TCONS_00018393 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018393
Unique NameTCONS_00018393
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1687

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018393 ID=TCONS_00018393|Name=TCONS_00018393|organism=Clytia hemisphaerica|type=transcript|length=1687bp
ctcaaaaagaaaagatatgCACGAAATTTACACAGTGCTAAACTAATTGA
AAGCTATGACCATGTTGTATCAGAGCACAAGCTGATTGGAAAAACCATAg
gccaagtttttaatgaaactgTGGAAAAGTTTCCTGACCATGAAGCTGTT
GTGTTTCATCGAGACAAGAAGAGGATGACATTTGCACAGTTGGATGAAAA
GgtGAATACATTAGCTGCAAGCATTATTGGACTTGGTTTACAAAAAGGAG
ATCGTGTTGGTATTTGGGGACAGAATCATTTGGAATGGATCATCACTTTC
TTAGCATCTGGCAAAGCTGGAACCATTCTTGTCAACGTCAATCCATCTTA
CCAATCGAAGGAGCTACATTATGCATTGAATAAAGTTGGGATGAAAGCAC
TGTTCATGACACCAGAattcaaaacatcaaattaTTATGATATTCTTCAA
AATGTGACACCTGAAATTCTAGATTCACATCCTGGTCAACTCAAGTCAAA
AAAtgTTCCAACGCTAGAATCAGTGATATTAACAGAAGGACCTGCCTTAG
AtGGAGCTTTTTCATTTGAAGATGCTTTAGCAATtggaggaaaagaagaa
aaaataaaagtggAACAACTTCAGAAGGGCATTCGGTTTGATGATCCTGT
CAATATTCAATTCACATCGGGTACAACAGGGAATCCAAAAGGTGCCACCC
TCACTCATCACAATTTGGTCAATAATGCTGCTGTTATGAGTCATATTACT
GAAATCACTGAGGAAGATCGTGTATGCACTCCACAGCCTTTGTATCACTG
CTTTGGAACAGTTATCGGCTGTTTAGCAAGTCTCATAAACGGTGCAACGC
AAGTCTATCCTACGCGTGGTATCGATCCTGCAGCTACTTTAGAAGCTATT
GAAAATGAAAGATGTACGGTGATATACGGTATACCGACCATGTTTTTGGA
CATGTTGCACCATCCAACATTTAAACGTGAGAATATGAAAACGTTGCGAA
CAGGATGCTTGGGTGGACAACCTTGTCCTCCTCAATTGATGCGTCGAATC
ATCGAAGATATGGATTGTCCAGAGTTCACTatagGGTATGGTCTTACAGA
AACAAGTCCAATCGTTACATTTGCTGATCCCAATGTTGAAATCGAAAGAC
GAATGACCACTATCGGAAAAACTTTGCCGCACATGGAAaCCAAGATAATT
GACGAGGAAGGCCACATTGTTCCTGTTAACACTTCAGGAGAATTGTGCTT
CAGAGGTCATTGTGTTTTCCAAGGTTACtgggatgacgtcatcaaaacta
aagaAGCCATTGACGAAAATGGTTGGTTTcattcaggagatttgggtcaA
ATTGATGAAAATGGATATTGTAAAGTGGTTGGACGTTTAAAAGATATGAT
TATTCGGGGTGGCGAAAATATTTATCCAACAGAAGTGGAAAACTTCCTTC
ATAATCATCCTGATATTGAAGATGTTCAAATTGTTGGAATACCCGATGAA
CGTTTCGGTGAAGAATGCTGTGCTTGGATTAAGTAAGCTCCAATTacctc
tattcatgatatgcaccattgcaatgtcttccgttccacccaatagctga
ttggttgaaagtgatgtattgaccgattttacgtcacttccaaccaatga
gctattggttctgtgacgtaatgtcagaagacattgc
Run BLAST on NCBI

transcript from alignment at sc0000297:317653..325427-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018393 ID=TCONS_00018393|Name=TCONS_00018393|organism=Clytia hemisphaerica|type=transcript|length=7775bp|location=Sequence derived from alignment at sc0000297:317653..325427- (Clytia hemisphaerica)
