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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018559 ID=TCONS_00018559|Name=TCONS_00018559|organism=Clytia hemisphaerica|type=transcript|length=1862bp
GTGCTGGcttaagttttttattctttttgaagGGGTTTTGAAAAAGGTCA
ACCACCTTGGTCACCGGTTGTCCCCTACAAAAATCAACTGACGTTGCCAT
CCAAAGAACGACTAAGTGCTAGTACGCAAGACTTACGAAATGGTAACATG
TTAAAATACTATGATGGATATCCTCAAGAGAACCACAAGAATCATAATta
cattgaaacaaatgaaTCACTTATTAAAGAAGAAGATTTGATTCGGATCA
ACGTCTGTGGAATGATTTATGAGACTTTGCGAAGCACCCTCCAAAGATTC
CCAGATACGTTACTTGGTGACAAAAGTCGATTGGATTTGTACTATGTTAA
ATCAAgagatttttattattttgataagAACAGACAAGCTTTTGAAGCCA
TTCTGTATTATTACCAAACAGGTGGCATTTTGATTCGGCCGCCCAACATT
CCCATGCCGTTGTTCGCAGAGGAGGTGGCCTTCTTTGACCTTGGTGAAAG
TGTCTTTATGCAGTTACAAAAAGAGGAAGGTTACATATCTGACCAAGAAC
GCGTCTTACCGACGAACGAGCTTCAACGGAAAGTGTGGGAGTTGTTCGAA
TTCCCTGATTCTAGTCAAGCAGCACGCATCCTTGCAACATGGTCCGTTCT
CGTTATCATCTTATCCATCACTGTTTTTTGTTTGGAAACTTTGCCACAAT
ACTCAGTGAACAACAACAAGCCTCTGACGACTGCTGCACCTTCAGGGAAT
GTTACAAACGGTACGCTCTCTGCAACTCCGAGTAAAAGTGAAGGTGAAAT
GTACCGTCAACCATGGTTTTCCTTTGAATTAGGCTGCATCATTTGGTTTT
CCTTTGAATATCTGGTGCGCCTTCTCTCATCCCCATCCAAATGGCAATTT
GCCAAATCCTTTCTTAACACCATCGATTTATTGGCCATCCTTCCTTATTT
CATCACCCTATCCATCAATTCGGAGAACACCACACCGCTATCCGTTCTTC
GGGTGGTCCGGTTGGTTCGTGTCTTCCGTATCTTCAAATTGTCCAGACAT
TCACTTGGCTTGCGTATCTTGGGACACACATTACGAGCGAGTATCAGTGA
ATTGGGCATGTTGATATTCTTTCTGTGTCTTGGTGTCATTCTGTTTTCCA
GTGCCATATTCTATGCGGAACAAGGAATGAATGATCAATTCCAAAGCATT
CCCGATGCGTTTTGGTACAGTCTAGTCACCATGACAACCGTTGGATACGG
AGACAAAGTTCCCAAAACATTACCTGGGAAATTTGTTGGAAGTCTTTGTG
CGATCGTTGGCGTGTTGACAATTGCATTGCCAGTACCGGTTATTGTGTcc
aattttgagtttttttacaAGCGTGATCGGATGACGTTCGAAAGGAGCAA
GTATAACACACCGTCGGAGAATCAATCCAAACGACAATCACCTGATCAAT
CGCCTCAAAGCAATCATAAAGAGAACAACATCAATCATAATCACAACGAA
GATCCTCTCTTGACAACTACTGTTATGTAAACTTGTTATCACGAGAGAGC
TCCCGCTACATGGTGATTCATGAGTTTTTGTGGCTGCGTAAATAAGAGGA
GGTAAACCATATGGTGATTGGGTTACCTAAATCCGTTCGGTATAGAAAGA
ACACTTTCACTGAAATAGAGatcattaaaattgatgatttaGACAGATGC
TGATCGCCAAGTTTTAActtttaattgtttttcttaATGAAAGTCAATGC
TGTTAGGTCTTAGCGAATCTTCACTGCAAGTGGTGTCTTTCGATTCCTTG
TAATAACAGGAGAAAAGTCTTTAACAAGCAAGTGTTTGAAAACTTAATGT
