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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018560 ID=TCONS_00018560|Name=TCONS_00018560|organism=Clytia hemisphaerica|type=transcript|length=1971bp
GGTCAGGAAACAACTGGGCTTGAAACAAGCTTTCACAAAAGATACAAAAC
TTTCGAAGAAGATGACTCGAGTTTAGTCTTGGTTGAGGTACTGTGACATT
GTTTTGAAGTGAAAGAGAAATATTTAAATGACTTCTTGTTGCAGTAAAGC
TAACGGTCAACCACCTTGGTCACCGGTTGTCCCCTACAAAAATCAACTGA
CGTTGCCATCCAAAGAACGACTAAGTGCTAGTACGCAAGACTTACGAAAT
GGTAACATGTTAAAATACTATGATGGATATCCTCAAGAGAACCACAAGAA
TCATAATtacattgaaacaaatgaaTCACTTATTAAAGAAGAAGATTTGA
TTCGGATCAACGTCTGTGGAATGATTTATGAGACTTTGCGAAGCACCCTC
CAAAGATTCCCAGATACGTTACTTGGTGACAAAAGTCGATTGGATTTGTA
CTATGTTAAATCAAgagatttttattattttgataagAACAGACAAGCTT
TTGAAGCCATTCTGTATTATTACCAAACAGGTGGCATTTTGATTCGGCCG
CCCAACATTCCCATGCCGTTGTTCGCAGAGGAGGTGGCCTTCTTTGACCT
TGGTGAAAGTGTCTTTATGCAGTTACAAAAAGAGGAAGGTTACATATCTG
ACCAAGAACGCGTCTTACCGACGAACGAGCTTCAACGGAAAGTGTGGGAG
TTGTTCGAATTCCCTGATTCTAGTCAAGCAGCACGCATCCTTGCAACATG
GTCCGTTCTCGTTATCATCTTATCCATCACTGTTTTTTGTTTGGAAACTT
TGCCACAATACTCAGTGAACAACAACAAGCCTCTGACGACTGCTGCACCT
TCAGGGAATGTTACAAACGGTACGCTCTCTGCAACTCCGAGTAAAAGTGA
AGGTGAAATGTACCGTCAACCATGGTTTTCCTTTGAATTAGGCTGCATCA
TTTGGTTTTCCTTTGAATATCTGGTGCGCCTTCTCTCATCCCCATCCAAA
TGGCAATTTGCCAAATCCTTTCTTAACACCATCGATTTATTGGCCATCCT
TCCTTATTTCATCACCCTATCCATCAATTCGGAGAACACCACACCGCTAT
CCGTTCTTCGGGTGGTCCGGTTGGTTCGTGTCTTCCGTATCTTCAAATTG
TCCAGACATTCACTTGGCTTGCGTATCTTGGGACACACATTACGAGCGAG
TATCAGTGAATTGGGCATGTTGATATTCTTTCTGTGTCTTGGTGTCATTC
TGTTTTCCAGTGCCATATTCTATGCGGAACAAGGAATGAATGATCAATTC
CAAAGCATTCCCGATGCGTTTTGGTACAGTCTAGTCACCATGACAACCGT
TGGATACGGAGACAAAGTTCCCAAAACATTACCTGGGAAATTTGTTGGAA
GTCTTTGTGCGATCGTTGGCGTGTTGACAATTGCATTGCCAGTACCGGTT
ATTGTGTccaattttgagtttttttacaAGCGTGATCGGATGACGTTCGA
AAGGAGCAAGTATAACACACCGTCGGAGAATCAATCCAAACGACAATCAC
CTGATCAATCGCCTCAAAGCAATCATAAAGAGAACAACATCAATCATAAT
CACAACGAAGATCCTCTCTTGACAACTACTGTTATGTAAACTTGTTATCA
CGAGAGAGCTCCCGCTACATGGTGATTCATGAGTTTTTGTGGCTGCGTAA
ATAAGAGGAGGTAAACCATATGGTGATTGGGTTACCTAAATCCGTTCGGT
ATAGAAAGAACACTTTCACTGAAATAGAGatcattaaaattgatgattta
