TCONS_00018219 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018219
Unique NameTCONS_00018219
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1644

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018219 ID=TCONS_00018219|Name=TCONS_00018219|organism=Clytia hemisphaerica|type=transcript|length=1644bp
GCTTTATCAACATACACTTACATTTTTAGAGGTACCCTCAACATTCCATT
CTGctatatatttgaaaagaataaCGGTTATCTCTTAAAATTAAGTGTTG
CTTAAATTTACAGTCTGAATTTTGTTATATTGCTTCTTTTAAAATTAGTA
AGATTAAGGAAAAAACAGTAAATGTATTTAttggaatttttcataaaata
caATGTCATTATACACACAATCGTTAGCTGCTATCTAAAATGTGGTACCC
TTAAACATAACCATCGGTCAGGCTATGTTGGACCAATATATACATCCAGG
AAGCCAGCCAAGGAGAGTTTACATTGCGAATACAAGATCAACACTAAAGA
ATATTATGGATCAAGTACTGTGTTGACATGGGAAAAGTTTGACATAAGAT
CAGACATGCCTAATTGTTTATTTAATCGGGTGCAGGTATttacaggatgt
GGGGGTGGCAAAAGAGAAGTTGCACGGTTTTGTTCATTGAATGCTGATAA
GCCATTCCCAATATATTCTCGTGATGGGTGTATTACCATTGTTTACagac
tttcaaaacaaagtatAGGTGGTAGATTCACAGCAaaatataaaactatt
tacaatCAAGATGCAGCAAATGAACTTTCGCAGGATTGTCCTAGTCTTCG
GAAGGAACTCACGTCATCAAATGGTCTTATATCAACACCACATTGGCCAA
GTCGTTACAGAGAAAACGTAGGATTCTATGATACACAAATGTGCAAATGG
GAAGTCACCCCTCAACGTACAAATGTGATGGTCGTAATAATGGATATAGA
CTTTGCCGTTGATAGGCGTCCGTCATCTTCCTCAAGAAATAAAGATGTTC
TGAAGCTGGAATACATTGatGCCAGACACTCTAGCCGTTGGACTGAGAAG
AAGTTCTATACATACATGGATGCAACAAAGTCTAAGAACTTGTACACATC
TTCTGGTTCAACGCAGACTCGTGGTTTCCGCCTGACACTCTCAGCatatg
aaaatttaaatttggataACAGAGATAATAGAGGGTTTCTTGTAGGCTAT
ATGGCTTATGGGGATCAAGTGACAACAACGACCACGACGACCACGACGAC
CACAACGACCACAACAAGTTGGCCTTCATACAACGaatttgaagaagaag
atgacaCTTTCTCATCTCCTATTGTTATTATTGTCATTGTGGTGTGTGTT
ATTAGTGTAATTGTCGGTTGTTTGTGGTGTTGTGTCAAACAATCAATGCA
AAGTCAATCTTATAACGAAAATAATGAAGAAGCAAGGGTGCCTATGAATA
GACCAGATCCATTATCACAACCAAGATTGATTAGTCATGTGGCTCATGAT
GAAGACGAAGTATTACATAATATTGAGCGGGTAAACACAAGAAACCATAT
AAATGAGACTAATGGAAGTTTACTTAATGCTGAATTGACAGACGAAGCAC
CGCCAGCCTATAATCCCCATCTCCTTTCCAATTATCCAACTGCACCACCA
CGATCAAATCGTCCACTTCAAAATAATATCAATGAAGAGGCTCCTCCTCC
ATCTTACGAAGATGTTTTGCAGGGAATGTATGGAGATAGTACGGTATAAA
ATAAAGTCTGGTTTTGAATCGAACAGGAGTTTCTACAATAACTT
Run BLAST on NCBI

protein sequence of TCONS_00018219-protein

>TCONS_00018219-protein ID=TCONS_00018219-protein|Name=TCONS_00018219-protein|organism=Clytia hemisphaerica|type=polypeptide|length=475bp
MYLLEFFIKYNVIIHTIVSCYLKCGTLKHNHRSGYVGPIYTSRKPAKESL
HCEYKINTKEYYGSSTVLTWEKFDIRSDMPNCLFNRVQVFTGCGGGKREV
ARFCSLNADKPFPIYSRDGCITIVYRLSKQSIGGRFTAKYKTIYNQDAAN
ELSQDCPSLRKELTSSNGLISTPHWPSRYRENVGFYDTQMCKWEVTPQRT
NVMVVIMDIDFAVDRRPSSSSRNKDVLKLEYIDARHSSRWTEKKFYTYMD