TGTCATCTTCNN Run BLAST on NCBI transcript from alignment at sc0000301:336161..350921+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018559 ID=TCONS_00018559|Name=TCONS_00018559|organism=Clytia hemisphaerica|type=transcript|length=14761bp|location=Sequence derived from alignment at sc0000301:336161..350921+ (Clytia hemisphaerica)
GTGCTGGcttaagttttttattctttttgaagGGGTTTTGAAAAAGGTGA
AGCAAACTTTTGTCATATTTCAAACAACTAACTTCTTTTTGGTCGGCCTC
ATTTGGATGTTTTTTCAAGGAATACACATGATCGTATGTAGTTCAGACAG
ACctttttattgttattatttttcaatcgcACCACAGACACCAAAAAATT
ATACTTGATTGACTTGATGGCCAGGAAACTTTAATAAATTTTCTTCGCTT
AGAAGCTTATAAATTAAAGAAGATGTTTCTACCTCTTCACTTTCCACTTT
AAAATGACCGGAAATCCGGATAAGTTAGGGAAGTTTCTGTGCTTGCAGTA
TTTAAACGGTAACTTTTTTGTCCAATTATAATTTCAAAACTATCTTCATT
TTTTACGGTTCTTCGTTTTATTTAATAACAGCTAAACCATAAAGGTTGGA
ATGGCTCACgctgatttgaattttttattaggGAAATATTACAGTTGTTC
GCTTATAGGGAccgcaatgattttttcaaattgtttttagcgCATTGAAA
CCATGCTCATTGGAAAGAGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNAATGCTTCTAAAACTTATCCCATGGTTATAGGTG
gtctaaaacctaaaaacaacattttggtcgattccaaccattttaccccc
gtctttcgcGGTCCCTATCGCTTAATGTTATGATAAAGATTTTTGTCAAC
tacatttcaaaacattttggtGATTGCTAAAAGTGTCCTGAGGCATTCTA
CAATAATGTTTTTAAACACTCCTGTGTGTCTTGTATGTAAACAGTTTTTC
TTTATCCAAAATGAAACATCAATAATCTGTTACCCTGTCAACTTCGGTTG
GGATTGTTTCCTTTACCGAAAAGACGAATGGACTAACCAAGTTTTCGCTT
TGCgtggttttttattttgtcgaGGACATCGGttctttattttctatttc
agttTTTCGTTTAAACGGTTTTTTCTCCGTAAAATAAGTTTACATTTCTG
TTCacaatgttttttgttttgaaattggaaaataaagaggaatatatttt
caattttgttaatgTTAAAAATGAAGATGGAATCTACTAGCCATAAGGTC
AGGAAACAACTGGGCTTGAAACAAGCTTTCACAAAAGATACAAAACTTTC
GAAGAAGATGACTCGAGTTTAGTCTTGGTTGAGGTACTGTGACATTGTTT
TGAAGTGAAAGAGAAATATTTAAATGACTTCTTGTTGCAGTAAAGCTAAC
GGTGAGTCTTTTGACAGCTTCTTCAGTATTTGATCTATCAATAAGTTAAT
TTTAGTATCAGTAGATTGAAAGGGTCTTCAATCAGTCGGAATACTGTTAC
AACCTTTTTGATCTGGAACTTCGTAAAACAGTTGAAACTACATAAAAGCT
CTGATTGGATAAAATCCAATAATATTCCTAGAAATCGAAGGTAAGCTTAG
TTTTTCACCATGTATTTCGAGGCTGAAATTATCCAAGCTATCCCCTTTAA
GATGAATATCTCTTCCCATTAGTTGATGTTGGTTTGATTCTCACTTTGCT
CTTAAGGTCGGCTTCATTCCTTACCACCTTAAAAACGTTGTGCTTCAATA
TGCAATGTCTAAATGATTCTTTCTGTTGTTTTCTCGATGatcaattaaaa
aaagaagccaTCAAGTTCTTGTTCCTATACTGTATGTATACGATTTcgta
tttgattttcaaatacaaaactCGGTTTCAATATTCTATTAGTTCTTTTA
GGCTTGTTTTATTAAACCAATTAGTTCTTTTGGCTATTTGGAACCTGGAA
TCGTTAAAAGtgagaacaaaataaaaataattcgatTACGCTCACCGAGT
