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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018561 ID=TCONS_00018561|Name=TCONS_00018561|organism=Clytia hemisphaerica|type=transcript|length=1893bp
TGGAACTTCGTAAAACAGTTGAAACTACATAAAAGCTCTGATTGGATAAA
ATCCAATAATATTCCTAGAAATCGAAGGTCAACCACCTTGGTCACCGGTT
GTCCCCTACAAAAATCAACTGACGTTGCCATCCAAAGAACGACTAAGTGC
TAGTACGCAAGACTTACGAAATGGTAACATGTTAAAATACTATGATGGAT
ATCCTCAAGAGAACCACAAGAATCATAATtacattgaaacaaatgaaTCA
CTTATTAAAGAAGAAGATTTGATTCGGATCAACGTCTGTGGAATGATTTA
TGAGACTTTGCGAAGCACCCTCCAAAGATTCCCAGATACGTTACTTGGTG
ACAAAAGTCGATTGGATTTGTACTATGTTAAATCAAgagatttttattat
tttgataagAACAGACAAGCTTTTGAAGCCATTCTGTATTATTACCAAAC
AGGTGGCATTTTGATTCGGCCGCCCAACATTCCCATGCCGTTGTTCGCAG
AGGAGGTGGCCTTCTTTGACCTTGGTGAAAGTGTCTTTATGCAGTTACAA
AAAGAGGAAGGTTACATATCTGACCAAGAACGCGTCTTACCGACGAACGA
GCTTCAACGGAAAGTGTGGGAGTTGTTCGAATTCCCTGATTCTAGTCAAG
CAGCACGCATCCTTGCAACATGGTCCGTTCTCGTTATCATCTTATCCATC
ACTGTTTTTTGTTTGGAAACTTTGCCACAATACTCAGTGAACAACAACAA
GCCTCTGACGACTGCTGCACCTTCAGGGAATGTTACAAACGGTACGCTCT
CTGCAACTCCGAGTAAAAGTGAAGGTGAAATGTACCGTCAACCATGGTTT
TCCTTTGAATTAGGCTGCATCATTTGGTTTTCCTTTGAATATCTGGTGCG
CCTTCTCTCATCCCCATCCAAATGGCAATTTGCCAAATCCTTTCTTAACA
CCATCGATTTATTGGCCATCCTTCCTTATTTCATCACCCTATCCATCAAT
TCGGAGAACACCACACCGCTATCCGTTCTTCGGGTGGTCCGGTTGGTTCG
TGTCTTCCGTATCTTCAAATTGTCCAGACATTCACTTGGCTTGCGTATCT
TGGGACACACATTACGAGCGAGTATCAGTGAATTGGGCATGTTGATATTC
TTTCTGTGTCTTGGTGTCATTCTGTTTTCCAGTGCCATATTCTATGCGGA
ACAAGGAATGAATGATCAATTCCAAAGCATTCCCGATGCGTTTTGGTACA
GTCTAGTCACCATGACAACCGTTGGATACGGAGACAAAGTTCCCAAAACA
TTACCTGGGAAATTTGTTGGAAGTCTTTGTGCGATCGTTGGCGTGTTGAC
AATTGCATTGCCAGTACCGGTTATTGTGTccaattttgagtttttttaca
AGCGTGATCGGATGACGTTCGAAAGGAGCAAGTATAACACACCGTCGGAG
AATCAATCCAAACGACAATCACCTGATCAATCGCCTCAAAGCAATCATAA
AGAGAACAACATCAATCATAATCACAACGAAGATCCTCTCTTGACAACTA
CTGTTATGTAAACTTGTTATCACGAGAGAGCTCCCGCTACATGGTGATTC
ATGAGTTTTTGTGGCTGCGTAAATAAGAGGAGGTAAACCATATGGTGATT
GGGTTACCTAAATCCGTTCGGTATAGAAAGAACACTTTCACTGAAATAGA
GatcattaaaattgatgatttaGACAGATGCTGATCGCCAAGTTTTAAct
tttaattgtttttcttaATGAAAGTCAATGCTGTTAGGTCTTAGCGAATC
TTCACTGCAAGTGGTGTCTTTCGATTCCTTGTAATAACAGGAGAAAAGTC
TTTAACAAGCAAGTGTTTGAAAACTTAATGTTGTCATCTTCNN Run BLAST on NCBI transcript from alignment at sc0000301:340324..350921+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018561 ID=TCONS_00018561|Name=TCONS_00018561|organism=Clytia hemisphaerica|type=transcript|length=10598bp|location=Sequence derived from alignment at sc0000301:340324..350921+ (Clytia hemisphaerica)