ATKSKNLYTSSGSTQTRGFRLTLSAYENLNLDNRDNRGFLVGYMAYGDQV
TTTTTTTTTTTTTTTSWPSYNEFEEEDDTFSSPIVIIVIVVCVISVIVGC
LWCCVKQSMQSQSYNENNEEARVPMNRPDPLSQPRLISHVAHDEDEVLHN
IERVNTRNHINETNGSLLNAELTDEAPPAYNPHLLSNYPTAPPRSNRPLQ
NNINEEAPPPSYEDVLQGMYGDSTV
Run BLAST on NCBI

transcript from alignment at sc0000291:145884..152811-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018219 ID=TCONS_00018219|Name=TCONS_00018219|organism=Clytia hemisphaerica|type=transcript|length=6928bp|location=Sequence derived from alignment at sc0000291:145884..152811- (Clytia hemisphaerica)
GCTTTATCAACATACACTTACATTTTTAGAGGTACCCTCAACATTCCATT
CTGCTATATATTTGAAAAGAATAACGGTTATCTCTTAAAATTAAGTGTTG
CTTAAATTTACAGTCTGAATTTTGTTATATTGCTTCTTTTAAAATTAGTA
AGATTAAGGAAAAAACAGTAAATGTATTTATTGGAATTTTTCATAAAATA
CAATGTCATTATACACACAATCGTTAGCTGCTATCTAAAATGTGGTACCC
TTAAACATAACCATCGGTCAGGCTATGTTGGACCAATATATACATCCAGG
AAGCCAGCCAAGGAGAGTTTACATTGCGAATACAAGATCAACACTAAAGA
ATATTATGGATCAAGTACTGTGTTGACATGGGAAAAGTTTGACATAAGAT
CAGACATGCCTAATTGTTTATTTAATCGGGTGCAGGTATTTACAGGGTAG
GTTTTTTTTTTAATCACACGTTTTCTTTGAGATAGTAATAGATAATTAAA
ATTATAAAAATGAATTGAAATACCAATGTAAATAAATGGTTCTGACTATG
CAGAACAATTTAAATAAAATGTAAATCTTCATATCTTTCTTTGAATTTTC
ATTTCTTTTTAATCATTTTTAGACTAGCTTCATTTGTTTTAGGTTGTTTC
AGAAAAACCATAAATCTATCTTGATACTGACTCGTCGTTGACACTTTTAA
GTTTTATGGTGTTCATATTATTTGTTACTATCTTAAAGTTTTTAATTTTT
TTCAGATGTGGGGGTGGCAAAAGAGAAGTTGCACGGTTTTGTTCATTGAA
TGCTGATAAGCCATTCCCAATATATTCTCGTGATGGGTGTATTACCATTG
TTTACAGACTTTCAAAACAAAGTATAGGTGGTAGATTCACAGCAAAATAT
AAAACTATTTACAATCAAGATGCAGCAAATGAACTTTCGCAGGATTGGTA
TGTACAATTTTATCTTACTGGGGAATGAAAGTTTTCTTTTGTTCTCATAC
TAATGCCAATAGAGTCCATACCCCTTTTCTCAGAATGATATGAAGTGGTA
CAATCATGAATTAGAAAAAAACTTTTTAATCTCTTATTTTAAACAATGTT
TTTTATACAATATCAGAAAATTTTTCCATTCCCTGCTTTTCAGTCCCTGC
TCTTTTGTTTTTATTTATGAGTTGCAATGCCACAATTCGATGCGGCTCAA
TTAAAGATATGTGCAAGTTGTTATATATCTTTTGTCAAATGATGCAATTA
ACTTGCAAAGGAGATTGACACAAAGGTTGATTGGATTGGAACTCGTACAA
ACACGAGAGTAACGATTATGTCAAAATAAAATCTATTTTATATTCAGTGC
GATGCGCTAATTGTAACAAAATTCCTAGTGAAAATGAAAAAAGAGTAATG
AATTGAATTTTTGGTTGCTTTTTCGTTCAGCTTCAGCTAGATTTTTGATT
TAATTTGATTTTACAATTTTTACGATTTACCAGTCCTAGTCTTCGGAAGG
AACTCACGTCATCAAATGGTCTTATATCAACACCACATTGGCCAAGTCGT
TACAGAGAAAACGTAGGATTCTATGATACACAAATGTGCAAATGGGAAGT
CACCCCTCAACGTACAAATGTGATGGTCGTAATAATGGATATAGACTTTG
CCGTTGATAGGCGTCCGTCATCTTCCTCAAGAAATAAAGATGTTCTGAAG
CTGGAATACATTGGTAAGGAAAGATATTGATTTTGCGATTTTTGAATTAT
AAATAAGGCATTTGTTATTTTGAGTCTATTGTATTAAAACATCAAGCAAA
AGCTTTTTACCTATTTTAAATCCATTTTTAAATAGGGCCTCTCAAAATTT
TCCTCATTTAGAATTGAACTTTTCTATAGCTTTTGTTTTATTTTAGATGC