GACAGATGCTGATCGCCAAGTTTTAActtttaattgtttttcttaATGAA
AGTCAATGCTGTTAGGTCTTAGCGAATCTTCACTGCAAGTGGTGTCTTTC
GATTCCTTGTAATAACAGGAGAAAAGTCTTTAACAAGCAAGTGTTTGAAA
ACTTAATGTTGTCATCTTCNN Run BLAST on NCBI transcript from alignment at sc0000301:340057..350921+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018560 ID=TCONS_00018560|Name=TCONS_00018560|organism=Clytia hemisphaerica|type=transcript|length=10865bp|location=Sequence derived from alignment at sc0000301:340057..350921+ (Clytia hemisphaerica)
GGTCAGGAAACAACTGGGCTTGAAACAAGCTTTCACAAAAGATACAAAAC
TTTCGAAGAAGATGACTCGAGTTTAGTCTTGGTTGAGGTACTGTGACATT
GTTTTGAAGTGAAAGAGAAATATTTAAATGACTTCTTGTTGCAGTAAAGC
TAACGGTGAGTCTTTTGACAGCTTCTTCAGTATTTGATCTATCAATAAGT
TAATTTTAGTATCAGTAGATTGAAAGGGTCTTCAATCAGTCGGAATACTG
TTACAACCTTTTTGATCTGGAACTTCGTAAAACAGTTGAAACTACATAAA
AGCTCTGATTGGATAAAATCCAATAATATTCCTAGAAATCGAAGGTAAGC
TTAGTTTTTCACCATGTATTTCGAGGCTGAAATTATCCAAGCTATCCCCT
TTAAGATGAATATCTCTTCCCATTAGTTGATGTTGGTTTGATTCTCACTT
TGCTCTTAAGGTCGGCTTCATTCCTTACCACCTTAAAAACGTTGTGCTTC
AATATGCAATGTCTAAATGATTCTTTCTGTTGTTTTCTCGATGatcaatt
aaaaaaagaagccaTCAAGTTCTTGTTCCTATACTGTATGTATACGATTT
cgtatttgattttcaaatacaaaactCGGTTTCAATATTCTATTAGTTCT
TTTAGGCTTGTTTTATTAAACCAATTAGTTCTTTTGGCTATTTGGAACCT
GGAATCGTTAAAAGtgagaacaaaataaaaataattcgatTACGCTCACC
GAGTTTTGAATACAATTCTATTTTCTTCTGATTGGATTTCCAATCTGGTG
ATATATTTTAAACTTAAAAGAATCTCAAgggtttttgtttgtttgtttgt
ttgtttgcttgcttATCTTGAAGGTTTAGCTTTTGGGTGGTTTATACTTC
AGAAGAGCAAGTGAGTTAGAGTAATGTTTTGCAGTATGTTGTCACGTTCA
AGATGTCAACTGAATGCTTCTACACCAAATTTTTGTGAGGATATTTCTTA
TTTATACTTATTGTACAATTTTAAACTAAATATATGTAAAGTTCTCTCTA
AAGAAGGTCAGAgggataatatttttttactttttacttgaCTAAACACT
TTTACCCTAGTAAGTGGCGACACAAGGTTTCAGATTAgaaaaaatgccaa
taaaatgTCAGCACCCTCTCTTTTCATTCAAAAGTTTAAGCTAGCTAGGT
tagggagcggtcataaagtatctactagaggggggtggaggatattttga
aaaatccaaaaaaaatttcgcacaCCCCCCCCCCNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNtgaaaatattaaactgtaagagcagtatggttgaaagtaacgcccgg
aatctttgagtcaagaaacttggaatttgctttttgtaatttgaaatgtt
aagTAGCAGATGCtaaggaggcacaaccatggtttgcgccgacgggcgaa
