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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018558 ID=TCONS_00018558|Name=TCONS_00018558|organism=Clytia hemisphaerica|type=transcript|length=2350bp
CTTTCTCCAAATATTCTTCCTTCTCAAATTGATGGATttgtttcttttcc
tcttttttcttttgttggaTTTTGATAAGGTAAGCCTATGTTCTGTTAAA
TTGAGTTGTTTGTGCTAGTGATTAAAACTTTGATGTAGGGTGCTCATTCA
CATCAACTCATCATTATCATCTTTTTATCACAAGCAAACATGTTGTATTC
TTCCCTCATTTACAACTTTTTCATCGCctcattcttttcttttctcattt
ttctcttttgttgttttgtagCGCTTCTAATTTCTCGACTCTTTTCTGCA
ACGAACTTCAATATGGTTTTTTTCGACGATTTTCGTACGTGAAgctgaaa
aagagagagaggaAGAATTGAAATGGCCTTTTCATTTATGATAGATGtat
caatcaaattttctttataaaagcAGTGCTAGACTATTTCATCAGCAAAA
TCTGCAAAAGTTACTGCAAAAGTTAGATTTGAATGGACTTTCAAGCTCGG
AGACAACTTTTATCAAACCCTTTCACAGCTCAAGGTCAACCACCTTGGTC
ACCGGTTGTCCCCTACAAAAATCAACTGACGTTGCCATCCAAAGAACGAC
TAAGTGCTAGTACGCAAGACTTACGAAATGGTAACATGTTAAAATACTAT
GATGGATATCCTCAAGAGAACCACAAGAATCATAATtacattgaaacaaa
tgaaTCACTTATTAAAGAAGAAGATTTGATTCGGATCAACGTCTGTGGAA
TGATTTATGAGACTTTGCGAAGCACCCTCCAAAGATTCCCAGATACGTTA
CTTGGTGACAAAAGTCGATTGGATTTGTACTATGTTAAATCAAgagattt
ttattattttgataagAACAGACAAGCTTTTGAAGCCATTCTGTATTATT
ACCAAACAGGTGGCATTTTGATTCGGCCGCCCAACATTCCCATGCCGTTG
TTCGCAGAGGAGGTGGCCTTCTTTGACCTTGGTGAAAGTGTCTTTATGCA
GTTACAAAAAGAGGAAGGTTACATATCTGACCAAGAACGCGTCTTACCGA
CGAACGAGCTTCAACGGAAAGTGTGGGAGTTGTTCGAATTCCCTGATTCT
AGTCAAGCAGCACGCATCCTTGCAACATGGTCCGTTCTCGTTATCATCTT
ATCCATCACTGTTTTTTGTTTGGAAACTTTGCCACAATACTCAGTGAACA
ACAACAAGCCTCTGACGACTGCTGCACCTTCAGGGAATGTTACAAACGGT
ACGCTCTCTGCAACTCCGAGTAAAAGTGAAGGTGAAATGTACCGTCAACC
ATGGTTTTCCTTTGAATTAGGCTGCATCATTTGGTTTTCCTTTGAATATC
TGGTGCGCCTTCTCTCATCCCCATCCAAATGGCAATTTGCCAAATCCTTT
CTTAACACCATCGATTTATTGGCCATCCTTCCTTATTTCATCACCCTATC
CATCAATTCGGAGAACACCACACCGCTATCCGTTCTTCGGGTGGTCCGGT
TGGTTCGTGTCTTCCGTATCTTCAAATTGTCCAGACATTCACTTGGCTTG
CGTATCTTGGGACACACATTACGAGCGAGTATCAGTGAATTGGGCATGTT
GATATTCTTTCTGTGTCTTGGTGTCATTCTGTTTTCCAGTGCCATATTCT
ATGCGGAACAAGGAATGAATGATCAATTCCAAAGCATTCCCGATGCGTTT
TGGTACAGTCTAGTCACCATGACAACCGTTGGATACGGAGACAAAGTTCC
CAAAACATTACCTGGGAAATTTGTTGGAAGTCTTTGTGCGATCGTTGGCG
TGTTGACAATTGCATTGCCAGTACCGGTTATTGTGTccaattttgagttt
ttttacaAGCGTGATCGGATGACGTTCGAAAGGAGCAAGTATAACACACC
GTCGGAGAATCAATCCAAACGACAATCACCTGATCAATCGCCTCAAAGCA
ATCATAAAGAGAACAACATCAATCATAATCACAACGAAGATCCTCTCTTG