CTCAAAAAGAAAAGATATGCACGAAATTTACACAGGTATTTTAAAACATT
ATTTCATCCGTCGTTAAATTCATGAATTTTCTTCAGAGGGACTAAAATTA
TATTATATCAAATCTTACAGTATTTTATGACTTCAACACGGAAAGTGTTT
TCCAAATTCATCCCTTTCACAGTGTTGTTGAAACCTCTGTTGTTTGATGA
ATATGTTTATATTTTTGTGCAAACAAAAGATCAAGGGGACAACTTAAGTC
GATGATATGTATCTTAAGACAAAAGATTGGGATACTTAGGGTCATTCCAC
GAGTAATAAGTCCCCTTATATGAGCTACGGACTTAACACGAATTTTTTTT
ATTGTACTCAGGAAAGATAGATCTAATATACGTTGCCACACTTTTCTTTC
TTTTTGCCTTAAACTAAAGTTAAAAGCCTTTAAACTAAAAATTGGCTATT
GTGTTCATGTTTTTTGTCGTTTTTTGACGTTTTATTGAATAATTTGAAAA
CTAAGCGTTTGGAAAAAAATTTTCGTCTATTTTTCTGGATCATGATCATA
TAAAAAGTTTTATTAAATTGTAAAACGTAAGGGGACTTATCACTCTTTGA
AGATGACGAGGTCATGCTTCCTTTGTTATCTTTTATTTCTTCGTCAAATT
GACGAAATTGATTATTATCAGCATCAATCGATAGAGAATTTAATAAGCTT
TCCAAAAATATATACTTTTACTATTGAAATCTATCTGTATCGAAAGCTAT
CATCAAAAGAGTCAGGTGTGGTGTAAAAGGTTTCCACGTACCTTAAAAAT
TTAAAACATTCATCAAAAAAATATGGAAAAGAGATTTTCTTGCCGTTTCA
CATAGTGTTACTGATGACTGCCATGAATTTTAAGAAAATCAGATTTATAA
AAGCTCTACCGATGGGACTGGGAACTTAATTGAATAATAATTCAGCACTG
CAACTGAAAACTAATCTCTGTATTTCCTTATAGTGCTAAACTAATTGAAA
GCTATGACCATGTTGTATCAGAGCACAAGCTGATTGGAAAAACCATAGGC
CAAGTTTTTAATGAAACTGTGGAAAAGTTTCCTGACCATGAAGCTGTTGT
GTTTCATCGAGACAAGAAGAGGATGACATTTGCACAGTTGGATGAAAAGG
TTCTTAGTAACACTTTGTAAGAAATTTAATCTATTTGTAGGTCCGTCCAT
CTAATTATCCATTTGTGACGTTAAACAATGATCCGACTGTGTACATTATA
TTTTCTTCATTAATGCTGCCTTTTTCGCTTAATTGGTCATTAAGCCAAGA
GAGGTCTACCCCTCTCTTGGAGAGCAAAAGGTTTAATGACCAATTTTCGA
CGTTAAATCTGGAATGCTGATATGAAAGCGATCAAAATCTTTTGTTAAGC
ACGAATCTTTATTGTATATTTTTTACAACCCTTAGAAATTTATAAAAAGG
ACCGTTGATGAGAACCACTTATCTATCTAGCGTAGTGAAAAAGCACCCTT
TATGTCCCTTTAACTATCCATAAATAAATTGGTTGCCATAAAAGTAGCAG
AATGTGCAGTGGGATTCTTTTGTAAAAAATTGGTCGTATGGGAAAAGTGT
TTTCTTTCCCGGTAGAGTTGAAGAGCAAACTTTCATCTGTATTGATTTGA
TACAAAAGACGAGGAATCTTGTCACAGAAAATGTTCATTAGAAGGCTGTA
ATTCTAAATCCCTTGATATGCGAGTTGATGATTTTTAATAAAATTTTCTT
CAAATTCAAAGGGTTGTAAACGCTTTGACAACTGTTTTGGGAGTTAGTAA
TACTTTCCTATCAATTTTTTTTGTTTCAGCTAATCGATTTTCGCCAGACA
GTCTCAGTGAAAAACCACCCAAAGTAGTGACGAAATTTGTAAACAAACCG
TTTGCAGCGGGATACAAAATCAAAACAAATGTCACATGCCAAAATAAAAA
AATGATTGTTTTAATTTTTTTAATGACACGTGGTTCGCGCAATGTTTACA
TTTTACTACTTTTATATCCCTTTAAAAATTCCCAGAAAATTATACTAAAA
CTGATCAAAAGTTTAGATTACCAAATCCGGGGGGGGACTCACATGATCCG