TTTGAATACAATTCTATTTTCTTCTGATTGGATTTCCAATCTGGTGATAT
ATTTTAAACTTAAAAGAATCTCAAgggtttttgtttgtttgtttgtttgt
ttgcttgcttATCTTGAAGGTTTAGCTTTTGGGTGGTTTATACTTCAGAA
GAGCAAGTGAGTTAGAGTAATGTTTTGCAGTATGTTGTCACGTTCAAGAT
GTCAACTGAATGCTTCTACACCAAATTTTTGTGAGGATATTTCTTATTTA
TACTTATTGTACAATTTTAAACTAAATATATGTAAAGTTCTCTCTAAAGA
AGGTCAGAgggataatatttttttactttttacttgaCTAAACACTTTTA
CCCTAGTAAGTGGCGACACAAGGTTTCAGATTAgaaaaaatgccaataaa
atgTCAGCACCCTCTCTTTTCATTCAAAAGTTTAAGCTAGCTAGGTtagg
gagcggtcataaagtatctactagaggggggtggaggatattttgaaaaa
tccaaaaaaaatttcgcacaCCCCCCCCCCNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNt
gaaaatattaaactgtaagagcagtatggttgaaagtaacgcccggaatc
tttgagtcaagaaacttggaatttgctttttgtaatttgaaatgttaagT
AGCAGATGCtaaggaggcacaaccatggtttgcgccgacgggcgaaaatt
tcaatatttttcagcaccattttagctaaaagacactttgttttgacaaa
tttcttttaagaagtactttttcaaaccactctgatgagctgcgagagcc
actaatctacttccctcacttagctcaatgttacaaaccagatgatgccc
aaataatggCAATATGAAATGTACATATATCCAATAAGATAAATTATGAG
TTGTCGGCCGTAAGGCCGAAAAATTTTTNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNggtagcgaaaacttaggggaaactg
ttaggtttttgagacttgcctTAAGTCACTCGAGGTTTTGAGATGGAGGG
AGATATGTTCATCTTATTTGGTCATTGGTAGGAACTCTCTACTCATTTCT
TCACTTAGTGTGAAATATATTGGACATAAATTCGCCCTCTTCGCAGATTA
TTCttcaaagtcttttcaaaaaatggcaGAATGAAGAGAAGAAAGATAGA
TAAACAAAAGCCCTATAGATCGTAGAATCCTAAATGTGGCAAAATCTGTG
TTTTTCCCCTTTTGCGTTTTTCTTTCGAAGTTTTTTCTATTTGAATGATG
TTGGTCCTGTAGACGGTTTGGTAGGCTAGATCGTGAAGGCTTTTCTCAGT
TTTCTGTGGAGAGGAGAAAATGCATCACCATCGATCTCTCAACAACCTGA
TGATGCAACCTAAACCCGGTAATAACCTTCTTTTCAAACCAATTCTCAAA
ATCGTCTTTCTTATAATTGGCTTTGCCTTACACTCTTCTTTTTGAATCTC
CCAATCACGATTCAGCAATTCTTTTCTGATCTAATTCAGACTCCATACCA
CAAATAAAAGAAgagcaatatattttttaacatATTAACCCCTGTCTCCC
TGGTCCGATGAGAATAATTTGCCACCAGTATGAAATCAATGAGCAAACAC
GTGCAAAAACCAATTGGGGATGTTTTCTCTTCACCATTAGggtgtaattt
ttaaaaagtgtagCTTTTCAATCATGAAATCTCGAGTTGCTTTTTCACCG
CAACGATTATTTGGGCGACTTTATTTTTCCAGCGGGTACAGATGTCGGTC
AGTGCCTTTGATACAGGGGTGGATATGTaattaaaactgtttttattgAT
ATAATTATATAAAGTTAATAATAGCGATGGCTTTTTTCAACGTCGTGAGT
CATGTTTTGATGTcgaaaagaagagagaaaaaaagcGACGAAGAGACGAA
TGGTAAGAGAAGTTCAACACTTGTCCGAGTTCAATATTTTACGGTATTGC
CCGAAGAAACAGTttatgactttttaaagtagattcttttgtgtttaatA
ACACTCAATAATAACACCCATAAATATATCTATTTCGTTTATTCTAACAC