TGGAACTTCGTAAAACAGTTGAAACTACATAAAAGCTCTGATTGGATAAA
ATCCAATAATATTCCTAGAAATCGAAGGTAAGCTTAGTTTTTCACCATGT
ATTTCGAGGCTGAAATTATCCAAGCTATCCCCTTTAAGATGAATATCTCT
TCCCATTAGTTGATGTTGGTTTGATTCTCACTTTGCTCTTAAGGTCGGCT
TCATTCCTTACCACCTTAAAAACGTTGTGCTTCAATATGCAATGTCTAAA
TGATTCTTTCTGTTGTTTTCTCGATGatcaattaaaaaaagaagccaTCA
AGTTCTTGTTCCTATACTGTATGTATACGATTTcgtatttgattttcaaa
tacaaaactCGGTTTCAATATTCTATTAGTTCTTTTAGGCTTGTTTTATT
AAACCAATTAGTTCTTTTGGCTATTTGGAACCTGGAATCGTTAAAAGtga
gaacaaaataaaaataattcgatTACGCTCACCGAGTTTTGAATACAATT
CTATTTTCTTCTGATTGGATTTCCAATCTGGTGATATATTTTAAACTTAA
AAGAATCTCAAgggtttttgtttgtttgtttgtttgtttgcttgcttATC
TTGAAGGTTTAGCTTTTGGGTGGTTTATACTTCAGAAGAGCAAGTGAGTT
AGAGTAATGTTTTGCAGTATGTTGTCACGTTCAAGATGTCAACTGAATGC
TTCTACACCAAATTTTTGTGAGGATATTTCTTATTTATACTTATTGTACA
ATTTTAAACTAAATATATGTAAAGTTCTCTCTAAAGAAGGTCAGAgggat
aatatttttttactttttacttgaCTAAACACTTTTACCCTAGTAAGTGG
CGACACAAGGTTTCAGATTAgaaaaaatgccaataaaatgTCAGCACCCT
CTCTTTTCATTCAAAAGTTTAAGCTAGCTAGGTtagggagcggtcataaa
gtatctactagaggggggtggaggatattttgaaaaatccaaaaaaaatt
tcgcacaCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtgaaaatattaaac
tgtaagagcagtatggttgaaagtaacgcccggaatctttgagtcaagaa
acttggaatttgctttttgtaatttgaaatgttaagTAGCAGATGCtaag
gaggcacaaccatggtttgcgccgacgggcgaaaatttcaatatttttca
gcaccattttagctaaaagacactttgttttgacaaatttcttttaagaa
gtactttttcaaaccactctgatgagctgcgagagccactaatctacttc
cctcacttagctcaatgttacaaaccagatgatgcccaaataatggCAAT
ATGAAATGTACATATATCCAATAAGATAAATTATGAGTTGTCGGCCGTAA
GGCCGAAAAATTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNggtagcgaaaacttaggggaaactgttaggtttttgag
acttgcctTAAGTCACTCGAGGTTTTGAGATGGAGGGAGATATGTTCATC
TTATTTGGTCATTGGTAGGAACTCTCTACTCATTTCTTCACTTAGTGTGA
AATATATTGGACATAAATTCGCCCTCTTCGCAGATTATTCttcaaagtct
tttcaaaaaatggcaGAATGAAGAGAAGAAAGATAGATAAACAAAAGCCC
TATAGATCGTAGAATCCTAAATGTGGCAAAATCTGTGTTTTTCCCCTTTT
GCGTTTTTCTTTCGAAGTTTTTTCTATTTGAATGATGTTGGTCCTGTAGA
CGGTTTGGTAGGCTAGATCGTGAAGGCTTTTCTCAGTTTTCTGTGGAGAG
GAGAAAATGCATCACCATCGATCTCTCAACAACCTGATGATGCAACCTAA
ACCCGGTAATAACCTTCTTTTCAAACCAATTCTCAAAATCGTCTTTCTTA
TAATTGGCTTTGCCTTACACTCTTCTTTTTGAATCTCCCAATCACGATTC
AGCAATTCTTTTCTGATCTAATTCAGACTCCATACCACAAATAAAAGAAg
agcaatatattttttaacatATTAACCCCTGTCTCCCTGGTCCGATGAGA
