|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018321 ID=TCONS_00018321|Name=TCONS_00018321|organism=Clytia hemisphaerica|type=transcript|length=1256bp
ATATTACACAGATAAAGTACTAAAAGTCAGCTGGGAAGAGAGATACAATA
AACTCATTCgaatctctctataattcgaacttttttccAGCCCCGTaaag
gagaaaccctcttaaaatactttctataattcgaatctctcttgAATTCG
AACAAACTAGATTCCCAGTTCGAATTCGAGTTCGAATTGGCGAGAGCCAT
CTGTGAtacaaatatcttttttcgaGCGAAGGTCGGCAAAGGCCGAAGCA
ACATGAAACACATTTAAGATGGTTGTTACTGTTTCCTTTTTACTTTCAAC
GCAAAGTTGAAAGTTGGTTCAGTGATCATGTCAATCAACTTGGAAAGGcg
atttgaaaagattttatcAGAGGTTTATGAAACACAACAATCGACTTAGT
AACTAGATCATCTCAATCAGAAAAACCAAGAAAATGTTTATCATTTTTCA
AAGGCTACCGGTAGATATAGCTTTACGATTCCGCACTTAGATTAACCAAG
CATTTTTTACGTCAATCATCTGTTTAGAAAGCTTATAAGTCCCAAAGAAT
AATTCTCTCCATTGCAGATGAGTCATCATAACTCGAATCTTCAAAACTAT
CATGTTTCAAGCTTGAACGGTTTTAGACTTTAGACTTTTTCGACCAATTC
TTATGTCTCCCACACTCAATAATACAGATAATGGATGGCCAAATAGCACA
GGCTACACGCATGAAACTATACTAAATTTCTATCGTTCGAACAATCTATG
TACTGTCATTTTACCCATTTTAACAAATTGGTTCGGGTTTCGCGATATAA
CTATCAAAACTAGCAACAATTCAAAATTATCTTCACATGTTGAGGAATAA
CTTCATCTGTTTCNGGTTCGGGTTTCACGATATAACTATCAAAACTAGCA
ACAATTCAAAATTATCTTCACATGTTGAGGAATAACTTCATCTGTTTCGC
TTCAAACTTCTCCGAGACTCCAAGAGTGACCTGAATAGATCCTCCTCACA
AAAGTTCAGTGAGCTCACTCAGAATTCAAAGTCtgcaaaagattttattt
ttccaaAGAAATAAAACATTATACTCTCAGCACCAACCATCAAGAACTTG
GATGTTTTGAAACCAAAAACCTTAACCCTTTCTACGtcatttagaaaaat
aaaagcaaaagtctccaaaaaaaattcttgttgtGGTTTCAGTTTAGGAG
TACGCAATTAAATAAAGGAGTCCTATTTAAAAACTGAGGTGAGACTTGTC
ACGAAT Run BLAST on NCBI transcript from alignment at sc0000295:227936..229191 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018321 ID=TCONS_00018321|Name=TCONS_00018321|organism=Clytia hemisphaerica|type=transcript|length=1256bp|location=Sequence derived from alignment at sc0000295:227936..229191 (Clytia hemisphaerica)
ATTCGTGACAAGTCTCACCTCAGTTTTTAAATAGGACTCCTTTATTTAAT
TGCGTACTCCTAAACTGAAACCacaacaagaattttttttggagactttt
gcttttatttttctaaatgaCGTAGAAAGGGTTAAGGTTTTTGGTTTCAA
AACATCCAAGTTCTTGATGGTTGGTGCTGAGAGTATAATGTTTTATTTCT
ttggaaaaataaaatcttttgcaGACTTTGAATTCTGAGTGAGCTCACTG
AACTTTTGTGAGGAGGATCTATTCAGGTCACTCTTGGAGTCTCGGAGAAG
TTTGAAGCGAAACAGATGAAGTTATTCCTCAACATGTGAAGATAATTTTG
AATTGTTGCTAGTTTTGATAGTTATATCGTGAAACCCGAACCNGAAACAG
ATGAAGTTATTCCTCAACATGTGAAGATAATTTTGAATTGTTGCTAGTTT
TGATAGTTATATCGCGAAACCCGAACCAATTTGTTAAAATGGGTAAAATG
ACAGTACATAGATTGTTCGAACGATAGAAATTTAGTATAGTTTCATGCGT
GTAGCCTGTGCTATTTGGCCATCCATTATCTGTATTATTGAGTGTGGGAG
ACATAAGAATTGGTCGAAAAAGTCTAAAGTCTAAAACCGTTCAAGCTTGA
AACATGATAGTTTTGAAGATTCGAGTTATGATGACTCATCTGCAATGGAG
AGAATTATTCTTTGGGACTTATAAGCTTTCTAAACAGATGATTGACGTAA
AAAATGCTTGGTTAATCTAAGTGCGGAATCGTAAAGCTATATCTACCGGT
AGCCTTTGAAAAATGATAAACATTTTCTTGGTTTTTCTGATTGAGATGAT
CTAGTTACTAAGTCGATTGTTGTGTTTCATAAACCTCTgataaaatcttt
tcaaatcgCCTTTCCAAGTTGATTGACATGATCACTGAACCAACTTTCAA
CTTTGCGTTGAAAGTAAAAAGGAAACAGTAACAACCATCTTAAATGTGTT
TCATGTTGCTTCGGCCTTTGCCGACCTTCGCtcgaaaaaagatatttgta
TCACAGATGGCTCTCGCCAATTCGAACTCGAATTCGAACTGGGAATCTAG
TTTGTTCGAATTcaagagagattcgaattatagaaagtattttaagaggg
tttctcctttACGGGGCTggaaaaaagttcgaattatagagagattcGAA
TGAGTTTATTGTATCTCTCTTCCCAGCTGACTTTTAGTACTTTATCTGTG
TAATAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018321-exon-sc0000295-1491911889:227936..229191 | TCONS_00018321-exon-sc0000295-1491911889:227936..229191 | Clytia hemisphaerica | exon |
| TCONS_00018321-exon-sc0000295-1510915933:227936..229191 | TCONS_00018321-exon-sc0000295-1510915933:227936..229191 | Clytia hemisphaerica | exon |
| TCONS_00018321-exon-sc0000295-1575043694:227936..229191 | TCONS_00018321-exon-sc0000295-1575043694:227936..229191 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000295 | supercontig | sc0000295:227936..229191 . |
Blast
The following BLAST results are available for this feature:
|