CATTGGTATTCCATGAGCCCGGAACTTTTTATTGGACTGACCTTCGATGA
CCTTCTCTAAAATATAAGTTTAATATTCGTTTAATTTTTTACAGTTTACA
CGGGTAGCCAACTCGGTTATAATGCGGACCAAATGGGAACATTGCAAGGT
TggtgtttcagaaaaaaactcttAATGACAAGGTTGCCAAGGTTACCCCT
CGAATAATCATCAGTTCCGAagtttttaaaagttcaacTCGTTCaacaaa
gtaaattttttgagtGATCGCAAAGATGAATAATTATGTAATGCAATAAA
ACCTATAAAAGGcagacactcaattagcggaccctctgattggTGGACCC
TCGGACAAATTCTTTTGCACGAAATTGCAAAAACCCCTATTTTCGCTCTC
CAATTAGCGAGAATCGAATATCAAACTGGTCAcagattttttctttgaag
CACGTATTAGTTTTATTATCCAAAttagttttaaaagttttaagtttTCT
CTTGACCCATTCGACGAATTTAGCCGGGCCAACGAAATCATAAACGCTTG
CACTTCAACCCCCAGCCATCAGCTAGATTCAACCTTTTCCCAGTAGCTCG
AGCTCTGGTTCCGGTATTCTGTTCGAATGATTgctacaatattttttttt
caactatGTTATCTGGTTCATGTTTGCAAACTAGTGATTTCCCCTATGAA
CGGAGTCCAAATCTGACGATCCCTTTCTACCTTTCTTGTAAGTACGGTAC
CCTCTGACTTTCAAGTTAATCTTGTTCAACTTCTATTTTTGTGTTATATT
ATATTTCTATAGACATTCTTTAAATCGTGAAAATTAAATTGTTGCGTCTC
AAtaacctttctcttgttcttctatgTCCTAGTGTCCTGCACAAGTTCTA
AAGACTCCCttacaccctgggatggcctaatttcaaaattggagctctta
gatgaaaaagttctaaaatttgGACGCTTCTAGTTAGCGGACGTTTCTCC
GGTGGTatccgctaattagaggctcCATCGGTGTCAAGTCAATGTAGAAG
AGGGGTTAGAAAACGATTTTTCTAATCTTCTggagaaaaaaagacaaatg
aatCAATTTTACTTGAACAGGAAAAAAGAGATGTgagagaaaaaagtttt
ttatttgagggTTGATCGTGGTTGTGGTCATCTTTCGACCGCATGTTTTA
CGGTTTTTTGTGTTCGAAGGGTTTTAAAAACGTTGACAGAAAATGAGATA
AAAAGAGCGaagtagaaaaaagaaaaaagaatggaGAAAAGGAATCATCA
AGCAGAATGGAAATTGGAAAATATGTGGAAAGTTTTTCTGTTaagaaaat
agataaaaattgTTGTTGATGTTagtttataaaacaaaaaaaatcatgaa
gATTTTCCTTTCGAACTAATTAGAATGTCATTCTTTAGAAACGCCTTTCG
AGAAGTATCTTTGATTTTCACAGCTCAAAGTTTTCTTTTGACTTTTAGGA
AGTCACAGTCTTTTTGTCTTCTGTTTTTGCAGTTAACTTCTTTTTTGGTG
ATATTTCTACTGTATGATCTCTAATATCTTGGGGAGCAACATGCTGCTAT
TTAAAATGATTACTATCCCTTCCTAAACAAAATAGTTATTGATTGGAAAC
ACATCAAATCGAAATCCAATTTCAGTATATAGATTCCTAGCTGGTAAACA
TTTCAAACGTTGTATATGGGCgtattttgttgttattttaTGGGCGTATG
GGGGTGGGGTAaggggatgtgccgctggtccAGGTAACTTAGGAAGTgtt
cataaagtatctactagaagggggtggaggatttttccaaaaatcggaaa
aaaaattcgcACCCCTATGTTCAAAGATTTTTCGAACCTCCCCCTTAACC
AAGCCAAAAacttttcccccccccccccttaaccaagccaaaaacttttc
ccccccccccccttaaccaagccaaaaacttttcccccccccccccttaa
ccAAGCCAATAACTTTTCTCACCCCCTCCCCTccctaagaaaatttttta
ataaataccCCCCTCTCGTGCAATCCTTGCCTTGTTCATAAGTTAGATGA
AAGTTGCTGAAATGTGAAATTGGATTTCAAACATCGCTTCCGGAACTTTA
