATATGCAATGTT
TATACTCTCCGTCTCGGGGGCTGGGGCGCAGTATGGTTGCTATGCTTACG
ATGATGCATTGACTGTCTCTTTCACAAAAGCAGGGCCAAACGGAACGAAA
GTGGAATTGGTGCCTAATGCTGCTCACATTGTGATCAACGTTGCACGTTT
CACAAGTCTCATGCACATTTATTATATGATGTTCTTGTTGTTAGGGTTCG
CTCTCATCATATTTTTCACAATAGTACACACGCAAAGACTCTTCAATGCA
CACATTGGGAACGAACTGAAAGCACACCCTCCGTCGATGACTTTCCAAGA
AGCAGTAGACGATGTAGCAATGCGAACCAAATTGTTAAGAAGTGCTTCCG
AAAATACCACGATTATCTTCTCGACGCTTCTATTGGCAACCAGCTTATCC
TTCGTCGTGAACGCATACAACTTTCTATTCATTAAACGTTACGCTATTTA
TATTTGGTTTGCCATCGCTCCTCTCATATGGACAGTCTCAATTCTGATTG
GGTCAGCCTTTGTGACGTCATCCTACCAAAAGCTAAAACTAGTAGTCATG
CAGTCATGGGTAGAGATACCAGAGAAGTATGATGAGCTGTGGAGTAGACG
AACTACCTCTAATAGAATCAATACAGCAGCATCTATAAGAAAACCCACCT
TAGATTGGCGCGCCGGTCTTGAAAACATGCGGCGTCGAAAGGCCGAACGC
GAGGCCACCGAACACGCTGCTATGGAGGAGGAAGTTTTTGAGAAGGAAGA
TCTAAAAGAGAACTGTGTCGTTGATATTAACGAAGAGATGGTTAATGAAC
AGATCAATGTCGAtaaagaaaacgaaaagaaagaaagtgtGTTTTCAAAG
ACCGTTCGAAATATCAACCTTTTAAATAAATTCATCAAAGGTGCAAGCGA
CAAGAGTGCCGACGAGATCGAAATGGGAGCTGAAGAAGTTAGAAAATCAC
TCTATGACAATGTGGAACAACAAAAAGATACTTTGACTGTTGAGCAATCA
GCGACAGGTGAAGAAAGCTCGTACAAAAGTGGTGAAGAGTTTCGTGAGAC
CACGGAAACAGGTGACCAGTTAACTGTCCCTTCTTCTGATGCTGCTCTTT
ACAGTGATAATCCCATTGTTAACGAACAAATACGTTTGAAAGAAGTGCAA
GAATTGAGAAAACAGTCTATAGCcagtgaaaacaaagaaaacgacTCTTC
GGCCTGGAAAAAGATTCCGCGTATAAAATTTCGTAAAGCTACTAAACCAA
ACATTGAAATTGATAGGACTAGGGAAGAAATATCCACGTTTGAAAAGGAG
AACAGCAAAAACGACGAGGGGCCGCAAAGGACTAACAGCGTTAAATTCGA
TAAAGTGGTGCGCCTTGCACAGCAAGTCAACAAGTTCACAGACAACACAA
AAAGGCAACAAATAAGACGAAAGTTCAATTATGAAAAGTACATCAAATAT
CTGGAATTGACTTTAGATACTGTGGGATTTTCTTTGGGTAAAGTGACGAT
TACTTGGGACCGCGTTTCTTTCTTTATCGTTCTTTTAATGACCCTGGTGG
GTGTGTTTGCTCAGAACGCATTCCTCAAGTAATCAACAGTGAAGGCGATC
GAAATAACTAAGATATAAATGATTCATTCAAACAATGATCTAACGACGGT
GCATGTGCTCATGTTACCGAAATGCATTTTCTTATCAAGATTCCGATATC
AACCCTCCTCGCGTTATTGTAGTTTCAATTTCAtagaattatttttaaaa
ttttttgtagATAATGGTTCTTTTACTTCTTTTTTACGCATGTACATTTC
AGTgagaattcaaattcaaaaagaaacaaCGACTTACAGAAATCTTTGGA
CAACACTTATCTTCTTTACACGTGCAAGTATGAAAATAATGTGCAGTTAA
AATCTACCCAATCCAGTTGTNN
Run BLAST on NCBI

protein sequence of TCONS_00018577-protein

>TCONS_00018577-protein ID=TCONS_00018577-protein|Name=TCONS_00018577-protein|organism=Clytia hemisphaerica|type=polypeptide|length=759bp
RFDIKRKLECVIHTTMFEIHEEKVGLLPSHSEQEKCYKKQVTFDDDLCCN
EGSDGHLRNGKTPDDNNNKSNTSLKNGVGAKGLPNSRQKHRTKRIQRRNN
VNIKHSSAGEFDANQVKRFIFLQSRIYWLSSLIGDRQRPYNSTKGVLGLM
LWIFNLTIHFALDFYEANTVFHVSWASSIGVFLVMFIISTIFLIRHTVRW
FIKTLKKLSKDKIYCKTFVKLSFIFKLSPYAMFILSVSGAGAQYGCYAYD
DALTVSFTKAGPNGTKVELVPNAAHIVINVARFTSLMHIYYMMFLLLGFA
LIIFFTIVHTQRLFNAHIGNELKAHPPSMTFQEAVDDVAMRTKLLRSASE
NTTIIFSTLLLATSLSFVVNAYNFLFIKRYAIYIWFAIAPLIWTVSILIG
SAFVTSSYQKLKLVVMQSWVEIPEKYDELWSRRTTSNRINTAASIRKPTL
DWRAGLENMRRRKAEREATEHAAMEEEVFEKEDLKENCVVDINEEMVNEQ