CAGACACTCTAGCCGTTGGACTGAGAAGAAGTTCTATACATACATGGATG
CAACAAAGTCTAAGAACTTGTACACATCTTCTGGTTCAACGCAGACTCGT
GGTTTCCGCCTGACACTCTCAGCATATGAAAATTTAAATTTGGATAACAG
AGATAATAGAGGGTTTCTTGTAGGCTATATGGCTTATGGGGATCAAGGTA
GAGTTTCATTTTTACTGAACCAGGCTGCATTGTTTGAGGCGTGTGATAGC
ACGCGCACACCTCCACACACACCTAAAATCTTTGAGGAGAGNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATCCCAAAA
TTAAATCACATATGTCGGTTTATAATGTTTGTATGGTTGTTTTAAAAAGC
AAAATACATAACATTTGATTAGAATTCGACTGGGACTTACCAGAGGTTTA
ATTTACCTAGGAATAGGAATAGTGTATTTTTCATCTTAATCTTTCAGTGA
CAACAACGACCACGACGACCACGACGACCACAACGACCACAACAAGTTGG
CCTTCATACAACGAATTTGAAGAAGAAGATGACACTTTCTCATCTCCTAT
TGTTATTATTGTCATTGTGGTGTGTGTTATTAGTGTAATTGTCGGTTGTT
TGTGGTGTTGTGTCAAACAATCAATGCAAAGTCAATCTTATAACGAAAAT
AATGAAGAAGCAAGGGTGCCTATGAATAGACCAGATCCATTATCACAACC
AAGATTGATTAGTCATGTGGCTCATGATGAAGACGAAGTATTACATAATA
TTGAGCGGGTAAACACAAGAAACCATATAAATGAGACTAATGGAAGTTTA
CTTAATGCTGAATTGACAGGTATATTATTAGTTACACGGTCGACCCGAGG
TGGGATACCCCATATCCCAACTCATAACGACCGTGTAACGGATTTATCCC
GGTGAAGTCCCTTTTCATGTTTTCCAAAAGCACGAAAAACTTTCAGAACT
CTCCAAAGGTAGGGTGTGGCGTCAAAACCCAAAGTCAAAAAATTCAAGAT
GTAGTATTTTTTTGTGAAAATTTAACCTATTCCAAGACATTTTGCACAAT
TTTTAAGGTCAGAAGTCCAAAATTGGTTGTTNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTATGTTGAATA
TTAGTGCAAGACACCATTTACAAACCATTTTGACCCTTTACTGGGCTTTC
ATAGTCTTAAAATGGGCAAAAAATGCCATTTTTCACTATTTTTGACAATA
GTGCGAATCGGTACCCCCAGGGGGAAACAACCAATTTTGGACTTCCGACC
TTAAAAATTGTGCAAAATGTCTTGGAATAGGTTAACTTTTCACAAAAAAA
TACTACATCTTGAATTTTTTGACTTCACCTAAAAAATGGCTGTTGATGCC
ACACCCTACGCAAAGGGGATACTTACATCAAAGAGCTACAAAGTGAATCA
AACTGTGAAAGTGGGATTTGTGAAAAAAAAACACCGCAATGTATCCATAT
AAATATAAAAATGAAATAACTTTTTAAAGTCCTGTTTGTTGACTTCTCAA
AGCCGACAATTCATGTTTCTATCCTTTTTTGTCTTTTCTGTCTTTTCAAA
ACAAAACATTTGAATCTTGATAAACATCCAAAAGCGCATTCCTCAATATG
CAATGTCTTCTTTTTTTCTCAATCGAACGTGAGGAAGACAGATACGGTAT
ATATCCCACCTCCACGTGATGTCTTTTGACCAATGAAATCGCTAGAATCT
TACTGATGCGGATCGTATCACATTTTTGTGATTCTCTGTTAGTTTAAGAA
GGGTGTTTTAAAAGTTGCTCTAAAAAATTTTATCCAATCAGAGAGTTTGT
CTATTTGTTTTTCATGCTGCTTGCATGTTGGAATTAATTTACTGTATTAA
ACGAAAAGTGAAAAAAGCTAATCTCATCCCATTGAAAAAGTCTTAGCTTT
TACTAGAAATAGATCAGCATAAGGATTTTAAAAAGTCCATCAAATTGCTA
ATTTGATAAAAAAATTAACTTTTTAGTTAGGTTTATCGATTTCATCAATA
CAATATTTGAGTTTTTTTTTTCGAATTCGCTTTTAACCAATTTATTTTTT
ATCTATGCTATACAATCGGGCTTATGAATAATTTGAAGCTATTGAAGTTG
AGCCCAGTGCGTTGCGTACGTTCGACTATGGTTAATAGCTTTCTAATCTC
ATACTTATTATTGATTATTTTTCAGACGAAGCACCGCCAGCCTATAATCC
CCATCTCCTTTCCAATTATCCAACTGCACCACCACGATCAAATCGTCCAC
TTCAAAATAATATCAATGAAGAGGCTCCTCCTCCATCTTACGAAGATGTT