aatttcaatatttttcagcaccattttagctaaaagacactttgttttga
caaatttcttttaagaagtactttttcaaaccactctgatgagctgcgag
agccactaatctacttccctcacttagctcaatgttacaaaccagatgat
gcccaaataatggCAATATGAAATGTACATATATCCAATAAGATAAATTA
TGAGTTGTCGGCCGTAAGGCCGAAAAATTTTTNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNggtagcgaaaacttaggggaa
actgttaggtttttgagacttgcctTAAGTCACTCGAGGTTTTGAGATGG
AGGGAGATATGTTCATCTTATTTGGTCATTGGTAGGAACTCTCTACTCAT
TTCTTCACTTAGTGTGAAATATATTGGACATAAATTCGCCCTCTTCGCAG
ATTATTCttcaaagtcttttcaaaaaatggcaGAATGAAGAGAAGAAAGA
TAGATAAACAAAAGCCCTATAGATCGTAGAATCCTAAATGTGGCAAAATC
TGTGTTTTTCCCCTTTTGCGTTTTTCTTTCGAAGTTTTTTCTATTTGAAT
GATGTTGGTCCTGTAGACGGTTTGGTAGGCTAGATCGTGAAGGCTTTTCT
CAGTTTTCTGTGGAGAGGAGAAAATGCATCACCATCGATCTCTCAACAAC
CTGATGATGCAACCTAAACCCGGTAATAACCTTCTTTTCAAACCAATTCT
CAAAATCGTCTTTCTTATAATTGGCTTTGCCTTACACTCTTCTTTTTGAA
TCTCCCAATCACGATTCAGCAATTCTTTTCTGATCTAATTCAGACTCCAT
ACCACAAATAAAAGAAgagcaatatattttttaacatATTAACCCCTGTC
TCCCTGGTCCGATGAGAATAATTTGCCACCAGTATGAAATCAATGAGCAA
ACACGTGCAAAAACCAATTGGGGATGTTTTCTCTTCACCATTAGggtgta
atttttaaaaagtgtagCTTTTCAATCATGAAATCTCGAGTTGCTTTTTC
ACCGCAACGATTATTTGGGCGACTTTATTTTTCCAGCGGGTACAGATGTC
GGTCAGTGCCTTTGATACAGGGGTGGATATGTaattaaaactgtttttat
tgATATAATTATATAAAGTTAATAATAGCGATGGCTTTTTTCAACGTCGT
GAGTCATGTTTTGATGTcgaaaagaagagagaaaaaaagcGACGAAGAGA
CGAATGGTAAGAGAAGTTCAACACTTGTCCGAGTTCAATATTTTACGGTA
TTGCCCGAAGAAACAGTttatgactttttaaagtagattcttttgtgttt
aatAACACTCAATAATAACACCCATAAATATATCTATTTCGTTTATTCTA
ACACCATTGGTATTCCATGAGCCCGGAACTTTTTATTGGACTGACCTTCG
ATGACCTTCTCTAAAATATAAGTTTAATATTCGTTTAATTTTTTACAGTT
TACACGGGTAGCCAACTCGGTTATAATGCGGACCAAATGGGAACATTGCA
AGGTTggtgtttcagaaaaaaactcttAATGACAAGGTTGCCAAGGTTAC
CCCTCGAATAATCATCAGTTCCGAagtttttaaaagttcaacTCGTTCaa
caaagtaaattttttgagtGATCGCAAAGATGAATAATTATGTAATGCAA
TAAAACCTATAAAAGGcagacactcaattagcggaccctctgattggTGG
ACCCTCGGACAAATTCTTTTGCACGAAATTGCAAAAACCCCTATTTTCGC
TCTCCAATTAGCGAGAATCGAATATCAAACTGGTCAcagattttttcttt
gaagCACGTATTAGTTTTATTATCCAAAttagttttaaaagttttaagtt
tTCTCTTGACCCATTCGACGAATTTAGCCGGGCCAACGAAATCATAAACG
CTTGCACTTCAACCCCCAGCCATCAGCTAGATTCAACCTTTTCCCAGTAG