ACAACTACTGTTATGTAAACTTGTTATCACGAGAGAGCTCCCGCTACATG
GTGATTCATGAGTTTTTGTGGCTGCGTAAATAAGAGGAGGTAAACCATAT
GGTGATTGGGTTACCTAAATCCGTTCGGTATAGAAAGAACACTTTCACTG
AAATAGAGatcattaaaattgatgatttaGACAGATGCTGATCGCCAAGT
TTTAActtttaattgtttttcttaATGAAAGTCAATGCTGTTAGGTCTTA
GCGAATCTTCACTGCAAGTGGTGTCTTTCGATTCCTTGTAATAACAGGAG
AAAAGTCTTTAACAAGCAAGTGTTTGAAAACTTAATGTTGTCATCTTCNN Run BLAST on NCBI transcript from alignment at sc0000301:334113..350921+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018558 ID=TCONS_00018558|Name=TCONS_00018558|organism=Clytia hemisphaerica|type=transcript|length=16809bp|location=Sequence derived from alignment at sc0000301:334113..350921+ (Clytia hemisphaerica)
CTTTCTCCAAATATTCTTCCTTCTCAAATTGATGGATttgtttcttttcc
tcttttttcttttgttggaTTTTGATAAGGTAAGCCTATGTTCTGTTAAA
TTGAGTTGTTTGTGCTAGTGATTAAAACTTTGATGTAGGGTGCTCATTCA
CATCAACTCATCATTATCATCTTTTTATCACAAGCAAACATGTTGTATTC
TTCCCTCATTTACAACTTTTTCATCGCctcattcttttcttttctcattt
ttctcttttgttgttttgtagCGCTTCTAATTTCTCGACTCTTTTCTGCA
ACGAACTTCAATATGGTTTTTTTCGACGATTTTCGTACGTGAAgctgaaa
aagagagagaggaAGAATTGAAATGGCCTTTTCATTTATGATAGATGtat
caatcaaattttctttataaaagcAGTGCTAGACTATTTCATCAGCAAAA
TCTGCAAAAGTTACTGCAAAAGTTAGATTTGAATGGACTTTCAAGCTCGG
AGACAACTTTTATCAAACCCTTTCACAGCTCAAGGTATATCTTCtccgaa
tgtttttctttcgaTAGTTATCATACTGTTACATTTATCCCTCTTTTTTG
ACGAAAGCTTTTATTTTTGCTGAGTTGAATCAAACATGTGCTTAGGGTTC
TTTCCGAAGTTCATTTAACATCCATAAATTCATTAAATTAGCTGGGGAGC
GTTTTCCAACCAAGTTATTGAATTGGACTTCATACTTTTATAGCACAATG
TACTGTGCCTTCTTTCTCGTTCCATTTAAAGCAAACTTTTCTactctttc
aaaacttttttcatgtttAGTGAAGAAGAGTTtggatgttttcaaaaatt
gttgctCTTCTTTTATATTTGCTGGTATCAAGTTTGTAGATAGAATGAAT
CATTTGGTTTTTTCAGCAGTCTCTTTCATTTTATCTTCTTTTCGTATtcc
aaaatattcattcaaaatcCAATTTATTACTACTTTGTAAATGTTTcacc
ctttttctttctttctttctttcttgttctgtttttctttcatttatcAT
TTTGTTCATCTCATCTTGATGGTCAATAATTGGTCGACCTCCTCTCCTTT
CATCTCCTTCTTTATTCACCTTGATGAGCGTTCGACACTCGCTCGTTAGT
GATGGTTTGCTTGGCTTACTACaactttcttcctttttcttcttcttgtt
tttcttaAATCGATCAAGATGTTTTTCCTATTTCAAATTAGTATCGGCTT
GATAATAAAAGCTTTCACTTCACTCTCAAGCGGGGATGGACCGGCCCGAA
AAGTCAGGAAAGGGAGGACCAGAAGGAAAAATGATCTAATTCGTACTCTG
TCTGTCGCCCATTTTTAACCCATTCGCTTTAACTCTGATTTTTCCACCAA
TAATCCAATTAATTTACTTAACTTGCTATCtgtgaaaatattttcccgAG
CATCAAAAATTTCGAGAAGAAAAAAACGACTTGTTTTCCTTACAATCGAA