TTGCAGGGAATGTATGGAGATAGTACGGTATAAAATAAAGTCTGGTTTTG
AATCGAACAGGAGTTTCTACAATAACTT

Coding sequence (CDS) from alignment at sc0000291:145884..152811-

>TCONS_00018219 ID=TCONS_00018219|Name=TCONS_00018219|organism=Clytia hemisphaerica|type=CDS|length=8568bp|location=Sequence derived from alignment at sc0000291:145884..152811- (Clytia hemisphaerica)
ACGAAGCACCGCCAGCCTATAATCCCCATCTCCTTTCCAATTATCCAACT
GCACCACCACGATCAAATCGTCCACTTCAAAATAATATCAATGAAGAGGC
TCCTCCTCCATCTTACGAAGATGTTTTGCAGGGAATGTATGGAGATAGTA
CGGTATAATGACAACAACGACCACGACGACCACGACGACCACAACGACCA
CAACAAGTTGGCCTTCATACAACGAATTTGAAGAAGAAGATGACACTTTC
TCATCTCCTATTGTTATTATTGTCATTGTGGTGTGTGTTATTAGTGTAAT
TGTCGGTTGTTTGTGGTGTTGTGTCAAACAATCAATGCAAAGTCAATCTT
ATAACGAAAATAATGAAGAAGCAAGGGTGCCTATGAATAGACCAGATCCA
TTATCACAACCAAGATTGATTAGTCATGTGGCTCATGATGAAGACGAAGT
ATTACATAATATTGAGCGGGTAAACACAAGAAACCATATAAATGAGACTA
ATGGAAGTTTACTTAATGCTGAATTGACAGATGCCAGACACTCTAGCCGT
TGGACTGAGAAGAAGTTCTATACATACATGGATGCAACAAAGTCTAAGAA
CTTGTACACATCTTCTGGTTCAACGCAGACTCGTGGTTTCCGCCTGACAC
TCTCAGCATATGAAAATTTAAATTTGGATAACAGAGATAATAGAGGGTTT
CTTGTAGGCTATATGGCTTATGGGGATCAAGTCCTAGTCTTCGGAAGGAA
CTCACGTCATCAAATGGTCTTATATCAACACCACATTGGCCAAGTCGTTA
CAGAGAAAACGTAGGATTCTATGATACACAAATGTGCAAATGGGAAGTCA
CCCCTCAACGTACAAATGTGATGGTCGTAATAATGGATATAGACTTTGCC
GTTGATAGGCGTCCGTCATCTTCCTCAAGAAATAAAGATGTTCTGAAGCT
GGAATACATTGATGTGGGGGTGGCAAAAGAGAAGTTGCACGGTTTTGTTC
ATTGAATGCTGATAAGCCATTCCCAATATATTCTCGTGATGGGTGTATTA
CCATTGTTTACAGACTTTCAAAACAAAGTATAGGTGGTAGATTCACAGCA
AAATATAAAACTATTTACAATCAAGATGCAGCAAATGAACTTTCGCAGGA
TTGATGTATTTATTGGAATTTTTCATAAAATACAATGTCATTATACACAC
AATCGTTAGCTGCTATCTAAAATGTGGTACCCTTAAACATAACCATCGGT
CAGGCTATGTTGGACCAATATATACATCCAGGAAGCCAGCCAAGGAGAGT
TTACATTGCGAATACAAGATCAACACTAAAGAATATTATGGATCAAGTAC
TGTGTTGACATGGGAAAAGTTTGACATAAGATCAGACATGCCTAATTGTT
TATTTAATCGGGTGCAGGTATTTACAGGACGAAGCACCGCCAGCCTATAA
TCCCCATCTCCTTTCCAATTATCCAACTGCACCACCACGATCAAATCGTC
CACTTCAAAATAATATCAATGAAGAGGCTCCTCCTCCATCTTACGAAGAT
GTTTTGCAGGGAATGTATGGAGATAGTACGGTATAATGACAACAACGACC
ACGACGACCACGACGACCACAACGACCACAACAAGTTGGCCTTCATACAA
CGAATTTGAAGAAGAAGATGACACTTTCTCATCTCCTATTGTTATTATTG
TCATTGTGGTGTGTGTTATTAGTGTAATTGTCGGTTGTTTGTGGTGTTGT
GTCAAACAATCAATGCAAAGTCAATCTTATAACGAAAATAATGAAGAAGC
AAGGGTGCCTATGAATAGACCAGATCCATTATCACAACCAAGATTGATTA
GTCATGTGGCTCATGATGAAGACGAAGTATTACATAATATTGAGCGGGTA
AACACAAGAAACCATATAAATGAGACTAATGGAAGTTTACTTAATGCTGA
ATTGACAGATGCCAGACACTCTAGCCGTTGGACTGAGAAGAAGTTCTATA
CATACATGGATGCAACAAAGTCTAAGAACTTGTACACATCTTCTGGTTCA