INVDKENEKKESVFSKTVRNINLLNKFIKGASDKSADEIEMGAEEVRKSL
YDNVEQQKDTLTVEQSATGEESSYKSGEEFRETTETGDQLTVPSSDAALY
SDNPIVNEQIRLKEVQELRKQSIASENKENDSSAWKKIPRIKFRKATKPN
IEIDRTREEISTFEKENSKNDEGPQRTNSVKFDKVVRLAQQVNKFTDNTK
RQQIRRKFNYEKYIKYLELTLDTVGFSLGKVTITWDRVSFFIVLLMTLVG
VFAQNAFLK
Run BLAST on NCBI

transcript from alignment at sc0000301:202711..206338-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018577 ID=TCONS_00018577|Name=TCONS_00018577|organism=Clytia hemisphaerica|type=transcript|length=3628bp|location=Sequence derived from alignment at sc0000301:202711..206338- (Clytia hemisphaerica)
CAAGATTTGACATAAAAAGAAAGCTTGAGTGTGTAATTCATACAACCATG TTTGAGATTCACGAAGAAAAGGTTGGCTTGTTACCTTCTCACAGTGAACA AGAGAAATGCTACAAAAAGCAAGTCACTTTCGATGATGACTTGTGCTGTA ACGAAGGTATAAAATTGAAAATAAATCTCAATAAAGTATAGGGGTAGAGC ATTGAAACAAAAATGTTGTCTGAAATGCCCTTTTCCCTTCTTTTCAGGGT CGGACGGTCACCTACGGAATGGGAAGACACCAGACGACAATAACAACAAA AGCAACACAAGCCTCAAGAATGGAGTTGGGGCCAAAGGTCTTCCAAACTC ACGACAGAAGCATCGAACGAAGCGAATACAGAGACGAAATAATGTCAACA TAAAGCATAGTTCTGCCGGTGAATTTGATGCCAATCAAGTCAAACGCTTC ATATTCTTACAATCCCGTATTTACTGGCTTTCCTCTTTAATCGGTGATCG ACAAAGACCCTACAATTCCACCAAAGGAGTCTTGGGACTTATGTTATGGA TATTCAATTTAACTATTCATTTCGCATTAGACTTTTATGAAGCGAATACA GTGTTTCATGTGAGTTGGGCTTCATCTATTGGTGTTTTCCTCGTCATGTT TATAATATCGACCATCTTTTTAATAAGACACACTGTTCGTTGGTTCATCA AGACCTTGAAAAAGCTGTCAAAAGACAAAATATACTGCAAAACATTCGTT AAATTGAGTTTCATTTTCAAGGTAAGCTACAAGCATTCGTTCATTCCTCT TTTCACTTTTAATGACAATTAAAGGTCATCAGTATATGGCTTAGAACTTT TCGGCCTCATTTTTTGCTGGCTAGCTGATCTGAGTGAGGAGGGGGGATGA AAAGGAATGGTGAGATAGAAAGTGTGTTTTACAAACCCTGGGATAACTGA TTGTATCAAATGAAAGTAATATCATGTAAAAGTAGTGGTCAAGGCGACGA TAAAGCTCAAAACAAAACTTCATGTACTATTCAAATCGATCTTTAGAATA GCCTTCGATTCACACTTCTATCTTTTTTTATTGCAGCTATCACCATATGC AATGTTTATACTCTCCGTCTCGGGGGCTGGGGCGCAGTATGGTTGCTATG CTTACGATGATGCATTGACTGTCTCTTTCACAAAAGCAGGGCCAAACGGA ACGAAAGTGGAATTGGTGCCTAATGCTGCTCACATTGTGATCAACGTTGC ACGTTTCACAAGTCTCATGCACATTTATTATATGATGTTCTTGTTGTTAG GGTTCGCTCTCATCATATTTTTCACAATAGTACACACGCAAAGACTCTTC AATGGTACGTGCTATCTTCTTTTTACCCTTTTACGGGTGAACAAGTTTCT TCACAACTTTTTCAACGTTAAAACAATTTTGAAATTTTGATTTGAAAGCA ATTTAGATGAGAAATGTTGTGAAAAATAGGGCTCGATAAAAACTTCGTGA TAAAGGATGGTGAAAGCAAACAAAACATACAAGCAAAGACCCCCACTATT TGAGATATATAGGCGGAGAAAGGATTACTCTGGATTAAATACTTTAGAGA GGATATTATTAAACATAATCCTGTTCGTTTCCAATCAAAACAATGTTGTC GTCGGTGTTAATGAACAGATTTGATTCACTATTAATCTTCAAAGGTTTGT AGTAGATTGACAAATATAATAATGGTAGTGAATAAAAAAAATCAAGCGTG ATCTGAGGGACGATGATCACATTACGATAACCTTCTTCTCTCTTCCTTCA TAGCACACATTGGGAACGAACTGAAAGCACACCCTCCGTCGATGACTTTC CAAGAAGCAGTAGACGATGTAGCAATGCGAACCAAATTGTTAAGAAGTGC TTCCGAAAATACCACGGTAAGTCTCGGAGATTCTCTACTCGAAATGTCTG TAAAAACAAGTAGTTTTTCAATTAAGTTTAAATTATTCATTGACATTTGA AGAGGTCACAGTTAGACTGCTATTTTAAATAGTCCCAATTTTACATTGAC CATCTTTTTGATTTCAGATTATCTTCTCGACGCTTCTATTGGCAACCAGC