ACATTGTTTGAGAAATTAAAGGCCGAATAAATTAGTACACGTACTTAAAG
TGCcttaaagcaaaaatatttcagttgaaGATTAGTGTTGAAGATATGAA
GATTGAAGATGATTTTCTAGCGTCCGTAAAGTTTTTTCGTGATGGTAATG
GGTGACATGCAGTTTCTCTTTGCTCTATCACCTCATTGCGCCTTTACATT
GAAACATTCTAACAACAATATTTAAGGGGATAATCTCTTGAGTAATTCGC
GAATAATTTGCCACTATTTAAACTACACAAAACCTGATTGCATAATTAGA
AAAACctcaaagattttccaaacgAATGATTCTTTTTCTTCTCAATTTGT
AGAGCTTGCTGAGCATCCTGAATTTTCGTTTACGTTCTTTAGAGAGGTCC
AACTCATTCCAGTAGATTGATAATTAGttgaatttaattaatttttcttt
aatttttgaccACTGTGCATTAGGTAAAATAAGGAGAGCTCGGCCACTTA
TTGTACAGTGAAAAGAAATTTACCATTAGACTTGGGAGGCGAGACGAAGT
GCTGGcttaagttttttattctttttgaagGGGTTTTGAAAAAGGTGAAG
CAAACTTTTGTCATATTTCAAACAACTAACTTCTTTTTGGTCGGCCTCAT
TTGGATGTTTTTTCAAGGAATACACATGATCGTATGTAGTTCAGACAGAC
ctttttattgttattatttttcaatcgcACCACAGACACCAAAAAATTAT
ACTTGATTGACTTGATGGCCAGGAAACTTTAATAAATTTTCTTCGCTTAG
AAGCTTATAAATTAAAGAAGATGTTTCTACCTCTTCACTTTCCACTTTAA
AATGACCGGAAATCCGGATAAGTTAGGGAAGTTTCTGTGCTTGCAGTATT
TAAACGGTAACTTTTTTGTCCAATTATAATTTCAAAACTATCTTCATTTT
TTACGGTTCTTCGTTTTATTTAATAACAGCTAAACCATAAAGGTTGGAAT
GGCTCACgctgatttgaattttttattaggGAAATATTACAGTTGTTCGC
TTATAGGGAccgcaatgattttttcaaattgtttttagcgCATTGAAACC
ATGCTCATTGGAAAGAGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNAATGCTTCTAAAACTTATCCCATGGTTATAGGTGgt
ctaaaacctaaaaacaacattttggtcgattccaaccattttacccccgt
ctttcgcGGTCCCTATCGCTTAATGTTATGATAAAGATTTTTGTCAACta
catttcaaaacattttggtGATTGCTAAAAGTGTCCTGAGGCATTCTACA
ATAATGTTTTTAAACACTCCTGTGTGTCTTGTATGTAAACAGTTTTTCTT
TATCCAAAATGAAACATCAATAATCTGTTACCCTGTCAACTTCGGTTGGG
ATTGTTTCCTTTACCGAAAAGACGAATGGACTAACCAAGTTTTCGCTTTG
CgtggttttttattttgtcgaGGACATCGGttctttattttctatttcag
ttTTTCGTTTAAACGGTTTTTTCTCCGTAAAATAAGTTTACATTTCTGTT
Cacaatgttttttgttttgaaattggaaaataaagaggaatatattttca
attttgttaatgTTAAAAATGAAGATGGAATCTACTAGCCATAAGGTCAG
GAAACAACTGGGCTTGAAACAAGCTTTCACAAAAGATACAAAACTTTCGA
AGAAGATGACTCGAGTTTAGTCTTGGTTGAGGTACTGTGACATTGTTTTG
AAGTGAAAGAGAAATATTTAAATGACTTCTTGTTGCAGTAAAGCTAACGG
TGAGTCTTTTGACAGCTTCTTCAGTATTTGATCTATCAATAAGTTAATTT
TAGTATCAGTAGATTGAAAGGGTCTTCAATCAGTCGGAATACTGTTACAA
CCTTTTTGATCTGGAACTTCGTAAAACAGTTGAAACTACATAAAAGCTCT
GATTGGATAAAATCCAATAATATTCCTAGAAATCGAAGGTAAGCTTAGTT
TTTCACCATGTATTTCGAGGCTGAAATTATCCAAGCTATCCCCTTTAAGA
TGAATATCTCTTCCCATTAGTTGATGTTGGTTTGATTCTCACTTTGCTCT
TAAGGTCGGCTTCATTCCTTACCACCTTAAAAACGTTGTGCTTCAATATG