ACGCAGACTCGTGGTTTCCGCCTGACACTCTCAGCATATGAAAATTTAAA
TTTGGATAACAGAGATAATAGAGGGTTTCTTGTAGGCTATATGGCTTATG
GGGATCAAGTCCTAGTCTTCGGAAGGAACTCACGTCATCAAATGGTCTTA
TATCAACACCACATTGGCCAAGTCGTTACAGAGAAAACGTAGGATTCTAT
GATACACAAATGTGCAAATGGGAAGTCACCCCTCAACGTACAAATGTGAT
GGTCGTAATAATGGATATAGACTTTGCCGTTGATAGGCGTCCGTCATCTT
CCTCAAGAAATAAAGATGTTCTGAAGCTGGAATACATTGATGTGGGGGTG
GCAAAAGAGAAGTTGCACGGTTTTGTTCATTGAATGCTGATAAGCCATTC
CCAATATATTCTCGTGATGGGTGTATTACCATTGTTTACAGACTTTCAAA
ACAAAGTATAGGTGGTAGATTCACAGCAAAATATAAAACTATTTACAATC
AAGATGCAGCAAATGAACTTTCGCAGGATTGATGTATTTATTGGAATTTT
TCATAAAATACAATGTCATTATACACACAATCGTTAGCTGCTATCTAAAA
TGTGGTACCCTTAAACATAACCATCGGTCAGGCTATGTTGGACCAATATA
TACATCCAGGAAGCCAGCCAAGGAGAGTTTACATTGCGAATACAAGATCA
ACACTAAAGAATATTATGGATCAAGTACTGTGTTGACATGGGAAAAGTTT
GACATAAGATCAGACATGCCTAATTGTTTATTTAATCGGGTGCAGGTATT
TACAGGACGAAGCACCGCCAGCCTATAATCCCCATCTCCTTTCCAATTAT
CCAACTGCACCACCACGATCAAATCGTCCACTTCAAAATAATATCAATGA
AGAGGCTCCTCCTCCATCTTACGAAGATGTTTTGCAGGGAATGTATGGAG
ATAGTACGGTATAATGACAACAACGACCACGACGACCACGACGACCACAA
CGACCACAACAAGTTGGCCTTCATACAACGAATTTGAAGAAGAAGATGAC
ACTTTCTCATCTCCTATTGTTATTATTGTCATTGTGGTGTGTGTTATTAG
TGTAATTGTCGGTTGTTTGTGGTGTTGTGTCAAACAATCAATGCAAAGTC
AATCTTATAACGAAAATAATGAAGAAGCAAGGGTGCCTATGAATAGACCA
GATCCATTATCACAACCAAGATTGATTAGTCATGTGGCTCATGATGAAGA
CGAAGTATTACATAATATTGAGCGGGTAAACACAAGAAACCATATAAATG
AGACTAATGGAAGTTTACTTAATGCTGAATTGACAGATGCCAGACACTCT
AGCCGTTGGACTGAGAAGAAGTTCTATACATACATGGATGCAACAAAGTC
TAAGAACTTGTACACATCTTCTGGTTCAACGCAGACTCGTGGTTTCCGCC
TGACACTCTCAGCATATGAAAATTTAAATTTGGATAACAGAGATAATAGA
GGGTTTCTTGTAGGCTATATGGCTTATGGGGATCAAGTCCTAGTCTTCGG
AAGGAACTCACGTCATCAAATGGTCTTATATCAACACCACATTGGCCAAG
TCGTTACAGAGAAAACGTAGGATTCTATGATACACAAATGTGCAAATGGG
AAGTCACCCCTCAACGTACAAATGTGATGGTCGTAATAATGGATATAGAC
TTTGCCGTTGATAGGCGTCCGTCATCTTCCTCAAGAAATAAAGATGTTCT
GAAGCTGGAATACATTGATGTGGGGGTGGCAAAAGAGAAGTTGCACGGTT
TTGTTCATTGAATGCTGATAAGCCATTCCCAATATATTCTCGTGATGGGT
GTATTACCATTGTTTACAGACTTTCAAAACAAAGTATAGGTGGTAGATTC
ACAGCAAAATATAAAACTATTTACAATCAAGATGCAGCAAATGAACTTTC
GCAGGATTGATGTATTTATTGGAATTTTTCATAAAATACAATGTCATTAT
ACACACAATCGTTAGCTGCTATCTAAAATGTGGTACCCTTAAACATAACC
ATCGGTCAGGCTATGTTGGACCAATATATACATCCAGGAAGCCAGCCAAG
GAGAGTTTACATTGCGAATACAAGATCAACACTAAAGAATATTATGGATC
AAGTACTGTGTTGACATGGGAAAAGTTTGACATAAGATCAGACATGCCTA
ATTGTTTATTTAATCGGGTGCAGGTATTTACAGGACGAAGCACCGCCAGC
CTATAATCCCCATCTCCTTTCCAATTATCCAACTGCACCACCACGATCAA
ATCGTCCACTTCAAAATAATATCAATGAAGAGGCTCCTCCTCCATCTTAC
GAAGATGTTTTGCAGGGAATGTATGGAGATAGTACGGTATAATGACAACA
ACGACCACGACGACCACGACGACCACAACGACCACAACAAGTTGGCCTTC