TTATCCTTCGTCGTGAACGCATACAACTTTCTATTCATTAAACGTTACGC TATTTATATTTGGTTTGCCATCGCTCCTCTCATATGGACAGTCTCAATTC TGATTGGGTCAGCCTTTGTGACGTCATCCTACCAAAAGCTAAAACTAGTA GTCATGCAGTCATGGGTAGAGATACCAGAGAAGTATGATGAGCTGTGGAG TAGACGAACTACCTCTAATAGAATCAATACAGCAGCATCTATAAGAAAAC CCACCTTAGATTGGCGCGCCGGTCTTGAAAACATGCGGCGTCGAAAGGCC GAACGCGAGGCCACCGAACACGCTGCTATGGAGGAGGAAGTTTTTGAGAA GGAAGATCTAAAAGAGAACTGTGTCGTTGATATTAACGAAGAGATGGTTA ATGAACAGATCAATGTCGATAAAGAAAACGAAAAGAAAGAAAGTGTGTTT TCAAAGACCGTTCGAAATATCAACCTTTTAAATAAATTCATCAAAGGTGC AAGCGACAAGAGTGCCGACGAGATCGAAATGGGAGCTGAAGAAGTTAGAA AATCACTCTATGACAATGTGGAACAACAAAAAGATACTTTGACTGTTGAG CAATCAGCGACAGGTGAAGAAAGCTCGTACAAAAGTGGTGAAGAGTTTCG TGAGACCACGGAAACAGGTGACCAGTTAACTGTCCCTTCTTCTGATGCTG CTCTTTACAGTGATAATCCCATTGTTAACGAACAAATACGTTTGAAAGAA GTGCAAGAATTGAGAAAACAGTCTATAGCCAGTGAAAACAAAGAAAACGA CTCTTCGGCCTGGAAAAAGATTCCGCGTATAAAATTTCGTAAAGCTACTA AACCAAACATTGAAATTGATAGGACTAGGGAAGAAATATCCACGTTTGAA AAGGAGAACAGCAAAAACGACGAGGGGCCGCAAAGGACTAACAGCGTTAA ATTCGATAAAGTGGTGCGCCTTGCACAGCAAGTCAACAAGTTCACAGACA ACACAAAAAGGCAACAAATAAGACGAAAGTTCAATTATGAAAAGTACATC AAATATCTGGAATTGACTTTAGATACTGTGGGATTTTCTTTGGGTAAAGT GACGATTACTTGGGACCGCGTTTCTTTCTTTATCGTTCTTTTAATGACCC TGGTGGGTGTGTTTGCTCAGAACGCATTCCTCAAGTAATCAACAGTGAAG GCGATCGAAATAACTAAGATATAAATGATTCATTCAAACAATGATCTAAC GACGGTGCATGTGCTCATGTTACCGAAATGCATTTTCTTATCAAGATTCC GATATCAACCCTCCTCGCGTTATTGTAGTTTCAATTTCATAGAATTATTT TTAAAATTTTTTGTAGATAATGGTTCTTTTACTTCTTTTTTACGCATGTA CATTTCAGTGAGAATTCAAATTCAAAAAGAAACAACGACTTACAGAAATC TTTGGACAACACTTATCTTCTTTACACGTGCAAGTATGAAAATAATGTGC AGTTAAAATCTACCCAATCCAGTTGTNN

Coding sequence (CDS) from alignment at sc0000301:202711..206338-

>TCONS_00018577 ID=TCONS_00018577|Name=TCONS_00018577|organism=Clytia hemisphaerica|type=CDS|length=11400bp|location=Sequence derived from alignment at sc0000301:202711..206338- (Clytia hemisphaerica)
ATTATCTTCTCGACGCTTCTATTGGCAACCAGCTTATCCTTCGTCGTGAA
CGCATACAACTTTCTATTCATTAAACGTTACGCTATTTATATTTGGTTTG
CCATCGCTCCTCTCATATGGACAGTCTCAATTCTGATTGGGTCAGCCTTT
GTGACGTCATCCTACCAAAAGCTAAAACTAGTAGTCATGCAGTCATGGGT
AGAGATACCAGAGAAGTATGATGAGCTGTGGAGTAGACGAACTACCTCTA
ATAGAATCAATACAGCAGCATCTATAAGAAAACCCACCTTAGATTGGCGC
GCCGGTCTTGAAAACATGCGGCGTCGAAAGGCCGAACGCGAGGCCACCGA
ACACGCTGCTATGGAGGAGGAAGTTTTTGAGAAGGAAGATCTAAAAGAGA
ACTGTGTCGTTGATATTAACGAAGAGATGGTTAATGAACAGATCAATGTC
GATAAAGAAAACGAAAAGAAAGAAAGTGTGTTTTCAAAGACCGTTCGAAA
TATCAACCTTTTAAATAAATTCATCAAAGGTGCAAGCGACAAGAGTGCCG
ACGAGATCGAAATGGGAGCTGAAGAAGTTAGAAAATCACTCTATGACAAT
GTGGAACAACAAAAAGATACTTTGACTGTTGAGCAATCAGCGACAGGTGA
AGAAAGCTCGTACAAAAGTGGTGAAGAGTTTCGTGAGACCACGGAAACAG
GTGACCAGTTAACTGTCCCTTCTTCTGATGCTGCTCTTTACAGTGATAAT
CCCATTGTTAACGAACAAATACGTTTGAAAGAAGTGCAAGAATTGAGAAA
ACAGTCTATAGCCAGTGAAAACAAAGAAAACGACTCTTCGGCCTGGAAAA