CAATGTCTAAATGATTCTTTCTGTTGTTTTCTCGATGatcaattaaaaaa
agaagccaTCAAGTTCTTGTTCCTATACTGTATGTATACGATTTcgtatt
tgattttcaaatacaaaactCGGTTTCAATATTCTATTAGTTCTTTTAGG
CTTGTTTTATTAAACCAATTAGTTCTTTTGGCTATTTGGAACCTGGAATC
GTTAAAAGtgagaacaaaataaaaataattcgatTACGCTCACCGAGTTT
TGAATACAATTCTATTTTCTTCTGATTGGATTTCCAATCTGGTGATATAT
TTTAAACTTAAAAGAATCTCAAgggtttttgtttgtttgtttgtttgttt
gcttgcttATCTTGAAGGTTTAGCTTTTGGGTGGTTTATACTTCAGAAGA
GCAAGTGAGTTAGAGTAATGTTTTGCAGTATGTTGTCACGTTCAAGATGT
CAACTGAATGCTTCTACACCAAATTTTTGTGAGGATATTTCTTATTTATA
CTTATTGTACAATTTTAAACTAAATATATGTAAAGTTCTCTCTAAAGAAG
GTCAGAgggataatatttttttactttttacttgaCTAAACACTTTTACC
CTAGTAAGTGGCGACACAAGGTTTCAGATTAgaaaaaatgccaataaaat
gTCAGCACCCTCTCTTTTCATTCAAAAGTTTAAGCTAGCTAGGTtaggga
gcggtcataaagtatctactagaggggggtggaggatattttgaaaaatc
caaaaaaaatttcgcacaCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtga
aaatattaaactgtaagagcagtatggttgaaagtaacgcccggaatctt
tgagtcaagaaacttggaatttgctttttgtaatttgaaatgttaagTAG
CAGATGCtaaggaggcacaaccatggtttgcgccgacgggcgaaaatttc
aatatttttcagcaccattttagctaaaagacactttgttttgacaaatt
tcttttaagaagtactttttcaaaccactctgatgagctgcgagagccac
taatctacttccctcacttagctcaatgttacaaaccagatgatgcccaa
ataatggCAATATGAAATGTACATATATCCAATAAGATAAATTATGAGTT
GTCGGCCGTAAGGCCGAAAAATTTTTNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNggtagcgaaaacttaggggaaactgtt
aggtttttgagacttgcctTAAGTCACTCGAGGTTTTGAGATGGAGGGAG
ATATGTTCATCTTATTTGGTCATTGGTAGGAACTCTCTACTCATTTCTTC
ACTTAGTGTGAAATATATTGGACATAAATTCGCCCTCTTCGCAGATTATT
CttcaaagtcttttcaaaaaatggcaGAATGAAGAGAAGAAAGATAGATA
AACAAAAGCCCTATAGATCGTAGAATCCTAAATGTGGCAAAATCTGTGTT
TTTCCCCTTTTGCGTTTTTCTTTCGAAGTTTTTTCTATTTGAATGATGTT
GGTCCTGTAGACGGTTTGGTAGGCTAGATCGTGAAGGCTTTTCTCAGTTT
TCTGTGGAGAGGAGAAAATGCATCACCATCGATCTCTCAACAACCTGATG
ATGCAACCTAAACCCGGTAATAACCTTCTTTTCAAACCAATTCTCAAAAT
CGTCTTTCTTATAATTGGCTTTGCCTTACACTCTTCTTTTTGAATCTCCC
AATCACGATTCAGCAATTCTTTTCTGATCTAATTCAGACTCCATACCACA
AATAAAAGAAgagcaatatattttttaacatATTAACCCCTGTCTCCCTG
GTCCGATGAGAATAATTTGCCACCAGTATGAAATCAATGAGCAAACACGT
GCAAAAACCAATTGGGGATGTTTTCTCTTCACCATTAGggtgtaattttt
aaaaagtgtagCTTTTCAATCATGAAATCTCGAGTTGCTTTTTCACCGCA
ACGATTATTTGGGCGACTTTATTTTTCCAGCGGGTACAGATGTCGGTCAG
TGCCTTTGATACAGGGGTGGATATGTaattaaaactgtttttattgATAT
AATTATATAAAGTTAATAATAGCGATGGCTTTTTTCAACGTCGTGAGTCA