ATAATTTGCCACCAGTATGAAATCAATGAGCAAACACGTGCAAAAACCAA
TTGGGGATGTTTTCTCTTCACCATTAGggtgtaatttttaaaaagtgtag
CTTTTCAATCATGAAATCTCGAGTTGCTTTTTCACCGCAACGATTATTTG
GGCGACTTTATTTTTCCAGCGGGTACAGATGTCGGTCAGTGCCTTTGATA
CAGGGGTGGATATGTaattaaaactgtttttattgATATAATTATATAAA
GTTAATAATAGCGATGGCTTTTTTCAACGTCGTGAGTCATGTTTTGATGT
cgaaaagaagagagaaaaaaagcGACGAAGAGACGAATGGTAAGAGAAGT
TCAACACTTGTCCGAGTTCAATATTTTACGGTATTGCCCGAAGAAACAGT
ttatgactttttaaagtagattcttttgtgtttaatAACACTCAATAATA
ACACCCATAAATATATCTATTTCGTTTATTCTAACACCATTGGTATTCCA
TGAGCCCGGAACTTTTTATTGGACTGACCTTCGATGACCTTCTCTAAAAT
ATAAGTTTAATATTCGTTTAATTTTTTACAGTTTACACGGGTAGCCAACT
CGGTTATAATGCGGACCAAATGGGAACATTGCAAGGTTggtgtttcagaa
aaaaactcttAATGACAAGGTTGCCAAGGTTACCCCTCGAATAATCATCA
GTTCCGAagtttttaaaagttcaacTCGTTCaacaaagtaaattttttga
gtGATCGCAAAGATGAATAATTATGTAATGCAATAAAACCTATAAAAGGc
agacactcaattagcggaccctctgattggTGGACCCTCGGACAAATTCT
TTTGCACGAAATTGCAAAAACCCCTATTTTCGCTCTCCAATTAGCGAGAA
TCGAATATCAAACTGGTCAcagattttttctttgaagCACGTATTAGTTT
TATTATCCAAAttagttttaaaagttttaagtttTCTCTTGACCCATTCG
ACGAATTTAGCCGGGCCAACGAAATCATAAACGCTTGCACTTCAACCCCC
AGCCATCAGCTAGATTCAACCTTTTCCCAGTAGCTCGAGCTCTGGTTCCG
GTATTCTGTTCGAATGATTgctacaatatttttttttcaactatGTTATC
TGGTTCATGTTTGCAAACTAGTGATTTCCCCTATGAACGGAGTCCAAATC
TGACGATCCCTTTCTACCTTTCTTGTAAGTACGGTACCCTCTGACTTTCA
AGTTAATCTTGTTCAACTTCTATTTTTGTGTTATATTATATTTCTATAGA
CATTCTTTAAATCGTGAAAATTAAATTGTTGCGTCTCAAtaacctttctc
ttgttcttctatgTCCTAGTGTCCTGCACAAGTTCTAAAGACTCCCttac
accctgggatggcctaatttcaaaattggagctcttagatgaaaaagttc
taaaatttgGACGCTTCTAGTTAGCGGACGTTTCTCCGGTGGTatccgct
aattagaggctcCATCGGTGTCAAGTCAATGTAGAAGAGGGGTTAGAAAA
CGATTTTTCTAATCTTCTggagaaaaaaagacaaatgaatCAATTTTACT
TGAACAGGAAAAAAGAGATGTgagagaaaaaagttttttatttgagggTT
GATCGTGGTTGTGGTCATCTTTCGACCGCATGTTTTACGGTTTTTTGTGT
TCGAAGGGTTTTAAAAACGTTGACAGAAAATGAGATAAAAAGAGCGaagt
agaaaaaagaaaaaagaatggaGAAAAGGAATCATCAAGCAGAATGGAAA
TTGGAAAATATGTGGAAAGTTTTTCTGTTaagaaaatagataaaaattgT
TGTTGATGTTagtttataaaacaaaaaaaatcatgaagATTTTCCTTTCG
AACTAATTAGAATGTCATTCTTTAGAAACGCCTTTCGAGAAGTATCTTTG
ATTTTCACAGCTCAAAGTTTTCTTTTGACTTTTAGGAAGTCACAGTCTTT
TTGTCTTCTGTTTTTGCAGTTAACTTCTTTTTTGGTGATATTTCTACTGT
ATGATCTCTAATATCTTGGGGAGCAACATGCTGCTATTTAAAATGATTAC
TATCCCTTCCTAAACAAAATAGTTATTGATTGGAAACACATCAAATCGAA
ATCCAATTTCAGTATATAGATTCCTAGCTGGTAAACATTTCAAACGTTGT
ATATGGGCgtattttgttgttattttaTGGGCGTATGGGGGTGGGGTAag