CTCGAGCTCTGGTTCCGGTATTCTGTTCGAATGATTgctacaatattttt
ttttcaactatGTTATCTGGTTCATGTTTGCAAACTAGTGATTTCCCCTA
TGAACGGAGTCCAAATCTGACGATCCCTTTCTACCTTTCTTGTAAGTACG
GTACCCTCTGACTTTCAAGTTAATCTTGTTCAACTTCTATTTTTGTGTTA
TATTATATTTCTATAGACATTCTTTAAATCGTGAAAATTAAATTGTTGCG
TCTCAAtaacctttctcttgttcttctatgTCCTAGTGTCCTGCACAAGT
TCTAAAGACTCCCttacaccctgggatggcctaatttcaaaattggagct
cttagatgaaaaagttctaaaatttgGACGCTTCTAGTTAGCGGACGTTT
CTCCGGTGGTatccgctaattagaggctcCATCGGTGTCAAGTCAATGTA
GAAGAGGGGTTAGAAAACGATTTTTCTAATCTTCTggagaaaaaaagaca
aatgaatCAATTTTACTTGAACAGGAAAAAAGAGATGTgagagaaaaaag
ttttttatttgagggTTGATCGTGGTTGTGGTCATCTTTCGACCGCATGT
TTTACGGTTTTTTGTGTTCGAAGGGTTTTAAAAACGTTGACAGAAAATGA
GATAAAAAGAGCGaagtagaaaaaagaaaaaagaatggaGAAAAGGAATC
ATCAAGCAGAATGGAAATTGGAAAATATGTGGAAAGTTTTTCTGTTaaga
aaatagataaaaattgTTGTTGATGTTagtttataaaacaaaaaaaatca
tgaagATTTTCCTTTCGAACTAATTAGAATGTCATTCTTTAGAAACGCCT
TTCGAGAAGTATCTTTGATTTTCACAGCTCAAAGTTTTCTTTTGACTTTT
AGGAAGTCACAGTCTTTTTGTCTTCTGTTTTTGCAGTTAACTTCTTTTTT
GGTGATATTTCTACTGTATGATCTCTAATATCTTGGGGAGCAACATGCTG
CTATTTAAAATGATTACTATCCCTTCCTAAACAAAATAGTTATTGATTGG
AAACACATCAAATCGAAATCCAATTTCAGTATATAGATTCCTAGCTGGTA
AACATTTCAAACGTTGTATATGGGCgtattttgttgttattttaTGGGCG
TATGGGGGTGGGGTAaggggatgtgccgctggtccAGGTAACTTAGGAAG
Tgttcataaagtatctactagaagggggtggaggatttttccaaaaatcg
gaaaaaaaattcgcACCCCTATGTTCAAAGATTTTTCGAACCTCCCCCTT
AACCAAGCCAAAAacttttcccccccccccccttaaccaagccaaaaact
tttcccccccccccccttaaccaagccaaaaacttttccccccccccccc
ttaaccAAGCCAATAACTTTTCTCACCCCCTCCCCTccctaagaaaattt
tttaataaataccCCCCTCTCGTGCAATCCTTGCCTTGTTCATAAGTTAG
ATGAAAGTTGCTGAAATGTGAAATTGGATTTCAAACATCGCTTCCGGAAC
TTTACAATCTCATTTATATCCTTTAATTTTTGTCTGttctttttgggaaa
ttttatCGTAGCGAGTGTTATAACTGAGGCGCAACCGTTTTGCGccgaca
aagaaaattttaaaattttaacccTCTCATTTAGCTAGGTGACCCTAGGT
GCTTCCTGTTAGTGCGAGAGTTATTGAAAACAAGACTAAGATTTCAAGCT
ATATTActtaaaaattgagatttttgcaGCATGCAAAGACCATATATGCA
AAGACAAATAATAGATTATGATTGGtgtaaagttttaaagaaaagttttc
aaaaaaggcTCTGATAAATGGTTGAAAAACACTTGATTTTTGAATCAACC
TGGTGGGATGTCAAAacaatttccccccccccccctaaagaTAAGATGgc
aaaaaattatctttcacCGTACCTTTTTTTTCTGGCACTTTACTAATGAT