TGTTTTGATGTcgaaaagaagagagaaaaaaagcGACGAAGAGACGAATG
GTAAGAGAAGTTCAACACTTGTCCGAGTTCAATATTTTACGGTATTGCCC
GAAGAAACAGTttatgactttttaaagtagattcttttgtgtttaatAAC
ACTCAATAATAACACCCATAAATATATCTATTTCGTTTATTCTAACACCA
TTGGTATTCCATGAGCCCGGAACTTTTTATTGGACTGACCTTCGATGACC
TTCTCTAAAATATAAGTTTAATATTCGTTTAATTTTTTACAGTTTACACG
GGTAGCCAACTCGGTTATAATGCGGACCAAATGGGAACATTGCAAGGTTg
gtgtttcagaaaaaaactcttAATGACAAGGTTGCCAAGGTTACCCCTCG
AATAATCATCAGTTCCGAagtttttaaaagttcaacTCGTTCaacaaagt
aaattttttgagtGATCGCAAAGATGAATAATTATGTAATGCAATAAAAC
CTATAAAAGGcagacactcaattagcggaccctctgattggTGGACCCTC
GGACAAATTCTTTTGCACGAAATTGCAAAAACCCCTATTTTCGCTCTCCA
ATTAGCGAGAATCGAATATCAAACTGGTCAcagattttttctttgaagCA
CGTATTAGTTTTATTATCCAAAttagttttaaaagttttaagtttTCTCT
TGACCCATTCGACGAATTTAGCCGGGCCAACGAAATCATAAACGCTTGCA
CTTCAACCCCCAGCCATCAGCTAGATTCAACCTTTTCCCAGTAGCTCGAG
CTCTGGTTCCGGTATTCTGTTCGAATGATTgctacaatatttttttttca
actatGTTATCTGGTTCATGTTTGCAAACTAGTGATTTCCCCTATGAACG
GAGTCCAAATCTGACGATCCCTTTCTACCTTTCTTGTAAGTACGGTACCC
TCTGACTTTCAAGTTAATCTTGTTCAACTTCTATTTTTGTGTTATATTAT
ATTTCTATAGACATTCTTTAAATCGTGAAAATTAAATTGTTGCGTCTCAA
taacctttctcttgttcttctatgTCCTAGTGTCCTGCACAAGTTCTAAA
GACTCCCttacaccctgggatggcctaatttcaaaattggagctcttaga
tgaaaaagttctaaaatttgGACGCTTCTAGTTAGCGGACGTTTCTCCGG
TGGTatccgctaattagaggctcCATCGGTGTCAAGTCAATGTAGAAGAG
GGGTTAGAAAACGATTTTTCTAATCTTCTggagaaaaaaagacaaatgaa
tCAATTTTACTTGAACAGGAAAAAAGAGATGTgagagaaaaaagtttttt
atttgagggTTGATCGTGGTTGTGGTCATCTTTCGACCGCATGTTTTACG
GTTTTTTGTGTTCGAAGGGTTTTAAAAACGTTGACAGAAAATGAGATAAA
AAGAGCGaagtagaaaaaagaaaaaagaatggaGAAAAGGAATCATCAAG
CAGAATGGAAATTGGAAAATATGTGGAAAGTTTTTCTGTTaagaaaatag
ataaaaattgTTGTTGATGTTagtttataaaacaaaaaaaatcatgaagA
TTTTCCTTTCGAACTAATTAGAATGTCATTCTTTAGAAACGCCTTTCGAG
AAGTATCTTTGATTTTCACAGCTCAAAGTTTTCTTTTGACTTTTAGGAAG
TCACAGTCTTTTTGTCTTCTGTTTTTGCAGTTAACTTCTTTTTTGGTGAT
ATTTCTACTGTATGATCTCTAATATCTTGGGGAGCAACATGCTGCTATTT
AAAATGATTACTATCCCTTCCTAAACAAAATAGTTATTGATTGGAAACAC
ATCAAATCGAAATCCAATTTCAGTATATAGATTCCTAGCTGGTAAACATT
TCAAACGTTGTATATGGGCgtattttgttgttattttaTGGGCGTATGGG
GGTGGGGTAaggggatgtgccgctggtccAGGTAACTTAGGAAGTgttca
taaagtatctactagaagggggtggaggatttttccaaaaatcggaaaaa
aaattcgcACCCCTATGTTCAAAGATTTTTCGAACCTCCCCCTTAACCAA
GCCAAAAacttttcccccccccccccttaaccaagccaaaaacttttccc
ccccccccccttaaccaagccaaaaacttttcccccccccccccttaacc
