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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018500 ID=TCONS_00018500|Name=TCONS_00018500|organism=Clytia hemisphaerica|type=transcript|length=2061bp
acaaaatgtaGCTGGTTGTAGCTGGTGGGTTGGAAGTGCAAATAACATCT
CTCATGGATTGGGTACAGGTACACAAAAAGAGGAAGAAAAGCGAAACAAA
AAGTTCGCCAAACAACAGCAGCTTCTTTACgacctcctcctcctcctcct
cctcatCGTCGACAAGAAAGGCGATGGTGACACCAAAAGTCTCTCGCTCA
TTAATCCTCATCTCAAGCACATCAAATCTTTTTGATCAACAAACGGCACA
ACACGATCATATAAAATGCAGACCAGATGGCGTGCACCACGAGAAAGAAA
TAGAACAGAGCTATCAATACCACACGCCACACACTTCTATCAACCCTCAA
GTCAACCAGCAAATTTTCATCGGTAACCTCAAACACGATATGGAGGACAT
CACTTTAGTAAGGAAGTTACAACAACTTTTCAAAGACAGCGTGGACCTAG
AAATACCAGAATTTCGGTTCACTATATTTCAGCGCGATTCGAAGAAACAC
CCACGCAAGTATGGCTATCTAAATTTGGCCACTTTGCGCGATGAAGAAAA
AGCTTATAAACTTGACGGGTTGACAAATTTAGATTTTGTTATCGAAGGAC
TTGCACTTAATGTTAACAAACGGCTTTCAACGCGGAACCGCGTCACGAAA
TGGAACAAATTAACGTTTAATGGGCGCAGACGTTTGGTCAATAGAAGTCG
TTCTGATACAGATGTCCAAGCTGAcgacaaatcaaatttaaaagctCAAA
GCTCTAAACGTGAGTTAATGTACGGGCAAAATTTGCCCAGTGAAGACCGC
GTGACGGAATACAAGAAAGGAGGTGGTAACTACTTGAGGTGTACTCTTAT
TCAACATGTTCGAAAATACGTGTGTGCTTTCCTCAACAGTGAAGGTGGAA
GGCTTATGATAGGTGTCGATGACACGTGCAAAGTGTTTGGTGTGAGTTGT
ACACGAAAACAAGAAGATTTGGCACGCTGCCAAATTGACAACACAATCAA
ACAGTTTCAACCGCACGTTGCACCTCACATGTACATGGTGGAATTCATCC
CTGTACGCTTGGTACCTCATGATAATGTGGAATTCGATTGCATTGATCCT
TTGCTCAAAGTGTTGAAAATATCCGTCGTCCGACAAAACATGATGGCCGC
CACACTTTACGTCaatgataaagaaaatattttcttacgaCGTGACGGCA
GTGTTGAAGGACCTTTGAAAATTCCACAAATCATCGAATGGTGTCGCACA
CAATTCTCGCAAAATAACATCCCTCACAACGATCAAGACACTCCCGCACT
TTTGAGCCATTCTAATAGTGTCAACTTCGAAAAGATATTAGATCAGTTAT
CAAAGAGACAGAATGAAGTACTGGCACAAATGGAAGAAAGCTTTCATTCA
GCAAGTATGGAGCTTCAAGAGAAAATCAAACTCCTGCAAGTGGTTATCAA
CACGAAAGAAAACCAAGTCACACAAATCACACAAAATCTCTTCGACGCTC
TTAAAAGACTGGAACAAGAAAGGAAAAGGCAAAAGCATCGCACTGATTAC
ATGTGTACAATCTGCTAACGTAAATCTTAGgaatgaaagaagaaaacaat
TCAAGCAATCTAAAAAATTTGCGATTTCAATTCCTATATCTTCCCTATAA
ATGAGTGCGCCATAAAGtagaattaaaaataaatatcttaAAGCAAtaca
attattaaaaaatatcgTATATAATTTGCATGTAAATTGCTAAATTTGGA
TAAGAGTAGCTTCTCAATAAtataaatttcaaacaaaattggcagtttga
aaaattcgaAGTGTACGAACAAATTTGTCACACAAAAATTGAGCACTTTT