ACCCACTGTAAGGGTGTCTTTGGGGGCTACTGGATCGCAAATCTGATAGT
AAAAATCTGTTGTATCTTTACAGTTTTGATTTGCACTTATTTTAATTTGT
TTTGCACATTGTGTCAACATCTCTGGCTCATTTCAGGTGGCTCCAGCAAA
ACTTATCTTATGCAATCAAATTATACACTGTAAGGGTCAGAAATGTTCGG
TAAGATGCACTGTAAGGGTACCTTTTTCACTACTCAAGGGCTGCACTGTA
AGGGTCTGATTTTGAAAGCCATTGTTTTGACTTCACATGCCGTCGTCTAG
AAATCTTGACATCGGTTTTAATTTTTTTTCATTCAGGTGAATACATTAGC
TGCAAGCATTATTGGACTTGGTTTACAAAAAGGAGATCGTGTTGGTATTT
GGGGACAGAATCATTTGGAATGGATCATCACTTTCTTAGCATCTGGCAAA
GCTGGAACCATTCTTGTGAGGAAACTGTTTAATAAGAATAAACTTACTAT
TAATGGAACAATGTGTTCTCATTTTGATCAAAGATGTATTTGTAGAACAT
ATTTGATTATTTTTGCCTCATATATTCTCAGTTTTTATTAGGTTTGGCCT
TTATCGATTATATCAACCTTCCATCTTTATTCTCTCATTAGGTCAACGTC
AATCCATCTTACCAATCGAAGGAGCTACATTATGCATTGAATAAAGTACA
TAACAATTTTTCTGCGATAACTGTATTAGAGAGTCGATGTTTTACATGGA
TAGCCCGGTAATCTATGACTTTTAGACAGTCTTTCGGTTGTTTTCATGGG
GTTCACGGCTAGTCGGCTGGGCTATCTATGAACTGAACGGAACATTGGAA
GGAGCAGGGATTCGAACTGCGATCCCCTGGGNCTATCTATGAACTGAACG
GAGGAAGGAGCAGGGATTCGAACCGCGAACCCCTGGTTAAAGACGCTGAC
GTCTTTGACCACTTGGCCATCGCTCCTCTGCGAATCCAGAGATTGATTTC
ATCGTTTTGAAATTGAAAGAAATACATTAAGTCAAGTTTCATGCCTTACA
GCAATCAACAGACGTGCAATCAACATCGAAATTTTGAAATGAATTTATAA
CAGTTTTTTTGTTTCGGTCTTGCTCTATCTACCAATATTTTGGCAGCAAA
TTTGGTCCTGCCATTTTGTTTAAGGCAAGTACCAGAAGTATTTAAATCTT
TACAGTTAAGCTTATAGAGCTATTAGTTCGAGAGCCGTCGGACTTTTTAT
TAGGTCATAAGCCTCAGAATTTTAACCATGGCGTCATCAAATAATGACAT
AAAGTTCCCACAAAGTGTGATTGGTTGTCATGGACACACTGTCCAAATTT
CATCGCTAAATATTGAGTAGATAAAACGCTATACAAAGTGTCGTCCAAAA
GGGGGGTCATCTGACCAGGTCAAGGAACCGGTTTTTTTGGTTAGATTTTC
GATTTTCACTGTCCCTAAGGGTTGTACTAATTACCTGCAAAATTTCAGCC
ATGAGGCTCATGACCTAAATTTAGGCCCCTTTTTGGTCTCATTTTTGGGC
ATCTGACCAGGTCAAGAAACCGGATTTTTTGGTTAGATTTTCGATTTTCA
TTGTCCTTGAGGGTTGTACTAATGACCTGTAAAATTTCAACCATGAGGTT
CGTGACCTAAATTTAAGCCCTTTTTTGACCTCTTTTTTTGGGCTCGTGGA
GATCAAAGAGACAGCTAGTGTTCGATCTGACAAAACTTTTTTGAGACTTT
TCGATGCGGCGAACACGTTGAGGATGGTTAAAATTCTGAGGCTTATGACC
TAATAAAAAGGCCGACAGCTCTCGAACTATATCAGTGTAGAGCATGTTAA
TGATATTCTCTGTTTTTAATCAGGTTGGGATGAAAGCACTGTTCATGACA
CCAGAATTCAAAACATCAAATTATTATGATATTCTTCAAAATGTGACACC
TGAAATTCTAGATTCACATCCTGGTCAACTCAAGTCAAAAAAGTAAATAC
ATATTTGCATATTGCTGTTAAACATGAGAAAGGTTAAATTATCTTTTGAA
ACAAAAAATCTATTGTTAAAGAAAACTACTACTGCTTCACACTATTCCAC
CCCTTTGCCTCCACCCCTTTACCTCGCGAAAAAAATGTTATTCAAGGCAT
TAAAAATGATATTCTTTATAAAATTTTCTCTTTTTAGTGTTCCAACGCTA