TTTTTTAGCACGGGTGAAAAGAAATCAGCAACGTGTATTTGACAGACCTC
CCTGTTGAACTGGTTGTGTTTAATCATTCTTTTCTGTGATTTTCCCTTTC
AACCTGGAAAAGGGTGATGATATGGCTCTAAACGAACCTTTTCAATATTT
GGCCACTTTCAGGAAATTCTAATTCAAAAGCTGATATCGatagcaaaaat
aagaaaaaagcgaaaatgaaaagttgaaagaaaaataaaatcgaaCTGGA
AGAGAAATATAGAATTTcatctttttgtactttttttttGTACTTTCTTT
TCTTCTGAAGGGAATATATTTCCCTATATATATCGTACTTTTCTCTAGCA
Atgggatttgaaaataatataacttttttgggacttttcttttttctttt
tccaatttCAGCCGTTTTTTCTTTCGATTTACACCTTCCATCGAAttact
tttttcttgaaaaccGTTTGTTTGGGGAAGAAATTGGTTAATGAAAAAAG
CCCCCACTCGACAAAGAAACGTGAGGAAAAAACACTTTAATAGGATTGAT
ATAGCGAAAAGaagttttaaataaataaacataaatTTGATAACAAGAAA
GCCTGTTTCTAATAAGCAGATGGCAGcattaaaaacaaacattttatcCA
ACTTTGGATACTGTTTCTACAATCGCCTTTCCTTACATCTTTATGTGCCT
GCTATATCTTATGTAAAGACGTGAGGAAAGTTTGAGAGAGAAAATGAACG
AGAGCTTGTTGAAAGGTGAATGAAGGGTAATCCCTCTTTTGGCCTTCTTT
CTTATTTACTCCTTCTCCTAGTTGAAACTTGACTCGAATTGTTATCAAAT
CAAACATGGAAGGATCATTTCATAGTTTCACTTCATTAAATCatcttttt
tcattcttttatttcgtttttcttcctttttaaaaatattgttcctcgaa
caaaaacttttcatttacGATTTGATGAAGGACAAAATAAGTTTATTCAC
CCTCTACCCGAACaagaacaaatttctagttGACTGTGTTTTCAACCTGA
TGTTCTTTTCACTTAACACCCTATGCTAGATATTTCCCCATTATGCAAAC
TATCCCTATTTATTCATTCTAAGTACTAATGAACTTTGTCTTTTTTCGAG
CcttgatgttttttttcctCTTCAATTTTGAGATGATTTTTTGCGTTCAA
ATTAGAAGGAAGatatttgagcaaattttattattttaacacGGGAAATT
AGAATAGAATGGTTGCTGACTTTTAAGGTGAAGATTAGATGACCTTTTAC
AAGTTTGATCAGGTTTATCAAATATTTAGGTGCTTTGTAAGGGTCAAAGG
TTGGCAAATCTGTCGATTATGTTTGGATTCAAAAGAATTCGTGTGTCCTT
CTTTAAAATCTATGTTGAGAGAAAAGACTTCACGACCTTGAGCTCAAACC
ATATTGGCCTGTTCTTAGACGATTTTAAGCATTCAGTTTGAGTAGTTGAC
ACATCGTACATTATTTCGGTTCCTTTCTACCTTTCTTGCGTTTGTTTGAT
CTACATTCGAAATAACATTCtaagttttgtatttttcttcatCGTTCAGG
TCAACCACCTTGGTCACCGGTTGTCCCCTACAAAAATCAACTGACGTTGC
CATCCAAAGAACGACTAAGTGCTAGTACGCAAGACTTACGAAATGGTAAC
ATGTTAAAATACTATGATGGATATCCTCAAGAGAACCACAAGAATCATAA
TtacattgaaacaaatgaaTCACTTATTAAAGAAGAAGATTTGATTCGGA
TCAACGTCTGTGGAATGATTTATGAGACTTTGCGAAGCACCCTCCAAAGA
TTCCCAGATACGTTACTTGGTGACAAAAGTCGATTGGATTTGTACTATGT
TAAATCAAgagatttttattattttgataagAACAGACAAGCTTTTGAAG
CCATTCTGTATTATTACCAAACAGGTGGCATTTTGATTCGGCCGCCCAAC