AGTGGTAGCAATAATGGTATTCTAAATcaagaaaaagggaaaaaatctAG
AGAATAATTTTCCTCATTTTACAAATGGTTTTGACCAGCCCCTCATCCAT
CGATTGTTTTTGCGCGATGGAAGTAAATCTGAAGATAAATAAATGTGACA
ATCATTAGTAATTTGGGTGGAACTAAACTAATATGCGGGGAAGAATGATT
TAGgaattgga Run BLAST on NCBI protein sequence of TCONS_00018500-protein >TCONS_00018500-protein ID=TCONS_00018500-protein|Name=TCONS_00018500-protein|organism=Clytia hemisphaerica|type=polypeptide|length=504bp
MDWVQVHKKRKKSETKSSPNNSSFFTTSSSSSSSSSTRKAMVTPKVSRSL
ILISSTSNLFDQQTAQHDHIKCRPDGVHHEKEIEQSYQYHTPHTSINPQV
NQQIFIGNLKHDMEDITLVRKLQQLFKDSVDLEIPEFRFTIFQRDSKKHP
RKYGYLNLATLRDEEKAYKLDGLTNLDFVIEGLALNVNKRLSTRNRVTKW
NKLTFNGRRRLVNRSRSDTDVQADDKSNLKAQSSKRELMYGQNLPSEDRV
TEYKKGGGNYLRCTLIQHVRKYVCAFLNSEGGRLMIGVDDTCKVFGVSCT
RKQEDLARCQIDNTIKQFQPHVAPHMYMVEFIPVRLVPHDNVEFDCIDPL
LKVLKISVVRQNMMAATLYVNDKENIFLRRDGSVEGPLKIPQIIEWCRTQ
FSQNNIPHNDQDTPALLSHSNSVNFEKILDQLSKRQNEVLAQMEESFHSA
SMELQEKIKLLQVVINTKENQVTQITQNLFDALKRLEQERKRQKHRTDYM
CTIC Run BLAST on NCBI transcript from alignment at sc0000301:156096..162190+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018500 ID=TCONS_00018500|Name=TCONS_00018500|organism=Clytia hemisphaerica|type=transcript|length=6095bp|location=Sequence derived from alignment at sc0000301:156096..162190+ (Clytia hemisphaerica)
acaaaatgtaGCTGGTTGTAGCTGGTGGGTTGGAAGTGCAAATAACATCT
CGTAAGTATATTTcccatttttttcacttttctgttttcttttctaATAG
GACATGATTTCATGCGAAGAGCTATCTTTTTCACCTCGATGAGAATTCGG
TTTAGGGAAAACAGAAAATACCGTTCTCTATtatgaaaacaaaggaaaaa
acaAACTCGACTACGTTGCGGCTCGGTTATCATATTCAAGATTTTGTTGC
ACATTAAATTagtaaactaaaataaaaagtcgttACAAATTTCTTAATTA
GTTTGGTAATGATAATTTGATCTAGTGCTTTGGTTTGTTCTTGCATATTT
GTGAATTATGGGTCTGCAATGTTTCCACGGAACCAACCTGCTGTTCATTG
TTCCCGTGGCTCTGTTGTCATACATTTATCTTTTTTGTTGTACAAACATT
GGTTGCATGTCTCACTGAACTCCAGTGACATTGGGAAACAGGCTTGACAG
TTAGCTAATCCGTTGGAGCATTGGAGGAAGTAGTGTGGGTTGTATCGGCT
GTAGTAGTGGTACTCAAAGTTTCCGTCAGCTTTTCCTTTGCAGAGGGAAT
CTGGACATGGAACATGTGGTGGTGCTGTGTAGGCGACTGAAATTATAGGA
AAATAATTTATTGATTGAGCTTCCTCTTGTAACACTCTTGAGCATACTGA
AACGAAGGTTTTGTCATATTCCATAAGATCCAATTCTTGGATACACATGC
ACAAGAAGACCgactttcgaaaataaaaattaatatcGTCGTAGAATGAC
AAATTTTCTCAATCTTTGAAAGTGTTTGGTGGGGGTTTTGGTAtaatttt