GAATCAGTGATATTAACAGAAGGACCTGCCTTAGAGTTTGTATAATCTGT
TTTCATGTCTAATCCAATCTGCAGGCTTAAGAGATTTGGTGAAATTCAAA
AGGGATCCTGACTCAAAAGTTGATAAAACGCGTTTCTAAGCCTTGATGAT
TCATTAACGTAGCATATGCTATTTTTGTAATAAGCATAAAATTATTTTGT
TTCCTGTTCTGATATAATGTGATTCTCCTTGCGGTATGTTTCAACAACAG
ACGAATGAGATCTCAGCACAGACTCAGACTGTATTAGTGCAATGCCCCTC
CAGAGCGATTCTCACTCCAGTCCTCAGTGAAATGGCTCACCTATAAATAT
CACTATTCCTATTTGGCACATGCGCACAAAAAGAAAACATCTCTCAGTTA
GAGAGAATTAATTTTAATGAAATTTTGTTTCTATTTAACAATGATAAAAT
AATGGTTTTCTTTCAATTTCAGTGGAGCTTTTTCATTTGAAGATGCTTTA
GCAATTGGAGGAAAAGAAGAAAAAATAAAAGTGGAACAACTTCAGAAGGG
CATTCGGTTTGATGATCCTGTCAATATTCAATTCACATCGGTATGGGTCA
TAATTCTATACCAAAAGTCTTTATTGAAAGTCTATACCCATCGTTTACGG
AGTTGAATTGTGGGAAGGGTTGATTATAAAATTTTTCGATCTCAGGCGAA
CTTCCTACATTCCTGATCATCATATTTTTTAAGTATTACCACCGCTTTTT
CTGTATAAAATATTGCTTTTCTACACATGGACAGTAATGGCATGCTATAA
AGAAGAAGTATGTACCCTACTACTAAGGTTTTGTCAAATCTTTGGTGAAA
ATGAACTCTTTCTCTTTTAGGGTACAACAGGGAATCCAAAAGGTGCCACC
CTCACTCATCACAATTTGGTCAATAATGCTGCTGTTATGAGTCATATTAC
TGAAATCACTGAGGTACTATACGTCTGGTTGCACTGACAAATTTTCCCAG
TTTGATGTTGTAAACCGTCTATCGTTTTTTGCAGTAGACTCGAATTCTAT
CTCGAATCTCTTTTCACTTTCGTTTTACGCGTTTAGCGAAAATTAGTTAC
CGTGAAAATTAGTTCCCATAATGGGTGGCATTGAATAACAAGACTTCAGA
AAAAGGAATTCAAAGTCGATGTCTGGTTAAACTGAATTGAACTGTTCTGA
AAAAAGGCACTCTGAGAAAGAGGCTACAAAATACATTTCCAGGACTTTAA
GGATAAAAAGTTTATTCCGTAAAATTTTATTCCGTTCCGTAACGTCGTTT
TCCAAAAATCTTGATTTAATTTTTTCTTCCACAGGAAGATCGTGTATGCA
CTCCACAGCCTTTGTATCACTGCTTTGGAACAGTTATCGGCTGGTAAAAG
CTATTTCTTCAGATTTCTTTACTATTTATCATAATACTCACAAAACACTT
AATTGCTCGAATATTCTGTTATATGTATTACTGATTCCCGTATGATTTCG
AATTATCGAAACTCAGGTATCTATCGGTTTGCGTCGATTTAGCATTAAAG
AACCAAGTTTTCAGTCAATGATTCTTCTCTTCCTTTGAATGAAGTTTAGC
AAGTCTCATAAACGGTGCAACGCAAGTCTATCCTACGCGTGGTATCGATC
CTGCAGCTACTTTAGAAGCTATTGAAAATGAAAGGTATCCTGTTCGTCTA
TATTGTCTTTTTAGTTGTATTTATATGTCTTTTTACATGATCTAAGATCA
TGTTCAGTTCATTATTTTCAATGTAAGAAACACTCTCCCTCATAATCTTT
TAACCTCGTTTGTAACTCACACTACTTTTTATTTGAAACTCATTAGCTTT
AAAATCCCTATCTTTAGACCCGAATACTAATGAAAATCTTTTCTAAGATT
CAATTTTGTAATTAAGAAATTTCATTAAAAGCAATAAAGTCGTTGTTATT
GTGCTTCATCTAATAATTACAGAAGTCCAGTTACAGATCTAGTTACAGAA
CTTCTCCCTTGAAATAGACCCAAGAGGGACTAAGCAAGTTATCCTCAATA
CGGCGACTGATCTTAGTGGGCACTAAAACTTTTTACTTTCATGTTAACTT
TTAGATGTACGGTGATATACGGTATACCGACCATGTTTTTGGACATGTTG
CACCATCCAACATTTAAACGTGAGAATATGAAAACGTTGCGAACAGGATG
CTTGGGTGGACAACCTTGTCCTCCTCAATTGATGCGTCGAATCATCGAAG