gggatgtgccgctggtccAGGTAACTTAGGAAGTgttcataaagtatcta
ctagaagggggtggaggatttttccaaaaatcggaaaaaaaattcgcACC
CCTATGTTCAAAGATTTTTCGAACCTCCCCCTTAACCAAGCCAAAAactt
ttcccccccccccccttaaccaagccaaaaacttttccccccccccccct
taaccaagccaaaaacttttcccccccccccccttaaccAAGCCAATAAC
TTTTCTCACCCCCTCCCCTccctaagaaaattttttaataaataccCCCC
TCTCGTGCAATCCTTGCCTTGTTCATAAGTTAGATGAAAGTTGCTGAAAT
GTGAAATTGGATTTCAAACATCGCTTCCGGAACTTTACAATCTCATTTAT
ATCCTTTAATTTTTGTCTGttctttttgggaaattttatCGTAGCGAGTG
TTATAACTGAGGCGCAACCGTTTTGCGccgacaaagaaaattttaaaatt
ttaacccTCTCATTTAGCTAGGTGACCCTAGGTGCTTCCTGTTAGTGCGA
GAGTTATTGAAAACAAGACTAAGATTTCAAGCTATATTActtaaaaattg
agatttttgcaGCATGCAAAGACCATATATGCAAAGACAAATAATAGATT
ATGATTGGtgtaaagttttaaagaaaagttttcaaaaaaggcTCTGATAA
ATGGTTGAAAAACACTTGATTTTTGAATCAACCTGGTGGGATGTCAAAac
aatttccccccccccccctaaagaTAAGATGgcaaaaaattatctttcac
CGTACCTTTTTTTTCTGGCACTTTACTAATGATTTTTTTAGCACGGGTGA
AAAGAAATCAGCAACGTGTATTTGACAGACCTCCCTGTTGAACTGGTTGT
GTTTAATCATTCTTTTCTGTGATTTTCCCTTTCAACCTGGAAAAGGGTGA
TGATATGGCTCTAAACGAACCTTTTCAATATTTGGCCACTTTCAGGAAAT
TCTAATTCAAAAGCTGATATCGatagcaaaaataagaaaaaagcgaaaat
gaaaagttgaaagaaaaataaaatcgaaCTGGAAGAGAAATATAGAATTT
catctttttgtactttttttttGTACTTTCTTTTCTTCTGAAGGGAATAT
ATTTCCCTATATATATCGTACTTTTCTCTAGCAAtgggatttgaaaataa
tataacttttttgggacttttcttttttctttttccaatttCAGCCGTTT
TTTCTTTCGATTTACACCTTCCATCGAAttacttttttcttgaaaaccGT
TTGTTTGGGGAAGAAATTGGTTAATGAAAAAAGCCCCCACTCGACAAAGA
AACGTGAGGAAAAAACACTTTAATAGGATTGATATAGCGAAAAGaagttt
taaataaataaacataaatTTGATAACAAGAAAGCCTGTTTCTAATAAGC
AGATGGCAGcattaaaaacaaacattttatcCAACTTTGGATACTGTTTC
TACAATCGCCTTTCCTTACATCTTTATGTGCCTGCTATATCTTATGTAAA
GACGTGAGGAAAGTTTGAGAGAGAAAATGAACGAGAGCTTGTTGAAAGGT
GAATGAAGGGTAATCCCTCTTTTGGCCTTCTTTCTTATTTACTCCTTCTC
CTAGTTGAAACTTGACTCGAATTGTTATCAAATCAAACATGGAAGGATCA
TTTCATAGTTTCACTTCATTAAATCatcttttttcattcttttatttcgt
ttttcttcctttttaaaaatattgttcctcgaacaaaaacttttcattta
cGATTTGATGAAGGACAAAATAAGTTTATTCACCCTCTACCCGAACaaga
acaaatttctagttGACTGTGTTTTCAACCTGATGTTCTTTTCACTTAAC
ACCCTATGCTAGATATTTCCCCATTATGCAAACTATCCCTATTTATTCAT
TCTAAGTACTAATGAACTTTGTCTTTTTTCGAGCcttgatgttttttttc
ctCTTCAATTTTGAGATGATTTTTTGCGTTCAAATTAGAAGGAAGatatt
tgagcaaattttattattttaacacGGGAAATTAGAATAGAATGGTTGCT
GACTTTTAAGGTGAAGATTAGATGACCTTTTACAAGTTTGATCAGGTTTA
TCAAATATTTAGGTGCTTTGTAAGGGTCAAAGGTTGGCAAATCTGTCGAT
TATGTTTGGATTCAAAAGAATTCGTGTGTCCTTCTTTAAAATCTATGTTG
AGAGAAAAGACTTCACGACCTTGAGCTCAAACCATATTGGCCTGTTCTTA