ataaagaaaaaaactttacttACCAGCCAAGAGAGCGATGAAAATAAAAG
CATTCATACTCTTCAACTATTGTCTTGGTTTGCTTTTtgctttgtttgat
ttttcacaGCAATTTTAAGTTGCAATTTGTTTCCAGTTGAATTGAGTTGA
CCTTTTTATATGTTCGCTTTGATACAATTAAAATCGACTAACTGGTATAC
TGTTATGTAAGATGATGTTGTCTGATCGAATTAGCTTTTTACCTTGAAAC
AATTAGcatatactctcgggtacctaatagccggggggtttggaataagc
ggggggggggggggggaaaaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTCTAGGAAgt
gccattcgcgaaagtttatgctcgcgaaatattcttgacaaaatagaaaa
tctgtaaaatttcaaactttgaataaaatgtaacttttattaCACTTTTT
AGCtcgctaaaagactaataagtcaaaggacaaatgtttcaggcaatcca
agaagtatttgttcctctaagccattttttcatgtgaaaattctcagttt
tacgtcttgattcgcgaaagtttgtgctcacgaaaaatatttctccgtta
aattcgcgaaagtaaatgttgtgaatttcgcgatttttcgtcctcgtgaa
agtttctgctcgcgaaagtttgtacgcctaaagtattatGTAACAAGCCC
GGGAGGGACTTACGGTacatttaaatatctttttgttCATAAGGGAAGAC
GAATTTAGTTTCTTGTTCTACGGGAAAACCTTCAGAAAATTCTGGGTCGG
TCGGCCGgtaagatgttcttaacatgttcttattttccccatttttggga
tatttttgcccattttcctaaggaatcgggtgttttagagtccccaaagc
cttaaaatgttcttaacttgttttaacattttggctatcgaagccttgtt
tgttcttataaaaaacgtgtatagagCATGATTACAGATCAGATTTATTT
TCCAAGATGTTGCCCGAAAAACTtcgttttccttattttttttcacGCTT
ACCTTACACGAGTGCCCCATCCCCCCCCATGGTAACGAGTTAATCAAACT
TAGATAGTATTTTTTACGAATTGTTTAGTTCTAGGGAAAACATTTTATTC
GTGAACTTTTGTGGCTAACAATTTCCGATTTTCGAAGCAATGGTTTTCGA
GAGACAAAGGGTATTTATTAATTGAATCAGATCATGAAGCTTCTCGTGGT
TGTTGTATAAGTAGATTTATGATGAAAACGCATTATGTAAGCAACACTTC
ATCTGGTTAATCCAATTTGCGTCACTTCGGGGATGAGTTCCTtgacatca
aatttttcaagaaGTTCCAAACTTTGGTTTCTGCCAGGCACCAGCGGAGG
TGAATGAGGCAAAAACAGCTTAGCAACGACGTCATTTCAGcatgattttc
aaatcaaatgaatggGGCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAAA
GCCTGTCGGATTTTGAAAGGTGCAAGTGTCGGATGACTTGTCTCGATGAA
TGTAAAGTTTGAGATTGATTCCTTTTGGATGTTGGTACATGAATCATATT
CAAATTCACCAATCAAAACCCCACAGTGATAGCATAAGCACGAAGAAAGA
TATATCAGCTTCTTTGGTTGTTATGCAAGCCATGTcgggaaaaaaacttt
tgacgCCATGttgaaaatcaccaaaattcaaatttttggcgGCAACGCGC
TCTCTGCAAAAAGGAAAAAGCCGcgctttgtttttgaaacaatgaGTTCT
CCGTCCAGTCGTTAGAAGTTCATGctgttttcaagattttgagagaaaga
agcttttacaaaaatattccgaaaatttattaatttttgtttggcAAAAG
ATACACCAATTagtgcgaaaaatttttcaaaatgttttttcttcgccgaa
actaagatCCTCAAAGTTTAAACACTtgtcttcgcaaaagtcttcttctt