ATATGGATTGTCCAGAGTTCACTGTATGTAAACATCCCTGTCTCACTGAC
CCATCGAATGTTTATTTTTAACGATGATCTCATCAGGGAGAATATTTTTA
AGGAATCCTACTGGCACTGACAAAGTGTCCTTGTGTCTGCCCACCGGGTG
TGCCAAAAATAAGTTACCCTCTTTGATTTGATATTGTAGGCAGTAGAAGA
AATATTTTTGCAAAAATTGTTGCGGAATCGTTAAAAGTTTTCCTCTGATT
GATTCCAAAAAACTTTTGAAAAACCTTTCTACTACTGCCTGCAATATCAA
ATCAAAGAAGTTAACATATTTCTGGCGCACCCTATATTTAGAGTCTTTGG
TTCTCTTGTTTTCCCAAGATTCCCAATGAATCATTATTTTTTTCAGATAG
GGTATGGTCTTACAGAAACAAGTCCAATCGTTACATTTGCTGATCCCAAT
GTTGAAATCGAAAGACGAATGACCACTATCGGAAAAACTTTGCCGCACAT
GGAAGTGAGTTTTCTGTCGTGATTAAAACTTTCATTCTAAAATTGACACA
AACACATTGTAAGTTGTTTTTTATGCTCGTTGGATGACCCGTTGGTAAAC
CCTAGGACTGTTTCAGTCATCCTTTCTTCTAGATCTTTATATCCCAATAT
CCCAATCCACCATTTTGCCTAGCTAGTATAAAATGAAAGTATTTATAGCA
ATATATAGCATTTTCATTTTTATTAGACCAAGATAATTGACGAGGAAGGC
CACATTGTTCCTGTTAACACTTCAGGAGAATTGTGCTTCAGAGGTCATTG
TGTTTTCCAAGGTTACTGGGATGACGTCATCAAAACTAAAGAAGCCATTG
ACGAAAATGGTTGGTTTCATTCAGGAGATTTGGGTCAAATTGATGAAAAT
GGATATTGTAAAGTGGTTGGACGTTTAAAAGATATGATTATTCGGGGTGG
CGAAAATATTTATCCAACAGAAGTGGAAAACTTCCTTCATAATCATCCTG
ATATTGAAGATGTTCAAATTGTTGGAATACCCGATGAACGTTTCGGTGAA
GAATGCTGTGCTTGGATTAAGTAAGCTCCAATTACCTCTATTCATGATAT
GCACCATTGCAATGTCTTCCGTTCCACCCAATAGCTGATTGGTTGAAAGT
GATGTATTGACCGATTTTACGTCACTTCCAACCAATGAGCTATTGGTTCT
GTGACGTAATGTCAGAAGACATTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010316XLOC_010316Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018393-exon-sc0000297-1575043694:325393..325427TCONS_00018393-exon-sc0000297-1575043694:325393..325427Clytia hemisphaericaexon
TCONS_00018393-exon-sc0000297-1575043694:324279..324444TCONS_00018393-exon-sc0000297-1575043694:324279..324444Clytia hemisphaericaexon
TCONS_00018393-exon-sc0000297-1575043694:322863..322991TCONS_00018393-exon-sc0000297-1575043694:322863..322991Clytia hemisphaericaexon
TCONS_00018393-exon-sc0000297-1575043694:322633..322686TCONS_00018393-exon-sc0000297-1575043694:322633..322686Clytia hemisphaericaexon
TCONS_00018393-exon-sc0000297-1575043694:321336..321454TCONS_00018393-exon-sc0000297-1575043694:321336..321454Clytia hemisphaericaexon
TCONS_00018393-exon-sc0000297-1575043694:321093..321140TCONS_00018393-exon-sc0000297-1575043694:321093..321140Clytia hemisphaericaexon
