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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018487 ID=TCONS_00018487|Name=TCONS_00018487|organism=Clytia hemisphaerica|type=transcript|length=887bp
cccggacaacgggttttaaaccccggacaagcatcagttgacccccagAT
AACCCAAATTACcgccggacaaggcaaattttgatgatttttcgctacca
cCGGAaaatatatcctccatcccccatgtacggacattttctggaagagc
ccaatatagGAATATCCAATTGTTTTTGAGCTACTAGACAGCCATCCCAT
TGGATTTTTTGATGGCTTATGTTACATTTACACAGTTTATATGTCTATGA
TATTTATCATCTTAAGAACAGGTGATACTTTGAATTGAACATTTCAAACA
Atcttatttgaatttttatatgtattagaaattttattttcaactgagga
tCGTCTCCACGGTGTGAAACCATTAGTATTGAAATAAAACACATTCGACA
ATAGTATATTAGTAACTCTATGAATTTATTcagatttatttatttgattt
tacgTTAGTTCTGTAATTTATCATCGAAGGATGGATGAAatgacaaatat
ttttatgttaTCGGCCCTTTTACACCGACTCATTGGCGTCATAAACggga
aaaaaagacttaaaatgtgACTATCTTGAGAAAAATACTGCACTCTTTGt
tgacaactgaaaatatttttcgaaattaaataaacgggggaTCCCAATAA
GGTCAGGTAGCAGGTAGGTTGAAAAAAAGATCGAAAATTAACAAACGGGA
GGCCGAGTGTAGTTGGCGTAAGCTCAAAAACGGGTAATGGTTGACTAAAG
GCGGAAAGGGGCGGTGTAGAGAGGGCAGTGTAGAGAGGGCGGTGTGTAAG
GGGCGGCGTGTCCGAAAgtgaaacaataaaaatgaagaattttcttTACG
GTGATTTTATTTTCTCCGAACTCTTGAAAAATACTGC Run BLAST on NCBI transcript from alignment at sc0000300:339251..340137 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018487 ID=TCONS_00018487|Name=TCONS_00018487|organism=Clytia hemisphaerica|type=transcript|length=887bp|location=Sequence derived from alignment at sc0000300:339251..340137 (Clytia hemisphaerica)
GCAGTATTTTTCAAGAGTTCGGAGAAAATAAAATCACCGTAaagaaaatt
cttcatttttattgtttcacTTTCGGACACGCCGCCCCTTACACACCGCC
CTCTCTACACTGCCCTCTCTACACCGCCCCTTTCCGCCTTTAGTCAACCA
TTACCCGTTTTTGAGCTTACGCCAACTACACTCGGCCTCCCGTTTGTTAA
TTTTCGATCTTTTTTTCAACCTACCTGCTACCTGACCTTATTGGGAtccc
ccgtttatttaatttcgaaaaatattttcagttgtcaaCAAAGAGTGCAG
TATTTTTCTCAAGATAGTcacattttaagtctttttttcccGTTTATGAC
GCCAATGAGTCGGTGTAAAAGGGCCGAtaacataaaaatatttgtcatTT
CATCCATCCTTCGATGATAAATTACAGAACTAAcgtaaaatcaaataaat
aaatctgAATAAATTCATAGAGTTACTAATATACTATTGTCGAATGTGTT
TTATTTCAATACTAATGGTTTCACACCGTGGAGACGatcctcagttgaaa
ataaaatttctaatacatataaaaattcaaataagaTTGTTTGAAATGTT
CAATTCAAAGTATCACCTGTTCTTAAGATGATAAATATCATAGACATATA
AACTGTGTAAATGTAACATAAGCCATCAAAAAATCCAATGGGATGGCTGT
CTAGTAGCTCAAAAACAATTGGATATTCctatattgggctcttccagaaa
atgtccgtacatgggggatggaggatatatttTCCGgtggtagcgaaaaa
tcatcaaaatttgccttgtccggcgGTAATTTGGGTTATctgggggtcaa
ctgatgcttgtccggggtttaaaacccgttgtccggg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018487-exon-sc0000300-1491911889:339251..340137 | TCONS_00018487-exon-sc0000300-1491911889:339251..340137 | Clytia hemisphaerica | exon |
| TCONS_00018487-exon-sc0000300-1510915933:339251..340137 | TCONS_00018487-exon-sc0000300-1510915933:339251..340137 | Clytia hemisphaerica | exon |
| TCONS_00018487-exon-sc0000300-1575043694:339251..340137 | TCONS_00018487-exon-sc0000300-1575043694:339251..340137 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000300 | supercontig | sc0000300:339251..340137 . |
Blast
The following BLAST results are available for this feature:
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