catcaaatttttttccatGTGATTTTTACCTTTTACCTTTTATGTTTTTT
CGTAGTTTCCTTAGATAAAAAGTGAACCTGTGGTGAAGAGATAGGAAGGA
TGAATCCTATCCCGGGATAGTTACCTATTCTAAGATAGTTTTAAAACCGT
TGGCCTTTTTCTAGCGGCACAACAGAGCCATAACGCAATAATCTACCCTG
GGACAAACAAAACCGTTtaaggagatatttgagttaTAGAAGTTTCGGTT
ATGTACACTGTAGTTCTAAATGATCACACATCGTATCAAATCTGATTGTT
CTGTTTTCTAGTCATGGATTGGGTACAGGTACACAAAAAGAGGAAGAAAA
GCGAAACAAAAAGTTCGCCAAACAACAGCAGCTTCTTTACgacctcctcc
tcctcctcctcctcatCGTCGACAAGAAAGGCGATGGTGACACCAAAAGT
CTCTCGCTCATTAATCCTCATCTCAAGCACATCAAATCTTTTTGATCAAC
AAACGGCACAACACGATCATATAAAATGCAGACCAGATGGCGTGCACCAC
GAGAAAGAAATAGAACAGAGCTATCAATACCACACGCCACACACTTCTAT
CAACCCTCAAGTCAACCAGCAAATTTTCATCGGTAACCTCAAACACGATA
TGGAGGACATCACTTTAGTAAGGAAGTTACAACAACTTTTCAAAGACAGC
GTGGACCTAGAAATACCAGAATTTCGGTTCACTATATTTCAGCGCGATTC
GAAGAAACACCCACGCAAGTATGGCTATCTAAATTTGGCCACTTTGCGCG
ATGAAGAAAAAGCTTATAAACTTGACGGGTTGACAAATTTAGATTTTGTT
ATCGAAGGACTTGCACTTAATGTTAACAAACGGCTTTCAACGCGGAACCG
CGTCACGAAATGGAACAAATTAACGTTTAATGGGCGCAGACGTTTGGTCA
ATAGAAGTCGTTCTGATACAGATGTCCAAGCTGAcgacaaatcaaattta
aaagctCAAAGCTCTAAACGTGAGTTAATGTACGGGCAAAATTTGCCCAG
TGAAGACCGCGTGACGGAATACAAGAAAGGAGGTGGTAACTACTTGAGGT
GTACTCTTATTCAACATGTTCGAAAATACGTGTGTGCTTTCCTCAACAGT
GAAGGTAAGCAATTCAtttattatttgtttgtttgacaAGCTTTTGATGT
GAAACCCTCTAATGTTTTATTTATCATGACAATCAATTAAAAAGACAAGA
CCCTCTTCTTTTATAGGTGGAAGGCTTATGATAGGTGTCGATGACACGTG
CAAAGTGTTTGGTGTGAGTTGTACACGAAAACAAGAAGATTTGGCACGCT
GCCAAATTGACAACACAATCAAACAGTTTCAACCGCACGTTGCACCTCAC
ATGTACATGGTGGAATTCATCCCTGTACGCTTGGTACCTCATGATAATGT
GGAATTCGATTGCATTGATCCTTTGCTCAAAGTGTTGAAAATATCCGTCG
TCCGACAAAACATGATGGCCGCCACACTTTACGTCaatgataaagaaaat
attttcttacgaCGTGACGGCAGTGTTGAAGGACCTTTGAAAATTCCACA
AATCATCGAATGGTGTCGCACACAATTCTCGCAAAATAACATCCCTCACA
ACGATCAAGACACTCCCGCACTTTTGAGCCATTCTAATAGTGTCAACTTC
GAAAAGATATTAGATCAGTTATCAAAGAGACAGAATGAAGTAAGTTAGAT
CGAATTTATTCAAATGATCATCAATGAAAAGTGATTTTCAAACGCTGCTT
CCTGATCATTGTTAGAAGCACGACTATAAGGAGTACGAGTAATAAAATAA
GTTTAATAAGTAGTAAGTCtatcttttattttctttggtACTGCATCACG
AGGTCCGTTAAGACAATAATATGAACAATAATAGCAATATGAATTCAACA
GGTACTGGCACAAATGGAAGAAAGCTTTCATTCAGCAAGTATGGAGCTTC
AAGAGAAAATCAAACTCCTGCAAGTGGTTATCAACACGAAAGAAAACCAA