CAATCTCATTTATATCCTTTAATTTTTGTCTGttctttttgggaaatttt
atCGTAGCGAGTGTTATAACTGAGGCGCAACCGTTTTGCGccgacaaaga
aaattttaaaattttaacccTCTCATTTAGCTAGGTGACCCTAGGTGCTT
CCTGTTAGTGCGAGAGTTATTGAAAACAAGACTAAGATTTCAAGCTATAT
TActtaaaaattgagatttttgcaGCATGCAAAGACCATATATGCAAAGA
CAAATAATAGATTATGATTGGtgtaaagttttaaagaaaagttttcaaaa
aaggcTCTGATAAATGGTTGAAAAACACTTGATTTTTGAATCAACCTGGT
GGGATGTCAAAacaatttccccccccccccctaaagaTAAGATGgcaaaa
aattatctttcacCGTACCTTTTTTTTCTGGCACTTTACTAATGATTTTT
TTAGCACGGGTGAAAAGAAATCAGCAACGTGTATTTGACAGACCTCCCTG
TTGAACTGGTTGTGTTTAATCATTCTTTTCTGTGATTTTCCCTTTCAACC
TGGAAAAGGGTGATGATATGGCTCTAAACGAACCTTTTCAATATTTGGCC
ACTTTCAGGAAATTCTAATTCAAAAGCTGATATCGatagcaaaaataaga
aaaaagcgaaaatgaaaagttgaaagaaaaataaaatcgaaCTGGAAGAG
AAATATAGAATTTcatctttttgtactttttttttGTACTTTCTTTTCTT
CTGAAGGGAATATATTTCCCTATATATATCGTACTTTTCTCTAGCAAtgg
gatttgaaaataatataacttttttgggacttttcttttttctttttcca
atttCAGCCGTTTTTTCTTTCGATTTACACCTTCCATCGAAttacttttt
tcttgaaaaccGTTTGTTTGGGGAAGAAATTGGTTAATGAAAAAAGCCCC
CACTCGACAAAGAAACGTGAGGAAAAAACACTTTAATAGGATTGATATAG
CGAAAAGaagttttaaataaataaacataaatTTGATAACAAGAAAGCCT
GTTTCTAATAAGCAGATGGCAGcattaaaaacaaacattttatcCAACTT
TGGATACTGTTTCTACAATCGCCTTTCCTTACATCTTTATGTGCCTGCTA
TATCTTATGTAAAGACGTGAGGAAAGTTTGAGAGAGAAAATGAACGAGAG
CTTGTTGAAAGGTGAATGAAGGGTAATCCCTCTTTTGGCCTTCTTTCTTA
TTTACTCCTTCTCCTAGTTGAAACTTGACTCGAATTGTTATCAAATCAAA
CATGGAAGGATCATTTCATAGTTTCACTTCATTAAATCatcttttttcat
tcttttatttcgtttttcttcctttttaaaaatattgttcctcgaacaaa
aacttttcatttacGATTTGATGAAGGACAAAATAAGTTTATTCACCCTC
TACCCGAACaagaacaaatttctagttGACTGTGTTTTCAACCTGATGTT
CTTTTCACTTAACACCCTATGCTAGATATTTCCCCATTATGCAAACTATC
CCTATTTATTCATTCTAAGTACTAATGAACTTTGTCTTTTTTCGAGCctt
gatgttttttttcctCTTCAATTTTGAGATGATTTTTTGCGTTCAAATTA
GAAGGAAGatatttgagcaaattttattattttaacacGGGAAATTAGAA
TAGAATGGTTGCTGACTTTTAAGGTGAAGATTAGATGACCTTTTACAAGT
TTGATCAGGTTTATCAAATATTTAGGTGCTTTGTAAGGGTCAAAGGTTGG
CAAATCTGTCGATTATGTTTGGATTCAAAAGAATTCGTGTGTCCTTCTTT
AAAATCTATGTTGAGAGAAAAGACTTCACGACCTTGAGCTCAAACCATAT
TGGCCTGTTCTTAGACGATTTTAAGCATTCAGTTTGAGTAGTTGACACAT
CGTACATTATTTCGGTTCCTTTCTACCTTTCTTGCGTTTGTTTGATCTAC
ATTCGAAATAACATTCtaagttttgtatttttcttcatCGTTCAGGTCAA
CCACCTTGGTCACCGGTTGTCCCCTACAAAAATCAACTGACGTTGCCATC
CAAAGAACGACTAAGTGCTAGTACGCAAGACTTACGAAATGGTAACATGT