AAGCCAATAACTTTTCTCACCCCCTCCCCTccctaagaaaattttttaat
aaataccCCCCTCTCGTGCAATCCTTGCCTTGTTCATAAGTTAGATGAAA
GTTGCTGAAATGTGAAATTGGATTTCAAACATCGCTTCCGGAACTTTACA
ATCTCATTTATATCCTTTAATTTTTGTCTGttctttttgggaaattttat
CGTAGCGAGTGTTATAACTGAGGCGCAACCGTTTTGCGccgacaaagaaa
attttaaaattttaacccTCTCATTTAGCTAGGTGACCCTAGGTGCTTCC
TGTTAGTGCGAGAGTTATTGAAAACAAGACTAAGATTTCAAGCTATATTA
cttaaaaattgagatttttgcaGCATGCAAAGACCATATATGCAAAGACA
AATAATAGATTATGATTGGtgtaaagttttaaagaaaagttttcaaaaaa
ggcTCTGATAAATGGTTGAAAAACACTTGATTTTTGAATCAACCTGGTGG
GATGTCAAAacaatttccccccccccccctaaagaTAAGATGgcaaaaaa
ttatctttcacCGTACCTTTTTTTTCTGGCACTTTACTAATGATTTTTTT
AGCACGGGTGAAAAGAAATCAGCAACGTGTATTTGACAGACCTCCCTGTT
GAACTGGTTGTGTTTAATCATTCTTTTCTGTGATTTTCCCTTTCAACCTG
GAAAAGGGTGATGATATGGCTCTAAACGAACCTTTTCAATATTTGGCCAC
TTTCAGGAAATTCTAATTCAAAAGCTGATATCGatagcaaaaataagaaa
aaagcgaaaatgaaaagttgaaagaaaaataaaatcgaaCTGGAAGAGAA
ATATAGAATTTcatctttttgtactttttttttGTACTTTCTTTTCTTCT
GAAGGGAATATATTTCCCTATATATATCGTACTTTTCTCTAGCAAtggga
tttgaaaataatataacttttttgggacttttcttttttctttttccaat
ttCAGCCGTTTTTTCTTTCGATTTACACCTTCCATCGAAttacttttttc
ttgaaaaccGTTTGTTTGGGGAAGAAATTGGTTAATGAAAAAAGCCCCCA
CTCGACAAAGAAACGTGAGGAAAAAACACTTTAATAGGATTGATATAGCG
AAAAGaagttttaaataaataaacataaatTTGATAACAAGAAAGCCTGT
TTCTAATAAGCAGATGGCAGcattaaaaacaaacattttatcCAACTTTG
GATACTGTTTCTACAATCGCCTTTCCTTACATCTTTATGTGCCTGCTATA
TCTTATGTAAAGACGTGAGGAAAGTTTGAGAGAGAAAATGAACGAGAGCT
TGTTGAAAGGTGAATGAAGGGTAATCCCTCTTTTGGCCTTCTTTCTTATT
TACTCCTTCTCCTAGTTGAAACTTGACTCGAATTGTTATCAAATCAAACA
TGGAAGGATCATTTCATAGTTTCACTTCATTAAATCatcttttttcattc
ttttatttcgtttttcttcctttttaaaaatattgttcctcgaacaaaaa
cttttcatttacGATTTGATGAAGGACAAAATAAGTTTATTCACCCTCTA
CCCGAACaagaacaaatttctagttGACTGTGTTTTCAACCTGATGTTCT
TTTCACTTAACACCCTATGCTAGATATTTCCCCATTATGCAAACTATCCC
TATTTATTCATTCTAAGTACTAATGAACTTTGTCTTTTTTCGAGCcttga
tgttttttttcctCTTCAATTTTGAGATGATTTTTTGCGTTCAAATTAGA
AGGAAGatatttgagcaaattttattattttaacacGGGAAATTAGAATA
GAATGGTTGCTGACTTTTAAGGTGAAGATTAGATGACCTTTTACAAGTTT
GATCAGGTTTATCAAATATTTAGGTGCTTTGTAAGGGTCAAAGGTTGGCA
AATCTGTCGATTATGTTTGGATTCAAAAGAATTCGTGTGTCCTTCTTTAA
AATCTATGTTGAGAGAAAAGACTTCACGACCTTGAGCTCAAACCATATTG
GCCTGTTCTTAGACGATTTTAAGCATTCAGTTTGAGTAGTTGACACATCG
TACATTATTTCGGTTCCTTTCTACCTTTCTTGCGTTTGTTTGATCTACAT