GTCACACAAATCACACAAAATCTCTTCGACGCTCTTAAAAGACTGGAACA
AGAAAGGAAAAGGCAAAAGCATCGCACTGATTACATGTGTACAATCTGCT
AACGTAAATCTTAGgaatgaaagaagaaaacaatTCAAGCAATCTAAAAA
ATTTGCGATTTCAATTCCTATATCTTCCCTATAAATGAGTGCGCCATAAA
GtagaattaaaaataaatatcttaAAGCAAtacaattattaaaaaatatc
gTATATAATTTGCATGTAAATTGCTAAATTTGGATAAGAGTAGCTTCTCA
ATAAtataaatttcaaacaaaattggcagtttgaaaaattcgaAGTGTAC
GAACAAATTTGTCACACAAAAATTGAGCACTTTTAGTGGTAGCAATAATG
GTATTCTAAATcaagaaaaagggaaaaaatctAGAGAATAATTTTCCTCA
TTTTACAAATGGTTTTGACCAGCCCCTCATCCATCGATTGTTTTTGCGCG
ATGGAAGTAAATCTGAAGATAAATAAATGTGACAATCATTAGTAATTTGG
GTGGAACTAAACTAATATGCGGGGAAGAATGATTTAGgaattgga Coding sequence (CDS) from alignment at sc0000301:156096..162190+ >TCONS_00018500 ID=TCONS_00018500|Name=TCONS_00018500|organism=Clytia hemisphaerica|type=CDS|length=4545bp|location=Sequence derived from alignment at sc0000301:156096..162190+ (Clytia hemisphaerica)
ATGGATTGGGTACAGGTACACAAAAAGAGGAAGAAAAGCGAAACAAAAAG
TTCGCCAAACAACAGCAGCTTCTTTACgacctcctcctcctcctcctcct
catCGTCGACAAGAAAGGCGATGGTGACACCAAAAGTCTCTCGCTCATTA
ATCCTCATCTCAAGCACATCAAATCTTTTTGATCAACAAACGGCACAACA
CGATCATATAAAATGCAGACCAGATGGCGTGCACCACGAGAAAGAAATAG
AACAGAGCTATCAATACCACACGCCACACACTTCTATCAACCCTCAAGTC
AACCAGCAAATTTTCATCGGTAACCTCAAACACGATATGGAGGACATCAC
TTTAGTAAGGAAGTTACAACAACTTTTCAAAGACAGCGTGGACCTAGAAA
TACCAGAATTTCGGTTCACTATATTTCAGCGCGATTCGAAGAAACACCCA
CGCAAGTATGGCTATCTAAATTTGGCCACTTTGCGCGATGAAGAAAAAGC
TTATAAACTTGACGGGTTGACAAATTTAGATTTTGTTATCGAAGGACTTG
CACTTAATGTTAACAAACGGCTTTCAACGCGGAACCGCGTCACGAAATGG
AACAAATTAACGTTTAATGGGCGCAGACGTTTGGTCAATAGAAGTCGTTC
TGATACAGATGTCCAAGCTGAcgacaaatcaaatttaaaagctCAAAGCT
CTAAACGTGAGTTAATGTACGGGCAAAATTTGCCCAGTGAAGACCGCGTG
ACGGAATACAAGAAAGGAGGTGGTAACTACTTGAGGTGTACTCTTATTCA
ACATGTTCGAAAATACGTGTGTGCTTTCCTCAACAGTGAAGGTGGAAGGC
TTATGATAGGTGTCGATGACACGTGCAAAGTGTTTGGTGTGAGTTGTACA
CGAAAACAAGAAGATTTGGCACGCTGCCAAATTGACAACACAATCAAACA
GTTTCAACCGCACGTTGCACCTCACATGTACATGGTGGAATTCATCCCTG
TACGCTTGGTACCTCATGATAATGTGGAATTCGATTGCATTGATCCTTTG
CTCAAAGTGTTGAAAATATCCGTCGTCCGACAAAACATGATGGCCGCCAC
ACTTTACGTCaatgataaagaaaatattttcttacgaCGTGACGGCAGTG
TTGAAGGACCTTTGAAAATTCCACAAATCATCGAATGGTGTCGCACACAA