TAAAATACTATGATGGATATCCTCAAGAGAACCACAAGAATCATAATtac
attgaaacaaatgaaTCACTTATTAAAGAAGAAGATTTGATTCGGATCAA
CGTCTGTGGAATGATTTATGAGACTTTGCGAAGCACCCTCCAAAGATTCC
CAGATACGTTACTTGGTGACAAAAGTCGATTGGATTTGTACTATGTTAAA
TCAAgagatttttattattttgataagAACAGACAAGCTTTTGAAGCCAT
TCTGTATTATTACCAAACAGGTGGCATTTTGATTCGGCCGCCCAACATTC
CCATGCCGTTGTTCGCAGAGGAGGTGGCCTTCTTTGACCTTGGTGAAAGT
GTCTTTATGCAGTTACAAAAAGAGGAAGGTTACATATCTGACCAAGAACG
CGTCTTACCGACGAACGAGCTTCAACGGAAAGTGTGGGAGTTGTTCGAAT
TCCCTGATTCTAGTCAAGCAGCACGCATCCTTGCAACATGGTCCGTTCTC
GTTATCATCTTATCCATCACTGTTTTTTGTTTGGAAACTTTGCCACAATA
CTCAGTGAACAACAACAAGCCTCTGACGACTGCTGCACCTTCAGGGAATG
TTACAAACGGTACGCTCTCTGCAACTCCGAGTAAAAGTGAAGGTGAAATG
TACCGTCAACCATGGTTTTCCTTTGAATTAGGCTGCATCATTTGGTTTTC
CTTTGAATATCTGGTGCGCCTTCTCTCATCCCCATCCAAATGGCAATTTG
CCAAATCCTTTCTTAACACCATCGATTTATTGGCCATCCTTCCTTATTTC
ATCACCCTATCCATCAATTCGGAGAACACCACACCGCTATCCGTTCTTCG
GGTGGTCCGGTTGGTTCGTGTCTTCCGTATCTTCAAATTGTCCAGACATT
CACTTGGCTTGCGTATCTTGGGACACACATTACGAGCGAGTATCAGTGAA
TTGGGCATGTTGATATTCTTTCTGTGTCTTGGTGTCATTCTGTTTTCCAG
TGCCATATTCTATGCGGAACAAGGAATGAATGATCAATTCCAAAGCATTC
CCGATGCGTTTTGGTACAGTCTAGTCACCATGACAACCGTTGGATACGGA
GACAAAGTTCCCAAAACATTACCTGGGAAATTTGTTGGAAGTCTTTGTGC
GATCGTTGGCGTGTTGACAATTGCATTGCCAGTACCGGTTATTGTGTcca
attttgagtttttttacaAGCGTGATCGGATGACGTTCGAAAGGAGCAAG
TATAACACACCGTCGGAGAATCAATCCAAACGACAATCACCTGATCAATC
GCCTCAAAGCAATCATAAAGAGAACAACATCAATCATAATCACAACGAAG
ATCCTCTCTTGACAACTACTGTTATGTAAACTTGTTATCACGAGAGAGCT
CCCGCTACATGGTGATTCATGAGTTTTTGTGGCTGCGTAAATAAGAGGAG
GTAAACCATATGGTGATTGGGTTACCTAAATCCGTTCGGTATAGAAAGAA
CACTTTCACTGAAATAGAGatcattaaaattgatgatttaGACAGATGCT
GATCGCCAAGTTTTAActtttaattgtttttcttaATGAAAGTCAATGCT
GTTAGGTCTTAGCGAATCTTCACTGCAAGTGGTGTCTTTCGATTCCTTGT
AATAACAGGAGAAAAGTCTTTAACAAGCAAGTGTTTGAAAACTTAATGTT
GTCATCTTCNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018559-exon-sc0000301-1491911889:336161..336206 | TCONS_00018559-exon-sc0000301-1491911889:336161..336206 | Clytia hemisphaerica | exon |
| TCONS_00018559-exon-sc0000301-1510915933:336161..336206 | TCONS_00018559-exon-sc0000301-1510915933:336161..336206 | Clytia hemisphaerica | exon |
| TCONS_00018559-exon-sc0000301-1575043694:336161..336206 | TCONS_00018559-exon-sc0000301-1575043694:336161..336206 | Clytia hemisphaerica | exon |