AGATTCCGCGTATAAAATTTCGTAAAGCTACTAAACCAAACATTGAAATT
GATAGGACTAGGGAAGAAATATCCACGTTTGAAAAGGAGAACAGCAAAAA
CGACGAGGGGCCGCAAAGGACTAACAGCGTTAAATTCGATAAAGTGGTGC
GCCTTGCACAGCAAGTCAACAAGTTCACAGACAACACAAAAAGGCAACAA
ATAAGACGAAAGTTCAATTATGAAAAGTACATCAAATATCTGGAATTGAC
TTTAGATACTGTGGGATTTTCTTTGGGTAAAGTGACGATTACTTGGGACC
GCGTTTCTTTCTTTATCGTTCTTTTAATGACCCTGGTGGGTGTGTTTGCT
CAGAACGCATTCCTCAAGTAACACACATTGGGAACGAACTGAAAGCACAC
CCTCCGTCGATGACTTTCCAAGAAGCAGTAGACGATGTAGCAATGCGAAC
CAAATTGTTAAGAAGTGCTTCCGAAAATACCACGCTATCACCATATGCAA
TGTTTATACTCTCCGTCTCGGGGGCTGGGGCGCAGTATGGTTGCTATGCT
TACGATGATGCATTGACTGTCTCTTTCACAAAAGCAGGGCCAAACGGAAC
GAAAGTGGAATTGGTGCCTAATGCTGCTCACATTGTGATCAACGTTGCAC
GTTTCACAAGTCTCATGCACATTTATTATATGATGTTCTTGTTGTTAGGG
TTCGCTCTCATCATATTTTTCACAATAGTACACACGCAAAGACTCTTCAA
TGGGTCGGACGGTCACCTACGGAATGGGAAGACACCAGACGACAATAACA
ACAAAAGCAACACAAGCCTCAAGAATGGAGTTGGGGCCAAAGGTCTTCCA
AACTCACGACAGAAGCATCGAACGAAGCGAATACAGAGACGAAATAATGT
CAACATAAAGCATAGTTCTGCCGGTGAATTTGATGCCAATCAAGTCAAAC
GCTTCATATTCTTACAATCCCGTATTTACTGGCTTTCCTCTTTAATCGGT
GATCGACAAAGACCCTACAATTCCACCAAAGGAGTCTTGGGACTTATGTT
ATGGATATTCAATTTAACTATTCATTTCGCATTAGACTTTTATGAAGCGA
ATACAGTGTTTCATGTGAGTTGGGCTTCATCTATTGGTGTTTTCCTCGTC
ATGTTTATAATATCGACCATCTTTTTAATAAGACACACTGTTCGTTGGTT
CATCAAGACCTTGAAAAAGCTGTCAAAAGACAAAATATACTGCAAAACAT
TCGTTAAATTGAGTTTCATTTTCAAGAGATTTGACATAAAAAGAAAGCTT
GAGTGTGTAATTCATACAACCATGTTTGAGATTCACGAAGAAAAGGTTGG
CTTGTTACCTTCTCACAGTGAACAAGAGAAATGCTACAAAAAGCAAGTCA
CTTTCGATGATGACTTGTGCTGTAACGAAGATTATCTTCTCGACGCTTCT
ATTGGCAACCAGCTTATCCTTCGTCGTGAACGCATACAACTTTCTATTCA
TTAAACGTTACGCTATTTATATTTGGTTTGCCATCGCTCCTCTCATATGG
ACAGTCTCAATTCTGATTGGGTCAGCCTTTGTGACGTCATCCTACCAAAA
GCTAAAACTAGTAGTCATGCAGTCATGGGTAGAGATACCAGAGAAGTATG
ATGAGCTGTGGAGTAGACGAACTACCTCTAATAGAATCAATACAGCAGCA
TCTATAAGAAAACCCACCTTAGATTGGCGCGCCGGTCTTGAAAACATGCG
GCGTCGAAAGGCCGAACGCGAGGCCACCGAACACGCTGCTATGGAGGAGG
AAGTTTTTGAGAAGGAAGATCTAAAAGAGAACTGTGTCGTTGATATTAAC
GAAGAGATGGTTAATGAACAGATCAATGTCGATAAAGAAAACGAAAAGAA
AGAAAGTGTGTTTTCAAAGACCGTTCGAAATATCAACCTTTTAAATAAAT
TCATCAAAGGTGCAAGCGACAAGAGTGCCGACGAGATCGAAATGGGAGCT
GAAGAAGTTAGAAAATCACTCTATGACAATGTGGAACAACAAAAAGATAC
TTTGACTGTTGAGCAATCAGCGACAGGTGAAGAAAGCTCGTACAAAAGTG
GTGAAGAGTTTCGTGAGACCACGGAAACAGGTGACCAGTTAACTGTCCCT
TCTTCTGATGCTGCTCTTTACAGTGATAATCCCATTGTTAACGAACAAAT
ACGTTTGAAAGAAGTGCAAGAATTGAGAAAACAGTCTATAGCCAGTGAAA
ACAAAGAAAACGACTCTTCGGCCTGGAAAAAGATTCCGCGTATAAAATTT
CGTAAAGCTACTAAACCAAACATTGAAATTGATAGGACTAGGGAAGAAAT
ATCCACGTTTGAAAAGGAGAACAGCAAAAACGACGAGGGGCCGCAAAGGA
CTAACAGCGTTAAATTCGATAAAGTGGTGCGCCTTGCACAGCAAGTCAAC
AAGTTCACAGACAACACAAAAAGGCAACAAATAAGACGAAAGTTCAATTA
TGAAAAGTACATCAAATATCTGGAATTGACTTTAGATACTGTGGGATTTT
CTTTGGGTAAAGTGACGATTACTTGGGACCGCGTTTCTTTCTTTATCGTT
CTTTTAATGACCCTGGTGGGTGTGTTTGCTCAGAACGCATTCCTCAAGTA