TCONS_00018393-exon-sc0000297-1575043694:320538..320655TCONS_00018393-exon-sc0000297-1575043694:320538..320655Clytia hemisphaericaexon
TCONS_00018393-exon-sc0000297-1575043694:320165..320257TCONS_00018393-exon-sc0000297-1575043694:320165..320257Clytia hemisphaericaexon
TCONS_00018393-exon-sc0000297-1575043694:319735..319793TCONS_00018393-exon-sc0000297-1575043694:319735..319793Clytia hemisphaericaexon
TCONS_00018393-exon-sc0000297-1575043694:319444..319533TCONS_00018393-exon-sc0000297-1575043694:319444..319533Clytia hemisphaericaexon
TCONS_00018393-exon-sc0000297-1575043694:318855..319023TCONS_00018393-exon-sc0000297-1575043694:318855..319023Clytia hemisphaericaexon
TCONS_00018393-exon-sc0000297-1575043694:318374..318481TCONS_00018393-exon-sc0000297-1575043694:318374..318481Clytia hemisphaericaexon
TCONS_00018393-exon-sc0000297-1575043694:317653..318151TCONS_00018393-exon-sc0000297-1575043694:317653..318151Clytia hemisphaericaexon
TCONS_00018393-exon-sc0000297-1510915933:325393..325427TCONS_00018393-exon-sc0000297-1510915933:325393..325427Clytia hemisphaericaexon
TCONS_00018393-exon-sc0000297-1510915933:324279..324444TCONS_00018393-exon-sc0000297-1510915933:324279..324444Clytia hemisphaericaexon
TCONS_00018393-exon-sc0000297-1510915933:322863..322991TCONS_00018393-exon-sc0000297-1510915933:322863..322991Clytia hemisphaericaexon
TCONS_00018393-exon-sc0000297-1510915933:322633..322686TCONS_00018393-exon-sc0000297-1510915933:322633..322686Clytia hemisphaericaexon
TCONS_00018393-exon-sc0000297-1510915933:321336..321454TCONS_00018393-exon-sc0000297-1510915933:321336..321454Clytia hemisphaericaexon
TCONS_00018393-exon-sc0000297-1510915933:321093..321140TCONS_00018393-exon-sc0000297-1510915933:321093..321140Clytia hemisphaericaexon
TCONS_00018393-exon-sc0000297-1510915933:320538..320655TCONS_00018393-exon-sc0000297-1510915933:320538..320655Clytia hemisphaericaexon
TCONS_00018393-exon-sc0000297-1510915933:320165..320257TCONS_00018393-exon-sc0000297-1510915933:320165..320257Clytia hemisphaericaexon
TCONS_00018393-exon-sc0000297-1510915933:319735..319793TCONS_00018393-exon-sc0000297-1510915933:319735..319793Clytia hemisphaericaexon
TCONS_00018393-exon-sc0000297-1510915933:319444..319533TCONS_00018393-exon-sc0000297-1510915933:319444..319533Clytia hemisphaericaexon