ATACAACGAATTTGAAGAAGAAGATGACACTTTCTCATCTCCTATTGTTA
TTATTGTCATTGTGGTGTGTGTTATTAGTGTAATTGTCGGTTGTTTGTGG
TGTTGTGTCAAACAATCAATGCAAAGTCAATCTTATAACGAAAATAATGA
AGAAGCAAGGGTGCCTATGAATAGACCAGATCCATTATCACAACCAAGAT
TGATTAGTCATGTGGCTCATGATGAAGACGAAGTATTACATAATATTGAG
CGGGTAAACACAAGAAACCATATAAATGAGACTAATGGAAGTTTACTTAA
TGCTGAATTGACAGATGCCAGACACTCTAGCCGTTGGACTGAGAAGAAGT
TCTATACATACATGGATGCAACAAAGTCTAAGAACTTGTACACATCTTCT
GGTTCAACGCAGACTCGTGGTTTCCGCCTGACACTCTCAGCATATGAAAA
TTTAAATTTGGATAACAGAGATAATAGAGGGTTTCTTGTAGGCTATATGG
CTTATGGGGATCAAGTCCTAGTCTTCGGAAGGAACTCACGTCATCAAATG
GTCTTATATCAACACCACATTGGCCAAGTCGTTACAGAGAAAACGTAGGA
TTCTATGATACACAAATGTGCAAATGGGAAGTCACCCCTCAACGTACAAA
TGTGATGGTCGTAATAATGGATATAGACTTTGCCGTTGATAGGCGTCCGT
CATCTTCCTCAAGAAATAAAGATGTTCTGAAGCTGGAATACATTGATGTG
GGGGTGGCAAAAGAGAAGTTGCACGGTTTTGTTCATTGAATGCTGATAAG
CCATTCCCAATATATTCTCGTGATGGGTGTATTACCATTGTTTACAGACT
TTCAAAACAAAGTATAGGTGGTAGATTCACAGCAAAATATAAAACTATTT
ACAATCAAGATGCAGCAAATGAACTTTCGCAGGATTGATGTATTTATTGG
AATTTTTCATAAAATACAATGTCATTATACACACAATCGTTAGCTGCTAT
CTAAAATGTGGTACCCTTAAACATAACCATCGGTCAGGCTATGTTGGACC
AATATATACATCCAGGAAGCCAGCCAAGGAGAGTTTACATTGCGAATACA
AGATCAACACTAAAGAATATTATGGATCAAGTACTGTGTTGACATGGGAA
AAGTTTGACATAAGATCAGACATGCCTAATTGTTTATTTAATCGGGTGCA
GGTATTTACAGGACGAAGCACCGCCAGCCTATAATCCCCATCTCCTTTCC
AATTATCCAACTGCACCACCACGATCAAATCGTCCACTTCAAAATAATAT
CAATGAAGAGGCTCCTCCTCCATCTTACGAAGATGTTTTGCAGGGAATGT
ATGGAGATAGTACGGTATAATGACAACAACGACCACGACGACCACGACGA
CCACAACGACCACAACAAGTTGGCCTTCATACAACGAATTTGAAGAAGAA
GATGACACTTTCTCATCTCCTATTGTTATTATTGTCATTGTGGTGTGTGT
TATTAGTGTAATTGTCGGTTGTTTGTGGTGTTGTGTCAAACAATCAATGC
AAAGTCAATCTTATAACGAAAATAATGAAGAAGCAAGGGTGCCTATGAAT
AGACCAGATCCATTATCACAACCAAGATTGATTAGTCATGTGGCTCATGA
TGAAGACGAAGTATTACATAATATTGAGCGGGTAAACACAAGAAACCATA
TAAATGAGACTAATGGAAGTTTACTTAATGCTGAATTGACAGATGCCAGA
CACTCTAGCCGTTGGACTGAGAAGAAGTTCTATACATACATGGATGCAAC
AAAGTCTAAGAACTTGTACACATCTTCTGGTTCAACGCAGACTCGTGGTT
TCCGCCTGACACTCTCAGCATATGAAAATTTAAATTTGGATAACAGAGAT
AATAGAGGGTTTCTTGTAGGCTATATGGCTTATGGGGATCAAGTCCTAGT
CTTCGGAAGGAACTCACGTCATCAAATGGTCTTATATCAACACCACATTG
GCCAAGTCGTTACAGAGAAAACGTAGGATTCTATGATACACAAATGTGCA
AATGGGAAGTCACCCCTCAACGTACAAATGTGATGGTCGTAATAATGGAT
ATAGACTTTGCCGTTGATAGGCGTCCGTCATCTTCCTCAAGAAATAAAGA
TGTTCTGAAGCTGGAATACATTGATGTGGGGGTGGCAAAAGAGAAGTTGC
ACGGTTTTGTTCATTGAATGCTGATAAGCCATTCCCAATATATTCTCGTG
ATGGGTGTATTACCATTGTTTACAGACTTTCAAAACAAAGTATAGGTGGT
AGATTCACAGCAAAATATAAAACTATTTACAATCAAGATGCAGCAAATGA
ACTTTCGCAGGATTGATGTATTTATTGGAATTTTTCATAAAATACAATGT