ACACACATTGGGAACGAACTGAAAGCACACCCTCCGTCGATGACTTTCCA
AGAAGCAGTAGACGATGTAGCAATGCGAACCAAATTGTTAAGAAGTGCTT
CCGAAAATACCACGCTATCACCATATGCAATGTTTATACTCTCCGTCTCG
GGGGCTGGGGCGCAGTATGGTTGCTATGCTTACGATGATGCATTGACTGT
CTCTTTCACAAAAGCAGGGCCAAACGGAACGAAAGTGGAATTGGTGCCTA
ATGCTGCTCACATTGTGATCAACGTTGCACGTTTCACAAGTCTCATGCAC
ATTTATTATATGATGTTCTTGTTGTTAGGGTTCGCTCTCATCATATTTTT
CACAATAGTACACACGCAAAGACTCTTCAATGGGTCGGACGGTCACCTAC
GGAATGGGAAGACACCAGACGACAATAACAACAAAAGCAACACAAGCCTC
AAGAATGGAGTTGGGGCCAAAGGTCTTCCAAACTCACGACAGAAGCATCG
AACGAAGCGAATACAGAGACGAAATAATGTCAACATAAAGCATAGTTCTG
CCGGTGAATTTGATGCCAATCAAGTCAAACGCTTCATATTCTTACAATCC
CGTATTTACTGGCTTTCCTCTTTAATCGGTGATCGACAAAGACCCTACAA
TTCCACCAAAGGAGTCTTGGGACTTATGTTATGGATATTCAATTTAACTA
TTCATTTCGCATTAGACTTTTATGAAGCGAATACAGTGTTTCATGTGAGT
TGGGCTTCATCTATTGGTGTTTTCCTCGTCATGTTTATAATATCGACCAT
CTTTTTAATAAGACACACTGTTCGTTGGTTCATCAAGACCTTGAAAAAGC
TGTCAAAAGACAAAATATACTGCAAAACATTCGTTAAATTGAGTTTCATT
TTCAAGAGATTTGACATAAAAAGAAAGCTTGAGTGTGTAATTCATACAAC
CATGTTTGAGATTCACGAAGAAAAGGTTGGCTTGTTACCTTCTCACAGTG
AACAAGAGAAATGCTACAAAAAGCAAGTCACTTTCGATGATGACTTGTGC
TGTAACGAAGATTATCTTCTCGACGCTTCTATTGGCAACCAGCTTATCCT
TCGTCGTGAACGCATACAACTTTCTATTCATTAAACGTTACGCTATTTAT
ATTTGGTTTGCCATCGCTCCTCTCATATGGACAGTCTCAATTCTGATTGG
GTCAGCCTTTGTGACGTCATCCTACCAAAAGCTAAAACTAGTAGTCATGC
AGTCATGGGTAGAGATACCAGAGAAGTATGATGAGCTGTGGAGTAGACGA
ACTACCTCTAATAGAATCAATACAGCAGCATCTATAAGAAAACCCACCTT
AGATTGGCGCGCCGGTCTTGAAAACATGCGGCGTCGAAAGGCCGAACGCG
AGGCCACCGAACACGCTGCTATGGAGGAGGAAGTTTTTGAGAAGGAAGAT
CTAAAAGAGAACTGTGTCGTTGATATTAACGAAGAGATGGTTAATGAACA
GATCAATGTCGATAAAGAAAACGAAAAGAAAGAAAGTGTGTTTTCAAAGA
CCGTTCGAAATATCAACCTTTTAAATAAATTCATCAAAGGTGCAAGCGAC
AAGAGTGCCGACGAGATCGAAATGGGAGCTGAAGAAGTTAGAAAATCACT
CTATGACAATGTGGAACAACAAAAAGATACTTTGACTGTTGAGCAATCAG
CGACAGGTGAAGAAAGCTCGTACAAAAGTGGTGAAGAGTTTCGTGAGACC
ACGGAAACAGGTGACCAGTTAACTGTCCCTTCTTCTGATGCTGCTCTTTA
CAGTGATAATCCCATTGTTAACGAACAAATACGTTTGAAAGAAGTGCAAG
AATTGAGAAAACAGTCTATAGCCAGTGAAAACAAAGAAAACGACTCTTCG
GCCTGGAAAAAGATTCCGCGTATAAAATTTCGTAAAGCTACTAAACCAAA
CATTGAAATTGATAGGACTAGGGAAGAAATATCCACGTTTGAAAAGGAGA
ACAGCAAAAACGACGAGGGGCCGCAAAGGACTAACAGCGTTAAATTCGAT
AAAGTGGTGCGCCTTGCACAGCAAGTCAACAAGTTCACAGACAACACAAA
AAGGCAACAAATAAGACGAAAGTTCAATTATGAAAAGTACATCAAATATC
TGGAATTGACTTTAGATACTGTGGGATTTTCTTTGGGTAAAGTGACGATT
ACTTGGGACCGCGTTTCTTTCTTTATCGTTCTTTTAATGACCCTGGTGGG
TGTGTTTGCTCAGAACGCATTCCTCAAGTAACACACATTGGGAACGAACT
GAAAGCACACCCTCCGTCGATGACTTTCCAAGAAGCAGTAGACGATGTAG
CAATGCGAACCAAATTGTTAAGAAGTGCTTCCGAAAATACCACGCTATCA
CCATATGCAATGTTTATACTCTCCGTCTCGGGGGCTGGGGCGCAGTATGG
TTGCTATGCTTACGATGATGCATTGACTGTCTCTTTCACAAAAGCAGGGC
CAAACGGAACGAAAGTGGAATTGGTGCCTAATGCTGCTCACATTGTGATC
AACGTTGCACGTTTCACAAGTCTCATGCACATTTATTATATGATGTTCTT
GTTGTTAGGGTTCGCTCTCATCATATTTTTCACAATAGTACACACGCAAA