TTCTCGCAAAATAACATCCCTCACAACGATCAAGACACTCCCGCACTTTT
GAGCCATTCTAATAGTGTCAACTTCGAAAAGATATTAGATCAGTTATCAA
AGAGACAGAATGAAGTACTGGCACAAATGGAAGAAAGCTTTCATTCAGCA
AGTATGGAGCTTCAAGAGAAAATCAAACTCCTGCAAGTGGTTATCAACAC
GAAAGAAAACCAAGTCACACAAATCACACAAAATCTCTTCGACGCTCTTA
AAAGACTGGAACAAGAAAGGAAAAGGCAAAAGCATCGCACTGATTACATG
TGTACAATCTGCTAAATGGATTGGGTACAGGTACACAAAAAGAGGAAGAA
AAGCGAAACAAAAAGTTCGCCAAACAACAGCAGCTTCTTTACgacctcct
cctcctcctcctcctcatCGTCGACAAGAAAGGCGATGGTGACACCAAAA
GTCTCTCGCTCATTAATCCTCATCTCAAGCACATCAAATCTTTTTGATCA
ACAAACGGCACAACACGATCATATAAAATGCAGACCAGATGGCGTGCACC
ACGAGAAAGAAATAGAACAGAGCTATCAATACCACACGCCACACACTTCT
ATCAACCCTCAAGTCAACCAGCAAATTTTCATCGGTAACCTCAAACACGA
TATGGAGGACATCACTTTAGTAAGGAAGTTACAACAACTTTTCAAAGACA
GCGTGGACCTAGAAATACCAGAATTTCGGTTCACTATATTTCAGCGCGAT
TCGAAGAAACACCCACGCAAGTATGGCTATCTAAATTTGGCCACTTTGCG
CGATGAAGAAAAAGCTTATAAACTTGACGGGTTGACAAATTTAGATTTTG
TTATCGAAGGACTTGCACTTAATGTTAACAAACGGCTTTCAACGCGGAAC
CGCGTCACGAAATGGAACAAATTAACGTTTAATGGGCGCAGACGTTTGGT
CAATAGAAGTCGTTCTGATACAGATGTCCAAGCTGAcgacaaatcaaatt
taaaagctCAAAGCTCTAAACGTGAGTTAATGTACGGGCAAAATTTGCCC
AGTGAAGACCGCGTGACGGAATACAAGAAAGGAGGTGGTAACTACTTGAG
GTGTACTCTTATTCAACATGTTCGAAAATACGTGTGTGCTTTCCTCAACA
GTGAAGGTGGAAGGCTTATGATAGGTGTCGATGACACGTGCAAAGTGTTT
GGTGTGAGTTGTACACGAAAACAAGAAGATTTGGCACGCTGCCAAATTGA
CAACACAATCAAACAGTTTCAACCGCACGTTGCACCTCACATGTACATGG
TGGAATTCATCCCTGTACGCTTGGTACCTCATGATAATGTGGAATTCGAT
TGCATTGATCCTTTGCTCAAAGTGTTGAAAATATCCGTCGTCCGACAAAA
CATGATGGCCGCCACACTTTACGTCaatgataaagaaaatattttcttac
gaCGTGACGGCAGTGTTGAAGGACCTTTGAAAATTCCACAAATCATCGAA
TGGTGTCGCACACAATTCTCGCAAAATAACATCCCTCACAACGATCAAGA
CACTCCCGCACTTTTGAGCCATTCTAATAGTGTCAACTTCGAAAAGATAT
TAGATCAGTTATCAAAGAGACAGAATGAAGTACTGGCACAAATGGAAGAA
AGCTTTCATTCAGCAAGTATGGAGCTTCAAGAGAAAATCAAACTCCTGCA
AGTGGTTATCAACACGAAAGAAAACCAAGTCACACAAATCACACAAAATC
TCTTCGACGCTCTTAAAAGACTGGAACAAGAAAGGAAAAGGCAAAAGCAT
CGCACTGATTACATGTGTACAATCTGCTAAATGGATTGGGTACAGGTACA
CAAAAAGAGGAAGAAAAGCGAAACAAAAAGTTCGCCAAACAACAGCAGCT
TCTTTACgacctcctcctcctcctcctcctcatCGTCGACAAGAAAGGCG
ATGGTGACACCAAAAGTCTCTCGCTCATTAATCCTCATCTCAAGCACATC
AAATCTTTTTGATCAACAAACGGCACAACACGATCATATAAAATGCAGAC
CAGATGGCGTGCACCACGAGAAAGAAATAGAACAGAGCTATCAATACCAC