ATTCCCATGCCGTTGTTCGCAGAGGAGGTGGCCTTCTTTGACCTTGGTGA
AAGTGTCTTTATGCAGTTACAAAAAGAGGAAGGTTACATATCTGACCAAG
AACGCGTCTTACCGACGAACGAGCTTCAACGGAAAGTGTGGGAGTTGTTC
GAATTCCCTGATTCTAGTCAAGCAGCACGCATCCTTGCAACATGGTCCGT
TCTCGTTATCATCTTATCCATCACTGTTTTTTGTTTGGAAACTTTGCCAC
AATACTCAGTGAACAACAACAAGCCTCTGACGACTGCTGCACCTTCAGGG
AATGTTACAAACGGTACGCTCTCTGCAACTCCGAGTAAAAGTGAAGGTGA
AATGTACCGTCAACCATGGTTTTCCTTTGAATTAGGCTGCATCATTTGGT
TTTCCTTTGAATATCTGGTGCGCCTTCTCTCATCCCCATCCAAATGGCAA
TTTGCCAAATCCTTTCTTAACACCATCGATTTATTGGCCATCCTTCCTTA
TTTCATCACCCTATCCATCAATTCGGAGAACACCACACCGCTATCCGTTC
TTCGGGTGGTCCGGTTGGTTCGTGTCTTCCGTATCTTCAAATTGTCCAGA
CATTCACTTGGCTTGCGTATCTTGGGACACACATTACGAGCGAGTATCAG
TGAATTGGGCATGTTGATATTCTTTCTGTGTCTTGGTGTCATTCTGTTTT
CCAGTGCCATATTCTATGCGGAACAAGGAATGAATGATCAATTCCAAAGC
ATTCCCGATGCGTTTTGGTACAGTCTAGTCACCATGACAACCGTTGGATA
CGGAGACAAAGTTCCCAAAACATTACCTGGGAAATTTGTTGGAAGTCTTT
GTGCGATCGTTGGCGTGTTGACAATTGCATTGCCAGTACCGGTTATTGTG
TccaattttgagtttttttacaAGCGTGATCGGATGACGTTCGAAAGGAG
CAAGTATAACACACCGTCGGAGAATCAATCCAAACGACAATCACCTGATC
AATCGCCTCAAAGCAATCATAAAGAGAACAACATCAATCATAATCACAAC
GAAGATCCTCTCTTGACAACTACTGTTATGTAAACTTGTTATCACGAGAG
AGCTCCCGCTACATGGTGATTCATGAGTTTTTGTGGCTGCGTAAATAAGA
GGAGGTAAACCATATGGTGATTGGGTTACCTAAATCCGTTCGGTATAGAA
AGAACACTTTCACTGAAATAGAGatcattaaaattgatgatttaGACAGA
TGCTGATCGCCAAGTTTTAActtttaattgtttttcttaATGAAAGTCAA
TGCTGTTAGGTCTTAGCGAATCTTCACTGCAAGTGGTGTCTTTCGATTCC
TTGTAATAACAGGAGAAAAGTCTTTAACAAGCAAGTGTTTGAAAACTTAA
TGTTGTCATCTTCNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018560-exon-sc0000301-1491911889:340057..340211 | TCONS_00018560-exon-sc0000301-1491911889:340057..340211 | Clytia hemisphaerica | exon |
| TCONS_00018560-exon-sc0000301-1510915933:340057..340211 | TCONS_00018560-exon-sc0000301-1510915933:340057..340211 | Clytia hemisphaerica | exon |
| TCONS_00018560-exon-sc0000301-1575043694:340057..340211 | TCONS_00018560-exon-sc0000301-1575043694:340057..340211 | Clytia hemisphaerica | exon |
| TCONS_00018560-exon-sc0000301-1491911889:349106..350921 | TCONS_00018560-exon-sc0000301-1491911889:349106..350921 | Clytia hemisphaerica | exon |