| TCONS_00018559-exon-sc0000301-1491911889:349106..350921 | TCONS_00018559-exon-sc0000301-1491911889:349106..350921 | Clytia hemisphaerica | exon |
| TCONS_00018559-exon-sc0000301-1510915933:349106..350921 | TCONS_00018559-exon-sc0000301-1510915933:349106..350921 | Clytia hemisphaerica | exon |
| TCONS_00018559-exon-sc0000301-1575043694:349106..350921 | TCONS_00018559-exon-sc0000301-1575043694:349106..350921 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000301 | supercontig | sc0000301:336161..350921 + |
Blast
BLAST of TCONS_00018559 vs. Swiss-Prot (Human)
Match: KCNA2 (Potassium voltage-gated channel subfamily A member 2 OS=Homo sapiens GN=KCNA2 PE=1 SV=2) HSP 1 Score: 399.823 bits (1026), Expect = 1.061e-131 Identity = 219/438 (50.00%), Postives = 293/438 (66.89%), Query Frame = 1
Query: 166 GYPQENHKNHNYIETNESLIKEEDLIRINVCGMIYETLRSTLQRFPDTLLGDKSRLDLYYVKSRDFYYFDKNRQAFEAILYYYQTGGILIRPPNIPMPLFAEEVAFFDLGESVFMQLQKEEGYISDQERVLPTNELQRKVWELFEFPDSSQAARILATWSVLVIILSITVFCLETLPQYSVNNNKPLTTAAPSGNVTNGTLSATPSKSEGEMYRQPWFSFELGCIIWFSFEYLVRLLSSPSKWQFAKSFLNTIDLLAILPYFITLSI----------NSENTTPXXXXXXXXXXXXFRIFKLSRHSLGLRILGHTLRASISELGMLIFFLCLGVILFSSAIFYAEQGMND-QFQSIPDAFWYSLVTMTTVGYGDKVPKTLPGKFVGSLCAIVGVLTIALPVPVIVSNFEFFYKRDRMTFERSKYNTPSENQSKRQSPD 1446
G+PQ+ + E E ++ IN+ G+ +ET TL +FP+TLLGD + Y+ R+ Y+FD+NR +F+AILYYYQ+GG L RP N+P+ +F+EE+ F++LGE +++EGYI ++ER LP NE QR+VW LFE+P+SS ARI+A SV+VI++SI FCLETLP + N + +N T+ S S + P+F E CIIWFSFE+LVR + PSK F + +N ID++AI+PYFITL + L++LRV+RLVRVFRIFKLSRHS GL+ILG TL+AS+ ELG+LIFFL +GVILFSSA+++AE + QF SIPDAFW+++V+MTTVGYGD VP T+ GK VGSLCAI GVLTIALPVPVIVSNF +FY R+ E+++Y + SPD
Sbjct: 17 GHPQDTYDPEADHECCERVV-------INISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSEEIRFYELGEEAMEMFREDEGYIKEEERPLPENEFQRQVWLLFEYPESSGPARIIAIVSVMVILISIVSFCLETLPIFRDENEDMHGSGVTFHTYSNSTIGYQQSTS----FTDPFFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYFITLGTELAEKPEDAQQGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEADERESQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETEGEEQAQYLQVTSCPKIPSSPD 443
The following BLAST results are available for this feature:
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