ACGCCACACACTTCTATCAACCCTCAAGTCAACCAGCAAATTTTCATCGG
TAACCTCAAACACGATATGGAGGACATCACTTTAGTAAGGAAGTTACAAC
AACTTTTCAAAGACAGCGTGGACCTAGAAATACCAGAATTTCGGTTCACT
ATATTTCAGCGCGATTCGAAGAAACACCCACGCAAGTATGGCTATCTAAA
TTTGGCCACTTTGCGCGATGAAGAAAAAGCTTATAAACTTGACGGGTTGA
CAAATTTAGATTTTGTTATCGAAGGACTTGCACTTAATGTTAACAAACGG
CTTTCAACGCGGAACCGCGTCACGAAATGGAACAAATTAACGTTTAATGG
GCGCAGACGTTTGGTCAATAGAAGTCGTTCTGATACAGATGTCCAAGCTG
AcgacaaatcaaatttaaaagctCAAAGCTCTAAACGTGAGTTAATGTAC
GGGCAAAATTTGCCCAGTGAAGACCGCGTGACGGAATACAAGAAAGGAGG
TGGTAACTACTTGAGGTGTACTCTTATTCAACATGTTCGAAAATACGTGT
GTGCTTTCCTCAACAGTGAAGGTGGAAGGCTTATGATAGGTGTCGATGAC
ACGTGCAAAGTGTTTGGTGTGAGTTGTACACGAAAACAAGAAGATTTGGC
ACGCTGCCAAATTGACAACACAATCAAACAGTTTCAACCGCACGTTGCAC
CTCACATGTACATGGTGGAATTCATCCCTGTACGCTTGGTACCTCATGAT
AATGTGGAATTCGATTGCATTGATCCTTTGCTCAAAGTGTTGAAAATATC
CGTCGTCCGACAAAACATGATGGCCGCCACACTTTACGTCaatgataaag
aaaatattttcttacgaCGTGACGGCAGTGTTGAAGGACCTTTGAAAATT
CCACAAATCATCGAATGGTGTCGCACACAATTCTCGCAAAATAACATCCC
TCACAACGATCAAGACACTCCCGCACTTTTGAGCCATTCTAATAGTGTCA
ACTTCGAAAAGATATTAGATCAGTTATCAAAGAGACAGAATGAAGTACTG
GCACAAATGGAAGAAAGCTTTCATTCAGCAAGTATGGAGCTTCAAGAGAA
AATCAAACTCCTGCAAGTGGTTATCAACACGAAAGAAAACCAAGTCACAC
AAATCACACAAAATCTCTTCGACGCTCTTAAAAGACTGGAACAAGAAAGG
AAAAGGCAAAAGCATCGCACTGATTACATGTGTACAATCTGCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018500-exon-sc0000301-1491911889:156096..156146 | TCONS_00018500-exon-sc0000301-1491911889:156096..156146 | Clytia hemisphaerica | exon |
| TCONS_00018500-exon-sc0000301-1510915933:156096..156146 | TCONS_00018500-exon-sc0000301-1510915933:156096..156146 | Clytia hemisphaerica | exon |
| TCONS_00018500-exon-sc0000301-1575043694:156096..156146 | TCONS_00018500-exon-sc0000301-1575043694:156096..156146 | Clytia hemisphaerica | exon |
| TCONS_00018500-exon-sc0000301-1491911889:159857..160699 | TCONS_00018500-exon-sc0000301-1491911889:159857..160699 | Clytia hemisphaerica | exon |
| TCONS_00018500-exon-sc0000301-1510915933:159857..160699 | TCONS_00018500-exon-sc0000301-1510915933:159857..160699 | Clytia hemisphaerica | exon |