| TCONS_00018560-exon-sc0000301-1510915933:349106..350921 | TCONS_00018560-exon-sc0000301-1510915933:349106..350921 | Clytia hemisphaerica | exon |
| TCONS_00018560-exon-sc0000301-1575043694:349106..350921 | TCONS_00018560-exon-sc0000301-1575043694:349106..350921 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000301 | supercontig | sc0000301:340057..350921 + |
Blast
BLAST of TCONS_00018560 vs. Swiss-Prot (Human)
Match: KCNA2 (Potassium voltage-gated channel subfamily A member 2 OS=Homo sapiens GN=KCNA2 PE=1 SV=2) HSP 1 Score: 399.823 bits (1026), Expect = 3.226e-131 Identity = 219/438 (50.00%), Postives = 293/438 (66.89%), Query Frame = 2
Query: 275 GYPQENHKNHNYIETNESLIKEEDLIRINVCGMIYETLRSTLQRFPDTLLGDKSRLDLYYVKSRDFYYFDKNRQAFEAILYYYQTGGILIRPPNIPMPLFAEEVAFFDLGESVFMQLQKEEGYISDQERVLPTNELQRKVWELFEFPDSSQAARILATWSVLVIILSITVFCLETLPQYSVNNNKPLTTAAPSGNVTNGTLSATPSKSEGEMYRQPWFSFELGCIIWFSFEYLVRLLSSPSKWQFAKSFLNTIDLLAILPYFITLSI----------NSENTTPXXXXXXXXXXXXFRIFKLSRHSLGLRILGHTLRASISELGMLIFFLCLGVILFSSAIFYAEQGMND-QFQSIPDAFWYSLVTMTTVGYGDKVPKTLPGKFVGSLCAIVGVLTIALPVPVIVSNFEFFYKRDRMTFERSKYNTPSENQSKRQSPD 1555
G+PQ+ + E E ++ IN+ G+ +ET TL +FP+TLLGD + Y+ R+ Y+FD+NR +F+AILYYYQ+GG L RP N+P+ +F+EE+ F++LGE +++EGYI ++ER LP NE QR+VW LFE+P+SS ARI+A SV+VI++SI FCLETLP + N + +N T+ S S + P+F E CIIWFSFE+LVR + PSK F + +N ID++AI+PYFITL + L++LRV+RLVRVFRIFKLSRHS GL+ILG TL+AS+ ELG+LIFFL +GVILFSSA+++AE + QF SIPDAFW+++V+MTTVGYGD VP T+ GK VGSLCAI GVLTIALPVPVIVSNF +FY R+ E+++Y + SPD
Sbjct: 17 GHPQDTYDPEADHECCERVV-------INISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSEEIRFYELGEEAMEMFREDEGYIKEEERPLPENEFQRQVWLLFEYPESSGPARIIAIVSVMVILISIVSFCLETLPIFRDENEDMHGSGVTFHTYSNSTIGYQQSTS----FTDPFFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYFITLGTELAEKPEDAQQGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEADERESQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETEGEEQAQYLQVTSCPKIPSSPD 443
The following BLAST results are available for this feature:
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