CATTATACACACAATCGTTAGCTGCTATCTAAAATGTGGTACCCTTAAAC
ATAACCATCGGTCAGGCTATGTTGGACCAATATATACATCCAGGAAGCCA
GCCAAGGAGAGTTTACATTGCGAATACAAGATCAACACTAAAGAATATTA
TGGATCAAGTACTGTGTTGACATGGGAAAAGTTTGACATAAGATCAGACA
TGCCTAATTGTTTATTTAATCGGGTGCAGGTATTTACAGGACGAAGCACC
GCCAGCCTATAATCCCCATCTCCTTTCCAATTATCCAACTGCACCACCAC
GATCAAATCGTCCACTTCAAAATAATATCAATGAAGAGGCTCCTCCTCCA
TCTTACGAAGATGTTTTGCAGGGAATGTATGGAGATAGTACGGTATAATG
ACAACAACGACCACGACGACCACGACGACCACAACGACCACAACAAGTTG
GCCTTCATACAACGAATTTGAAGAAGAAGATGACACTTTCTCATCTCCTA
TTGTTATTATTGTCATTGTGGTGTGTGTTATTAGTGTAATTGTCGGTTGT
TTGTGGTGTTGTGTCAAACAATCAATGCAAAGTCAATCTTATAACGAAAA
TAATGAAGAAGCAAGGGTGCCTATGAATAGACCAGATCCATTATCACAAC
CAAGATTGATTAGTCATGTGGCTCATGATGAAGACGAAGTATTACATAAT
ATTGAGCGGGTAAACACAAGAAACCATATAAATGAGACTAATGGAAGTTT
ACTTAATGCTGAATTGACAGATGCCAGACACTCTAGCCGTTGGACTGAGA
AGAAGTTCTATACATACATGGATGCAACAAAGTCTAAGAACTTGTACACA
TCTTCTGGTTCAACGCAGACTCGTGGTTTCCGCCTGACACTCTCAGCATA
TGAAAATTTAAATTTGGATAACAGAGATAATAGAGGGTTTCTTGTAGGCT
ATATGGCTTATGGGGATCAAGTCCTAGTCTTCGGAAGGAACTCACGTCAT
CAAATGGTCTTATATCAACACCACATTGGCCAAGTCGTTACAGAGAAAAC
GTAGGATTCTATGATACACAAATGTGCAAATGGGAAGTCACCCCTCAACG
TACAAATGTGATGGTCGTAATAATGGATATAGACTTTGCCGTTGATAGGC
GTCCGTCATCTTCCTCAAGAAATAAAGATGTTCTGAAGCTGGAATACATT
GATGTGGGGGTGGCAAAAGAGAAGTTGCACGGTTTTGTTCATTGAATGCT
GATAAGCCATTCCCAATATATTCTCGTGATGGGTGTATTACCATTGTTTA
CAGACTTTCAAAACAAAGTATAGGTGGTAGATTCACAGCAAAATATAAAA
CTATTTACAATCAAGATGCAGCAAATGAACTTTCGCAGGATTGATGTATT
TATTGGAATTTTTCATAAAATACAATGTCATTATACACACAATCGTTAGC
TGCTATCTAAAATGTGGTACCCTTAAACATAACCATCGGTCAGGCTATGT
TGGACCAATATATACATCCAGGAAGCCAGCCAAGGAGAGTTTACATTGCG
AATACAAGATCAACACTAAAGAATATTATGGATCAAGTACTGTGTTGACA
TGGGAAAAGTTTGACATAAGATCAGACATGCCTAATTGTTTATTTAATCG
GGTGCAGGTATTTACAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010240XLOC_010240Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018219-proteinTCONS_00018219-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018219-exon-sc0000291-1575043694:152366..152811TCONS_00018219-exon-sc0000291-1575043694:152366..152811Clytia hemisphaericaexon
TCONS_00018219-exon-sc0000291-1575043694:151865..152056TCONS_00018219-exon-sc0000291-1575043694:151865..152056Clytia hemisphaericaexon
TCONS_00018219-exon-sc0000291-1575043694:151099..151328TCONS_00018219-exon-sc0000291-1575043694:151099..151328Clytia hemisphaericaexon
TCONS_00018219-exon-sc0000291-1575043694:150715..150915TCONS_00018219-exon-sc0000291-1575043694:150715..150915Clytia hemisphaericaexon