TCGAAATAACATTCtaagttttgtatttttcttcatCGTTCAGGTCAACC
ACCTTGGTCACCGGTTGTCCCCTACAAAAATCAACTGACGTTGCCATCCA
AAGAACGACTAAGTGCTAGTACGCAAGACTTACGAAATGGTAACATGTTA
AAATACTATGATGGATATCCTCAAGAGAACCACAAGAATCATAATtacat
tgaaacaaatgaaTCACTTATTAAAGAAGAAGATTTGATTCGGATCAACG
TCTGTGGAATGATTTATGAGACTTTGCGAAGCACCCTCCAAAGATTCCCA
GATACGTTACTTGGTGACAAAAGTCGATTGGATTTGTACTATGTTAAATC
AAgagatttttattattttgataagAACAGACAAGCTTTTGAAGCCATTC
TGTATTATTACCAAACAGGTGGCATTTTGATTCGGCCGCCCAACATTCCC
ATGCCGTTGTTCGCAGAGGAGGTGGCCTTCTTTGACCTTGGTGAAAGTGT
CTTTATGCAGTTACAAAAAGAGGAAGGTTACATATCTGACCAAGAACGCG
TCTTACCGACGAACGAGCTTCAACGGAAAGTGTGGGAGTTGTTCGAATTC
CCTGATTCTAGTCAAGCAGCACGCATCCTTGCAACATGGTCCGTTCTCGT
TATCATCTTATCCATCACTGTTTTTTGTTTGGAAACTTTGCCACAATACT
CAGTGAACAACAACAAGCCTCTGACGACTGCTGCACCTTCAGGGAATGTT
ACAAACGGTACGCTCTCTGCAACTCCGAGTAAAAGTGAAGGTGAAATGTA
CCGTCAACCATGGTTTTCCTTTGAATTAGGCTGCATCATTTGGTTTTCCT
TTGAATATCTGGTGCGCCTTCTCTCATCCCCATCCAAATGGCAATTTGCC
AAATCCTTTCTTAACACCATCGATTTATTGGCCATCCTTCCTTATTTCAT
CACCCTATCCATCAATTCGGAGAACACCACACCGCTATCCGTTCTTCGGG
TGGTCCGGTTGGTTCGTGTCTTCCGTATCTTCAAATTGTCCAGACATTCA
CTTGGCTTGCGTATCTTGGGACACACATTACGAGCGAGTATCAGTGAATT
GGGCATGTTGATATTCTTTCTGTGTCTTGGTGTCATTCTGTTTTCCAGTG
CCATATTCTATGCGGAACAAGGAATGAATGATCAATTCCAAAGCATTCCC
GATGCGTTTTGGTACAGTCTAGTCACCATGACAACCGTTGGATACGGAGA
CAAAGTTCCCAAAACATTACCTGGGAAATTTGTTGGAAGTCTTTGTGCGA
TCGTTGGCGTGTTGACAATTGCATTGCCAGTACCGGTTATTGTGTccaat
tttgagtttttttacaAGCGTGATCGGATGACGTTCGAAAGGAGCAAGTA
TAACACACCGTCGGAGAATCAATCCAAACGACAATCACCTGATCAATCGC
CTCAAAGCAATCATAAAGAGAACAACATCAATCATAATCACAACGAAGAT
CCTCTCTTGACAACTACTGTTATGTAAACTTGTTATCACGAGAGAGCTCC
CGCTACATGGTGATTCATGAGTTTTTGTGGCTGCGTAAATAAGAGGAGGT
AAACCATATGGTGATTGGGTTACCTAAATCCGTTCGGTATAGAAAGAACA
CTTTCACTGAAATAGAGatcattaaaattgatgatttaGACAGATGCTGA
TCGCCAAGTTTTAActtttaattgtttttcttaATGAAAGTCAATGCTGT
TAGGTCTTAGCGAATCTTCACTGCAAGTGGTGTCTTTCGATTCCTTGTAA
TAACAGGAGAAAAGTCTTTAACAAGCAAGTGTTTGAAAACTTAATGTTGT
CATCTTCNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018558-exon-sc0000301-1491911889:334113..334646 | TCONS_00018558-exon-sc0000301-1491911889:334113..334646 | Clytia hemisphaerica | exon |
| TCONS_00018558-exon-sc0000301-1510915933:334113..334646 | TCONS_00018558-exon-sc0000301-1510915933:334113..334646 | Clytia hemisphaerica | exon |