GACTCTTCAATGGGTCGGACGGTCACCTACGGAATGGGAAGACACCAGAC
GACAATAACAACAAAAGCAACACAAGCCTCAAGAATGGAGTTGGGGCCAA
AGGTCTTCCAAACTCACGACAGAAGCATCGAACGAAGCGAATACAGAGAC
GAAATAATGTCAACATAAAGCATAGTTCTGCCGGTGAATTTGATGCCAAT
CAAGTCAAACGCTTCATATTCTTACAATCCCGTATTTACTGGCTTTCCTC
TTTAATCGGTGATCGACAAAGACCCTACAATTCCACCAAAGGAGTCTTGG
GACTTATGTTATGGATATTCAATTTAACTATTCATTTCGCATTAGACTTT
TATGAAGCGAATACAGTGTTTCATGTGAGTTGGGCTTCATCTATTGGTGT
TTTCCTCGTCATGTTTATAATATCGACCATCTTTTTAATAAGACACACTG
TTCGTTGGTTCATCAAGACCTTGAAAAAGCTGTCAAAAGACAAAATATAC
TGCAAAACATTCGTTAAATTGAGTTTCATTTTCAAGAGATTTGACATAAA
AAGAAAGCTTGAGTGTGTAATTCATACAACCATGTTTGAGATTCACGAAG
AAAAGGTTGGCTTGTTACCTTCTCACAGTGAACAAGAGAAATGCTACAAA
AAGCAAGTCACTTTCGATGATGACTTGTGCTGTAACGAAGATTATCTTCT
CGACGCTTCTATTGGCAACCAGCTTATCCTTCGTCGTGAACGCATACAAC
TTTCTATTCATTAAACGTTACGCTATTTATATTTGGTTTGCCATCGCTCC
TCTCATATGGACAGTCTCAATTCTGATTGGGTCAGCCTTTGTGACGTCAT
CCTACCAAAAGCTAAAACTAGTAGTCATGCAGTCATGGGTAGAGATACCA
GAGAAGTATGATGAGCTGTGGAGTAGACGAACTACCTCTAATAGAATCAA
TACAGCAGCATCTATAAGAAAACCCACCTTAGATTGGCGCGCCGGTCTTG
AAAACATGCGGCGTCGAAAGGCCGAACGCGAGGCCACCGAACACGCTGCT
ATGGAGGAGGAAGTTTTTGAGAAGGAAGATCTAAAAGAGAACTGTGTCGT
TGATATTAACGAAGAGATGGTTAATGAACAGATCAATGTCGATAAAGAAA
ACGAAAAGAAAGAAAGTGTGTTTTCAAAGACCGTTCGAAATATCAACCTT
TTAAATAAATTCATCAAAGGTGCAAGCGACAAGAGTGCCGACGAGATCGA
AATGGGAGCTGAAGAAGTTAGAAAATCACTCTATGACAATGTGGAACAAC
AAAAAGATACTTTGACTGTTGAGCAATCAGCGACAGGTGAAGAAAGCTCG
TACAAAAGTGGTGAAGAGTTTCGTGAGACCACGGAAACAGGTGACCAGTT
AACTGTCCCTTCTTCTGATGCTGCTCTTTACAGTGATAATCCCATTGTTA
ACGAACAAATACGTTTGAAAGAAGTGCAAGAATTGAGAAAACAGTCTATA
GCCAGTGAAAACAAAGAAAACGACTCTTCGGCCTGGAAAAAGATTCCGCG
TATAAAATTTCGTAAAGCTACTAAACCAAACATTGAAATTGATAGGACTA
GGGAAGAAATATCCACGTTTGAAAAGGAGAACAGCAAAAACGACGAGGGG
CCGCAAAGGACTAACAGCGTTAAATTCGATAAAGTGGTGCGCCTTGCACA
GCAAGTCAACAAGTTCACAGACAACACAAAAAGGCAACAAATAAGACGAA
AGTTCAATTATGAAAAGTACATCAAATATCTGGAATTGACTTTAGATACT
GTGGGATTTTCTTTGGGTAAAGTGACGATTACTTGGGACCGCGTTTCTTT
CTTTATCGTTCTTTTAATGACCCTGGTGGGTGTGTTTGCTCAGAACGCAT
TCCTCAAGTAACACACATTGGGAACGAACTGAAAGCACACCCTCCGTCGA
TGACTTTCCAAGAAGCAGTAGACGATGTAGCAATGCGAACCAAATTGTTA
AGAAGTGCTTCCGAAAATACCACGCTATCACCATATGCAATGTTTATACT
CTCCGTCTCGGGGGCTGGGGCGCAGTATGGTTGCTATGCTTACGATGATG
CATTGACTGTCTCTTTCACAAAAGCAGGGCCAAACGGAACGAAAGTGGAA
TTGGTGCCTAATGCTGCTCACATTGTGATCAACGTTGCACGTTTCACAAG
TCTCATGCACATTTATTATATGATGTTCTTGTTGTTAGGGTTCGCTCTCA
TCATATTTTTCACAATAGTACACACGCAAAGACTCTTCAATGGGTCGGAC
GGTCACCTACGGAATGGGAAGACACCAGACGACAATAACAACAAAAGCAA
CACAAGCCTCAAGAATGGAGTTGGGGCCAAAGGTCTTCCAAACTCACGAC
AGAAGCATCGAACGAAGCGAATACAGAGACGAAATAATGTCAACATAAAG
CATAGTTCTGCCGGTGAATTTGATGCCAATCAAGTCAAACGCTTCATATT
CTTACAATCCCGTATTTACTGGCTTTCCTCTTTAATCGGTGATCGACAAA
GACCCTACAATTCCACCAAAGGAGTCTTGGGACTTATGTTATGGATATTC
AATTTAACTATTCATTTCGCATTAGACTTTTATGAAGCGAATACAGTGTT