GACGATTTTAAGCATTCAGTTTGAGTAGTTGACACATCGTACATTATTTC
GGTTCCTTTCTACCTTTCTTGCGTTTGTTTGATCTACATTCGAAATAACA
TTCtaagttttgtatttttcttcatCGTTCAGGTCAACCACCTTGGTCAC
CGGTTGTCCCCTACAAAAATCAACTGACGTTGCCATCCAAAGAACGACTA
AGTGCTAGTACGCAAGACTTACGAAATGGTAACATGTTAAAATACTATGA
TGGATATCCTCAAGAGAACCACAAGAATCATAATtacattgaaacaaatg
aaTCACTTATTAAAGAAGAAGATTTGATTCGGATCAACGTCTGTGGAATG
ATTTATGAGACTTTGCGAAGCACCCTCCAAAGATTCCCAGATACGTTACT
TGGTGACAAAAGTCGATTGGATTTGTACTATGTTAAATCAAgagattttt
attattttgataagAACAGACAAGCTTTTGAAGCCATTCTGTATTATTAC
CAAACAGGTGGCATTTTGATTCGGCCGCCCAACATTCCCATGCCGTTGTT
CGCAGAGGAGGTGGCCTTCTTTGACCTTGGTGAAAGTGTCTTTATGCAGT
TACAAAAAGAGGAAGGTTACATATCTGACCAAGAACGCGTCTTACCGACG
AACGAGCTTCAACGGAAAGTGTGGGAGTTGTTCGAATTCCCTGATTCTAG
TCAAGCAGCACGCATCCTTGCAACATGGTCCGTTCTCGTTATCATCTTAT
CCATCACTGTTTTTTGTTTGGAAACTTTGCCACAATACTCAGTGAACAAC
AACAAGCCTCTGACGACTGCTGCACCTTCAGGGAATGTTACAAACGGTAC
GCTCTCTGCAACTCCGAGTAAAAGTGAAGGTGAAATGTACCGTCAACCAT
GGTTTTCCTTTGAATTAGGCTGCATCATTTGGTTTTCCTTTGAATATCTG
GTGCGCCTTCTCTCATCCCCATCCAAATGGCAATTTGCCAAATCCTTTCT
TAACACCATCGATTTATTGGCCATCCTTCCTTATTTCATCACCCTATCCA
TCAATTCGGAGAACACCACACCGCTATCCGTTCTTCGGGTGGTCCGGTTG
GTTCGTGTCTTCCGTATCTTCAAATTGTCCAGACATTCACTTGGCTTGCG
TATCTTGGGACACACATTACGAGCGAGTATCAGTGAATTGGGCATGTTGA
TATTCTTTCTGTGTCTTGGTGTCATTCTGTTTTCCAGTGCCATATTCTAT
GCGGAACAAGGAATGAATGATCAATTCCAAAGCATTCCCGATGCGTTTTG
GTACAGTCTAGTCACCATGACAACCGTTGGATACGGAGACAAAGTTCCCA
AAACATTACCTGGGAAATTTGTTGGAAGTCTTTGTGCGATCGTTGGCGTG
TTGACAATTGCATTGCCAGTACCGGTTATTGTGTccaattttgagttttt
ttacaAGCGTGATCGGATGACGTTCGAAAGGAGCAAGTATAACACACCGT
CGGAGAATCAATCCAAACGACAATCACCTGATCAATCGCCTCAAAGCAAT
CATAAAGAGAACAACATCAATCATAATCACAACGAAGATCCTCTCTTGAC
AACTACTGTTATGTAAACTTGTTATCACGAGAGAGCTCCCGCTACATGGT
GATTCATGAGTTTTTGTGGCTGCGTAAATAAGAGGAGGTAAACCATATGG
TGATTGGGTTACCTAAATCCGTTCGGTATAGAAAGAACACTTTCACTGAA
ATAGAGatcattaaaattgatgatttaGACAGATGCTGATCGCCAAGTTT
TAActtttaattgtttttcttaATGAAAGTCAATGCTGTTAGGTCTTAGC
GAATCTTCACTGCAAGTGGTGTCTTTCGATTCCTTGTAATAACAGGAGAA
AAGTCTTTAACAAGCAAGTGTTTGAAAACTTAATGTTGTCATCTTCNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018561-exon-sc0000301-1491911889:340324..340400 | TCONS_00018561-exon-sc0000301-1491911889:340324..340400 | Clytia hemisphaerica | exon |
| TCONS_00018561-exon-sc0000301-1510915933:340324..340400 | TCONS_00018561-exon-sc0000301-1510915933:340324..340400 | Clytia hemisphaerica | exon |