| TCONS_00018558-exon-sc0000301-1575043694:334113..334646 | TCONS_00018558-exon-sc0000301-1575043694:334113..334646 | Clytia hemisphaerica | exon |
| TCONS_00018558-exon-sc0000301-1491911889:349106..350921 | TCONS_00018558-exon-sc0000301-1491911889:349106..350921 | Clytia hemisphaerica | exon |
| TCONS_00018558-exon-sc0000301-1510915933:349106..350921 | TCONS_00018558-exon-sc0000301-1510915933:349106..350921 | Clytia hemisphaerica | exon |
| TCONS_00018558-exon-sc0000301-1575043694:349106..350921 | TCONS_00018558-exon-sc0000301-1575043694:349106..350921 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000301 | supercontig | sc0000301:334113..350921 + |
Blast
BLAST of TCONS_00018558 vs. Swiss-Prot (Human)
Match: KCNA2 (Potassium voltage-gated channel subfamily A member 2 OS=Homo sapiens GN=KCNA2 PE=1 SV=2) HSP 1 Score: 399.053 bits (1024), Expect = 1.763e-129 Identity = 219/438 (50.00%), Postives = 293/438 (66.89%), Query Frame = 3
Query: 654 GYPQENHKNHNYIETNESLIKEEDLIRINVCGMIYETLRSTLQRFPDTLLGDKSRLDLYYVKSRDFYYFDKNRQAFEAILYYYQTGGILIRPPNIPMPLFAEEVAFFDLGESVFMQLQKEEGYISDQERVLPTNELQRKVWELFEFPDSSQAARILATWSVLVIILSITVFCLETLPQYSVNNNKPLTTAAPSGNVTNGTLSATPSKSEGEMYRQPWFSFELGCIIWFSFEYLVRLLSSPSKWQFAKSFLNTIDLLAILPYFITLSI----------NSENTTPXXXXXXXXXXXXFRIFKLSRHSLGLRILGHTLRASISELGMLIFFLCLGVILFSSAIFYAEQGMND-QFQSIPDAFWYSLVTMTTVGYGDKVPKTLPGKFVGSLCAIVGVLTIALPVPVIVSNFEFFYKRDRMTFERSKYNTPSENQSKRQSPD 1934
G+PQ+ + E E ++ IN+ G+ +ET TL +FP+TLLGD + Y+ R+ Y+FD+NR +F+AILYYYQ+GG L RP N+P+ +F+EE+ F++LGE +++EGYI ++ER LP NE QR+VW LFE+P+SS ARI+A SV+VI++SI FCLETLP + N + +N T+ S S + P+F E CIIWFSFE+LVR + PSK F + +N ID++AI+PYFITL + L++LRV+RLVRVFRIFKLSRHS GL+ILG TL+AS+ ELG+LIFFL +GVILFSSA+++AE + QF SIPDAFW+++V+MTTVGYGD VP T+ GK VGSLCAI GVLTIALPVPVIVSNF +FY R+ E+++Y + SPD
Sbjct: 17 GHPQDTYDPEADHECCERVV-------INISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSEEIRFYELGEEAMEMFREDEGYIKEEERPLPENEFQRQVWLLFEYPESSGPARIIAIVSVMVILISIVSFCLETLPIFRDENEDMHGSGVTFHTYSNSTIGYQQSTS----FTDPFFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYFITLGTELAEKPEDAQQGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEADERESQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETEGEEQAQYLQVTSCPKIPSSPD 443
The following BLAST results are available for this feature:
|