| TCONS_00018500-exon-sc0000301-1575043694:159857..160699 | TCONS_00018500-exon-sc0000301-1575043694:159857..160699 | Clytia hemisphaerica | exon |
| TCONS_00018500-exon-sc0000301-1491911889:160812..161284 | TCONS_00018500-exon-sc0000301-1491911889:160812..161284 | Clytia hemisphaerica | exon |
| TCONS_00018500-exon-sc0000301-1510915933:160812..161284 | TCONS_00018500-exon-sc0000301-1510915933:160812..161284 | Clytia hemisphaerica | exon |
| TCONS_00018500-exon-sc0000301-1575043694:160812..161284 | TCONS_00018500-exon-sc0000301-1575043694:160812..161284 | Clytia hemisphaerica | exon |
| TCONS_00018500-exon-sc0000301-1491911889:161497..162190 | TCONS_00018500-exon-sc0000301-1491911889:161497..162190 | Clytia hemisphaerica | exon |
| TCONS_00018500-exon-sc0000301-1510915933:161497..162190 | TCONS_00018500-exon-sc0000301-1510915933:161497..162190 | Clytia hemisphaerica | exon |
| TCONS_00018500-exon-sc0000301-1575043694:161497..162190 | TCONS_00018500-exon-sc0000301-1575043694:161497..162190 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000301 | supercontig | sc0000301:156096..162190 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR007421 | Schlafen_AAA_dom |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005524 |
ATP binding |
Blast
BLAST of TCONS_00018500 vs. Swiss-Prot (Human)
Match: SLNL1 (Schlafen-like protein 1 OS=Homo sapiens GN=SLFNL1 PE=2 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 5.198e-36 Identity = 70/169 (41.42%), Postives = 100/169 (59.17%), Query Frame = 3
Query: 753 SKRELMYGQNLPSEDRVTEYKKGGGNYLRCTLIQHVRKYVCAFLNSEGGRLMIGVDDTCKVFGVSCTRKQEDLARCQIDNTIKQFQPHVAPHMYMVEFIPVRLVPHDNVEFDCIDPLLKVLKISV-VRQNMMAATLYVNDKENIFLRRDGSVEGPLKIPQIIEWCRTQF 1256
K +L G L SE R E+K+G G YL HVR+YVCAFLNSEGG L++GV+D+ V G+ C+ + ED AR +D+ ++ F+P + P Y + FIPV +V LKV++++V + LY D+ +FLRRDGS++GPL I EWCR ++
Sbjct: 208 GKDQLFQGAFLGSETRNMEFKRGSGEYLSLAFKHHVRRYVCAFLNSEGGSLLVGVEDSGLVQGIRCSHRDEDRARLLVDSILQGFKPQIFPDAYTLTFIPVISTSETSVP-------LKVIRLTVHTPKAQSQPQLYQTDQGEVFLRRDGSIQGPLSASAIQEWCRQRW 369
The following BLAST results are available for this feature:
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