TCONS_00018393-exon-sc0000297-1510915933:318855..319023TCONS_00018393-exon-sc0000297-1510915933:318855..319023Clytia hemisphaericaexon
TCONS_00018393-exon-sc0000297-1510915933:318374..318481TCONS_00018393-exon-sc0000297-1510915933:318374..318481Clytia hemisphaericaexon
TCONS_00018393-exon-sc0000297-1510915933:317653..318151TCONS_00018393-exon-sc0000297-1510915933:317653..318151Clytia hemisphaericaexon
TCONS_00018393-exon-sc0000297-1491911889:325393..325427TCONS_00018393-exon-sc0000297-1491911889:325393..325427Clytia hemisphaericaexon
TCONS_00018393-exon-sc0000297-1491911889:324279..324444TCONS_00018393-exon-sc0000297-1491911889:324279..324444Clytia hemisphaericaexon
TCONS_00018393-exon-sc0000297-1491911889:322863..322991TCONS_00018393-exon-sc0000297-1491911889:322863..322991Clytia hemisphaericaexon
TCONS_00018393-exon-sc0000297-1491911889:322633..322686TCONS_00018393-exon-sc0000297-1491911889:322633..322686Clytia hemisphaericaexon
TCONS_00018393-exon-sc0000297-1491911889:321336..321454TCONS_00018393-exon-sc0000297-1491911889:321336..321454Clytia hemisphaericaexon
TCONS_00018393-exon-sc0000297-1491911889:321093..321140TCONS_00018393-exon-sc0000297-1491911889:321093..321140Clytia hemisphaericaexon
TCONS_00018393-exon-sc0000297-1491911889:320538..320655TCONS_00018393-exon-sc0000297-1491911889:320538..320655Clytia hemisphaericaexon
TCONS_00018393-exon-sc0000297-1491911889:320165..320257TCONS_00018393-exon-sc0000297-1491911889:320165..320257Clytia hemisphaericaexon
TCONS_00018393-exon-sc0000297-1491911889:319735..319793TCONS_00018393-exon-sc0000297-1491911889:319735..319793Clytia hemisphaericaexon
TCONS_00018393-exon-sc0000297-1491911889:319444..319533TCONS_00018393-exon-sc0000297-1491911889:319444..319533Clytia hemisphaericaexon
TCONS_00018393-exon-sc0000297-1491911889:318855..319023TCONS_00018393-exon-sc0000297-1491911889:318855..319023Clytia hemisphaericaexon
TCONS_00018393-exon-sc0000297-1491911889:318374..318481TCONS_00018393-exon-sc0000297-1491911889:318374..318481Clytia hemisphaericaexon
TCONS_00018393-exon-sc0000297-1491911889:317653..318151TCONS_00018393-exon-sc0000297-1491911889:317653..318151Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000297supercontigsc0000297:317653..325427 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.201493	0	0	0	0	0	0	0	0	0	0.466041	0.0961866	0.546407	0.902444	3.73477	0.550039	1.25557	0	0	1.87526	1.93136	0	0	0	0	0	0	0	0