TCATGTGAGTTGGGCTTCATCTATTGGTGTTTTCCTCGTCATGTTTATAA
TATCGACCATCTTTTTAATAAGACACACTGTTCGTTGGTTCATCAAGACC
TTGAAAAAGCTGTCAAAAGACAAAATATACTGCAAAACATTCGTTAAATT
GAGTTTCATTTTCAAGAGATTTGACATAAAAAGAAAGCTTGAGTGTGTAA
TTCATACAACCATGTTTGAGATTCACGAAGAAAAGGTTGGCTTGTTACCT
TCTCACAGTGAACAAGAGAAATGCTACAAAAAGCAAGTCACTTTCGATGA
TGACTTGTGCTGTAACGAAGATTATCTTCTCGACGCTTCTATTGGCAACC
AGCTTATCCTTCGTCGTGAACGCATACAACTTTCTATTCATTAAACGTTA
CGCTATTTATATTTGGTTTGCCATCGCTCCTCTCATATGGACAGTCTCAA
TTCTGATTGGGTCAGCCTTTGTGACGTCATCCTACCAAAAGCTAAAACTA
GTAGTCATGCAGTCATGGGTAGAGATACCAGAGAAGTATGATGAGCTGTG
GAGTAGACGAACTACCTCTAATAGAATCAATACAGCAGCATCTATAAGAA
AACCCACCTTAGATTGGCGCGCCGGTCTTGAAAACATGCGGCGTCGAAAG
GCCGAACGCGAGGCCACCGAACACGCTGCTATGGAGGAGGAAGTTTTTGA
GAAGGAAGATCTAAAAGAGAACTGTGTCGTTGATATTAACGAAGAGATGG
TTAATGAACAGATCAATGTCGATAAAGAAAACGAAAAGAAAGAAAGTGTG
TTTTCAAAGACCGTTCGAAATATCAACCTTTTAAATAAATTCATCAAAGG
TGCAAGCGACAAGAGTGCCGACGAGATCGAAATGGGAGCTGAAGAAGTTA
GAAAATCACTCTATGACAATGTGGAACAACAAAAAGATACTTTGACTGTT
GAGCAATCAGCGACAGGTGAAGAAAGCTCGTACAAAAGTGGTGAAGAGTT
TCGTGAGACCACGGAAACAGGTGACCAGTTAACTGTCCCTTCTTCTGATG
CTGCTCTTTACAGTGATAATCCCATTGTTAACGAACAAATACGTTTGAAA
GAAGTGCAAGAATTGAGAAAACAGTCTATAGCCAGTGAAAACAAAGAAAA
CGACTCTTCGGCCTGGAAAAAGATTCCGCGTATAAAATTTCGTAAAGCTA
CTAAACCAAACATTGAAATTGATAGGACTAGGGAAGAAATATCCACGTTT
GAAAAGGAGAACAGCAAAAACGACGAGGGGCCGCAAAGGACTAACAGCGT
TAAATTCGATAAAGTGGTGCGCCTTGCACAGCAAGTCAACAAGTTCACAG
ACAACACAAAAAGGCAACAAATAAGACGAAAGTTCAATTATGAAAAGTAC
ATCAAATATCTGGAATTGACTTTAGATACTGTGGGATTTTCTTTGGGTAA
AGTGACGATTACTTGGGACCGCGTTTCTTTCTTTATCGTTCTTTTAATGA
CCCTGGTGGGTGTGTTTGCTCAGAACGCATTCCTCAAGTAACACACATTG
GGAACGAACTGAAAGCACACCCTCCGTCGATGACTTTCCAAGAAGCAGTA
GACGATGTAGCAATGCGAACCAAATTGTTAAGAAGTGCTTCCGAAAATAC
CACGCTATCACCATATGCAATGTTTATACTCTCCGTCTCGGGGGCTGGGG
CGCAGTATGGTTGCTATGCTTACGATGATGCATTGACTGTCTCTTTCACA
AAAGCAGGGCCAAACGGAACGAAAGTGGAATTGGTGCCTAATGCTGCTCA
CATTGTGATCAACGTTGCACGTTTCACAAGTCTCATGCACATTTATTATA
TGATGTTCTTGTTGTTAGGGTTCGCTCTCATCATATTTTTCACAATAGTA
CACACGCAAAGACTCTTCAATGGGTCGGACGGTCACCTACGGAATGGGAA
GACACCAGACGACAATAACAACAAAAGCAACACAAGCCTCAAGAATGGAG
TTGGGGCCAAAGGTCTTCCAAACTCACGACAGAAGCATCGAACGAAGCGA
ATACAGAGACGAAATAATGTCAACATAAAGCATAGTTCTGCCGGTGAATT
TGATGCCAATCAAGTCAAACGCTTCATATTCTTACAATCCCGTATTTACT
GGCTTTCCTCTTTAATCGGTGATCGACAAAGACCCTACAATTCCACCAAA
GGAGTCTTGGGACTTATGTTATGGATATTCAATTTAACTATTCATTTCGC
ATTAGACTTTTATGAAGCGAATACAGTGTTTCATGTGAGTTGGGCTTCAT
CTATTGGTGTTTTCCTCGTCATGTTTATAATATCGACCATCTTTTTAATA
AGACACACTGTTCGTTGGTTCATCAAGACCTTGAAAAAGCTGTCAAAAGA
CAAAATATACTGCAAAACATTCGTTAAATTGAGTTTCATTTTCAAGAGAT
TTGACATAAAAAGAAAGCTTGAGTGTGTAATTCATACAACCATGTTTGAG
ATTCACGAAGAAAAGGTTGGCTTGTTACCTTCTCACAGTGAACAAGAGAA