TCONS_00018219-exon-sc0000291-1575043694:149843..150214TCONS_00018219-exon-sc0000291-1575043694:149843..150214Clytia hemisphaericaexon
TCONS_00018219-exon-sc0000291-1575043694:145884..146086TCONS_00018219-exon-sc0000291-1575043694:145884..146086Clytia hemisphaericaexon
TCONS_00018219-exon-sc0000291-1510915933:152366..152811TCONS_00018219-exon-sc0000291-1510915933:152366..152811Clytia hemisphaericaexon
TCONS_00018219-exon-sc0000291-1510915933:151865..152056TCONS_00018219-exon-sc0000291-1510915933:151865..152056Clytia hemisphaericaexon
TCONS_00018219-exon-sc0000291-1510915933:151099..151328TCONS_00018219-exon-sc0000291-1510915933:151099..151328Clytia hemisphaericaexon
TCONS_00018219-exon-sc0000291-1510915933:150715..150915TCONS_00018219-exon-sc0000291-1510915933:150715..150915Clytia hemisphaericaexon
TCONS_00018219-exon-sc0000291-1510915933:149843..150214TCONS_00018219-exon-sc0000291-1510915933:149843..150214Clytia hemisphaericaexon
TCONS_00018219-exon-sc0000291-1510915933:145884..146086TCONS_00018219-exon-sc0000291-1510915933:145884..146086Clytia hemisphaericaexon
TCONS_00018219-exon-sc0000291-1491911889:152366..152811TCONS_00018219-exon-sc0000291-1491911889:152366..152811Clytia hemisphaericaexon
TCONS_00018219-exon-sc0000291-1491911889:151865..152056TCONS_00018219-exon-sc0000291-1491911889:151865..152056Clytia hemisphaericaexon
TCONS_00018219-exon-sc0000291-1491911889:151099..151328TCONS_00018219-exon-sc0000291-1491911889:151099..151328Clytia hemisphaericaexon
TCONS_00018219-exon-sc0000291-1491911889:150715..150915TCONS_00018219-exon-sc0000291-1491911889:150715..150915Clytia hemisphaericaexon
TCONS_00018219-exon-sc0000291-1491911889:149843..150214TCONS_00018219-exon-sc0000291-1491911889:149843..150214Clytia hemisphaericaexon
TCONS_00018219-exon-sc0000291-1491911889:145884..146086TCONS_00018219-exon-sc0000291-1491911889:145884..146086Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000291supercontigsc0000291:145884..152811 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.55756	1.56708	1.34366	1.2324	8.63521	6.29673	10.0124	10.8019	6.89597	6.65793	12.3486	5.96051	12.9568	12.3287	3.81851	4.61007	4.95541	5.45959	10.0394	8.93797	8.00776	8.14993	3.23157	5.69553	14.5197	13.0769	8.47509	9.44282	2.19526	2.06888
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000859CUB_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00018219 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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