Blast
[Close]
BLAST of TCONS_00018393 vs. Swiss-Prot (Human)
Match: ACSF2 (Acyl-CoA synthetase family member 2, mitochondrial OS=Homo sapiens GN=ACSF2 PE=1 SV=2)

HSP 1 Score: 468.774 bits (1205), Expect = 9.151e-158
Identity = 223/503 (44.33%), Postives = 332/503 (66.00%), Query Frame = 1 
Query:   52 SYDHVVSEHKLIGKTIGQVFNETVEKFPDHEAVVFHRDKKRMTFAQLDEKVNTLAASIIGLGLQKGDRVGIWGQNHLEWIITFLASGKAGTILVNVNPSYQSKELHYALNKVGMKALFMTPEFKTSNYYDILQNVTPEILDSHPGQLKSKNVPTLESVILTEGPALDGAFSFEDALAIGGKEEKIKVEQLQKGIRF---DDPVNIQFTSGTTGNPKGATLTHHNLVNNAAVMSHITEITEED----RVCTPQPLYHCFGTVIGCLASLINGATQVYPTRGIDPAATLEAIENERCTVIYGIPTMFLDMLHHPTFKRENMKTLRTGCLGGQPCPPQLMRRIIEDMDCPEFTIGYGLTETSPIVTFAD-PNVEIERRMTTIGKTLPHMETKIID-EEGHIVPVNTSGELCFRGHCVFQGYWDDVIKTKEAIDENGWFHSGDLGQIDENGYCKVVGRLKDMIIRGGENIYPTEVENFLHNHPDIEDVQIVGIPDERFGEECCAWIK 1533
            SY    ++  L  KT+GQ    T ++ P+ EA+V   +  R+TFAQL E+V+  A+ ++ +GL KGDR+G+WG N   W++  LA+ +AG ILV+VNP+YQ+ EL Y L KVG KAL    +FKT  YY++L+ + PE+ ++ PG LKS+ +P L +VI  + P L G    ++ +A G   + +  +QLQ   +F    DP+NIQFTSGTTG+PKGATL+H+N+VNN+ ++    ++ E+     R+  P PLYHC G+V G +  L+ GAT +  +   +    LEAI  ER T +YG PTMF+D+L+ P F   ++ T+  G + G P PP+L+R II  ++  +  + YG TE SP VTFA  P   +E++  ++G+ +PH E +I++ E G +  +NT GELC RG+CV  GYW +  KT+EA+D++ W+ +GD+  ++E G+CK+VGR KDMIIRGGENIYP E+E+F H HP +++VQ+VG+ D+R GEE CA I+
Sbjct:   59 SYVQGCTKKHLNSKTVGQCLETTAQRVPEREALVVLHEDVRLTFAQLKEEVDKAASGLLSIGLCKGDRLGMWGPNSYAWVLMQLATAQAGIILVSVNPAYQAMELEYVLKKVGCKALVFPKQFKTQQYYNVLKQICPEVENAQPGALKSQRLPDLTTVISVDAP-LPGTLLLDEVVAAGSTRQHL--DQLQYNQQFLSCHDPINIQFTSGTTGSPKGATLSHYNIVNNSNILGERLKLHEKTPEQLRMILPNPLYHCLGSVAGTMMCLMYGATLILASPIFNGKKALEAISRERGTFLYGTPTMFVDILNQPDFSSYDISTMCGGVIAGSPAPPELIRAIINKINMKDLVVAYGTTENSP-VTFAHFPEDTVEQKAESVGRIMPHTEARIMNMEAGTLAKLNTPGELCIRGYCVMLGYWGEPQKTEEAVDQDKWYWTGDVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQVVGVKDDRMGEEICACIR 557
The following BLAST results are available for this feature:
BLAST of TCONS_00018393 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ACSF29.151e-15844.33Acyl-CoA synthetase family member 2, mitochondrial... [more]
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