ATGCTACAAAAAGCAAGTCACTTTCGATGATGACTTGTGCTGTAACGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010385XLOC_010385Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018577-exon-sc0000301-1575043694:206183..206338TCONS_00018577-exon-sc0000301-1575043694:206183..206338Clytia hemisphaericaexon
TCONS_00018577-exon-sc0000301-1575043694:205568..206091TCONS_00018577-exon-sc0000301-1575043694:205568..206091Clytia hemisphaericaexon
TCONS_00018577-exon-sc0000301-1575043694:204985..205252TCONS_00018577-exon-sc0000301-1575043694:204985..205252Clytia hemisphaericaexon
TCONS_00018577-exon-sc0000301-1575043694:204423..204535TCONS_00018577-exon-sc0000301-1575043694:204423..204535Clytia hemisphaericaexon
TCONS_00018577-exon-sc0000301-1575043694:202711..204271TCONS_00018577-exon-sc0000301-1575043694:202711..204271Clytia hemisphaericaexon
TCONS_00018577-exon-sc0000301-1510915933:206183..206338TCONS_00018577-exon-sc0000301-1510915933:206183..206338Clytia hemisphaericaexon
TCONS_00018577-exon-sc0000301-1510915933:205568..206091TCONS_00018577-exon-sc0000301-1510915933:205568..206091Clytia hemisphaericaexon
TCONS_00018577-exon-sc0000301-1510915933:204985..205252TCONS_00018577-exon-sc0000301-1510915933:204985..205252Clytia hemisphaericaexon
TCONS_00018577-exon-sc0000301-1510915933:204423..204535TCONS_00018577-exon-sc0000301-1510915933:204423..204535Clytia hemisphaericaexon
TCONS_00018577-exon-sc0000301-1510915933:202711..204271TCONS_00018577-exon-sc0000301-1510915933:202711..204271Clytia hemisphaericaexon
TCONS_00018577-exon-sc0000301-1491911889:206183..206338TCONS_00018577-exon-sc0000301-1491911889:206183..206338Clytia hemisphaericaexon
TCONS_00018577-exon-sc0000301-1491911889:205568..206091TCONS_00018577-exon-sc0000301-1491911889:205568..206091Clytia hemisphaericaexon
TCONS_00018577-exon-sc0000301-1491911889:204985..205252TCONS_00018577-exon-sc0000301-1491911889:204985..205252Clytia hemisphaericaexon
TCONS_00018577-exon-sc0000301-1491911889:204423..204535TCONS_00018577-exon-sc0000301-1491911889:204423..204535Clytia hemisphaericaexon
TCONS_00018577-exon-sc0000301-1491911889:202711..204271TCONS_00018577-exon-sc0000301-1491911889:202711..204271Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018577-proteinTCONS_00018577-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000301supercontigsc0000301:202711..206338 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0378481 0.23887 0.102764 0.249173 1.47771 0.306512 3.34374 5.51663e-06 0.874968 2.37304 6.7894 1.10053 1.03646 0 0.477251 0 0.433635 1.88829 3.4211 2.38922 2.4706 2.6166 2.32946 0 0.000388884 2.27844 3.08012 5.26877 0.728892 1.17498
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00018577 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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