| TCONS_00018561-exon-sc0000301-1575043694:340324..340400 | TCONS_00018561-exon-sc0000301-1575043694:340324..340400 | Clytia hemisphaerica | exon |
| TCONS_00018561-exon-sc0000301-1491911889:349106..350921 | TCONS_00018561-exon-sc0000301-1491911889:349106..350921 | Clytia hemisphaerica | exon |
| TCONS_00018561-exon-sc0000301-1510915933:349106..350921 | TCONS_00018561-exon-sc0000301-1510915933:349106..350921 | Clytia hemisphaerica | exon |
| TCONS_00018561-exon-sc0000301-1575043694:349106..350921 | TCONS_00018561-exon-sc0000301-1575043694:349106..350921 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000301 | supercontig | sc0000301:340324..350921 + |
Blast
BLAST of TCONS_00018561 vs. Swiss-Prot (Human)
Match: KCNA2 (Potassium voltage-gated channel subfamily A member 2 OS=Homo sapiens GN=KCNA2 PE=1 SV=2) HSP 1 Score: 399.823 bits (1026), Expect = 1.483e-131 Identity = 219/438 (50.00%), Postives = 293/438 (66.89%), Query Frame = 2
Query: 197 GYPQENHKNHNYIETNESLIKEEDLIRINVCGMIYETLRSTLQRFPDTLLGDKSRLDLYYVKSRDFYYFDKNRQAFEAILYYYQTGGILIRPPNIPMPLFAEEVAFFDLGESVFMQLQKEEGYISDQERVLPTNELQRKVWELFEFPDSSQAARILATWSVLVIILSITVFCLETLPQYSVNNNKPLTTAAPSGNVTNGTLSATPSKSEGEMYRQPWFSFELGCIIWFSFEYLVRLLSSPSKWQFAKSFLNTIDLLAILPYFITLSI----------NSENTTPXXXXXXXXXXXXFRIFKLSRHSLGLRILGHTLRASISELGMLIFFLCLGVILFSSAIFYAEQGMND-QFQSIPDAFWYSLVTMTTVGYGDKVPKTLPGKFVGSLCAIVGVLTIALPVPVIVSNFEFFYKRDRMTFERSKYNTPSENQSKRQSPD 1477
G+PQ+ + E E ++ IN+ G+ +ET TL +FP+TLLGD + Y+ R+ Y+FD+NR +F+AILYYYQ+GG L RP N+P+ +F+EE+ F++LGE +++EGYI ++ER LP NE QR+VW LFE+P+SS ARI+A SV+VI++SI FCLETLP + N + +N T+ S S + P+F E CIIWFSFE+LVR + PSK F + +N ID++AI+PYFITL + L++LRV+RLVRVFRIFKLSRHS GL+ILG TL+AS+ ELG+LIFFL +GVILFSSA+++AE + QF SIPDAFW+++V+MTTVGYGD VP T+ GK VGSLCAI GVLTIALPVPVIVSNF +FY R+ E+++Y + SPD
Sbjct: 17 GHPQDTYDPEADHECCERVV-------INISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSEEIRFYELGEEAMEMFREDEGYIKEEERPLPENEFQRQVWLLFEYPESSGPARIIAIVSVMVILISIVSFCLETLPIFRDENEDMHGSGVTFHTYSNSTIGYQQSTS----FTDPFFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYFITLGTELAEKPEDAQQGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEADERESQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETEGEEQAQYLQVTSCPKIPSSPD 443
The following BLAST results are available for this feature:
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