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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018214 ID=TCONS_00018214|Name=TCONS_00018214|organism=Clytia hemisphaerica|type=transcript|length=2106bp tagtagtaaaaaaaacaaacaacaacaacaaacaaattAACAATAAATAT CTAAAGAAATGACATTGGCAGAATCAACATTGTTGAAAGTCGGGTTTTGG TGATTGGTTTCTGGACCTTGTTTTATATACTTCTTTACCAACAAGAAATg aattcatttgatttttttataagacacTATGTTATAGTACATGTTGTTAC TTGCTATTATACATATTATAAATGTGGTACCCTTGAATATAACGGTAGTT CGGGCATTGTTGCACCAATGTATACAAATAAAAAGCCTGAGTCAGATGAC TTGTACTGTGTATACAAGATCAATGCTAACCAGTTCAATTCCGACAATAT CAATTTTATTACCTTAACATGGTCCAGATTTGATATACCATCAAACATGC CAGATTGTTTCAATAATTTCGTGCTAGTCTCAACCGGATGTGGAATTAAC AAAGAAGAAGTTGGAAGATTTTGTTCATTGAATTCTGACAAGCCTTTCCC GATTTTATCTCGTGACGGTTGTATTGAAATtatttacagaatttcaaaac aaattgctAACACGCCTGTTCAATTTAAAGCATATTATGACAATGAAAAT CTTTACAGATATGGTCTTGACAATAAATGCCCTGGTCCTAAGCAAGAACT GACTTTGTCAAGTGGTCTAATAGCAACACCACATTGGCCAGACCCTTACA GAAGTCGAGTTAGCTACACTGAAACCTGTGAATGGCGGATCACCCCACAA CGTACACATATGATGATTGTTATAATCGATTTAGACTTATctcaaagaaa ttttattaaattgaaGTATTATAATACGAAAGATTACAATCGTTGGACTG AGAAAAAGCTGTATGCTATTTACTCTGATTCAGAAAAACTTTATGCAACT TCAAGTTTCACAGTGTTGTTCAAAGCTtattcaaaccatcaaaaagaaaa cagagGATTTCTTATTGGTTATATGGCTTACGGGGATGAAGTGACAACTA CGACTGTTGCTCCTACAACTTCATACGATGACGAAGAAGACGAAGATTTT TCCTCGTCATCATCTTTCATTTCCATCATGGTGCTTGCCATATGTGCGGT TATGGTGTGTCTCTGTTGTTTATATTGTAGGGTTAAGAAGGGTACAGGTG GGAGTAATGGTGAAGTCACAATACCGATAAATACACCTAGTCctaatgaa gatgaagatgaagaactAAATCATATAGACCAAAGAAACTCGATGACTAG TGTAAACAACACCAATGGAAATTTAACTGATACTCAATTGACAGACGAAA CACCGCCAGCCTACAATCCACATTCCAATTATCCATCTGCACTACCACGA TCAAATCGTTCACCTCAAAATAATATCAACGAAGAGGCTCCTCCACCATC TTACGAAGATGTTTTGCAGGGAACGTATGGGCATAGTATGGCataaaaca tttgaaatttttgtaaatatgatGATATAGTACCATTGATCATTTTGTGA GACGGAAATCTTTTTTAGACTTTCCTGGCTAGGCGAGacccagtttgcag agtgtggTACGTTTGCTGGAGATCTCGAGTGCACCACTCGGAAAGAGTCG AGTgcaggtgcaaaatttgaggttttcacGTGCAAGTGCAGACGGTTTTT TGACCCCAAGTGCAGCTAATTTAacaattttttgcctttttgggccaatt tccgAGGTATAGGTGCACCTTATCCGGACCAAAATTATCAGGTTTTTCCT CGAGTGCAGCCTTGCCATTCTTTGCAAACTAGGGCAATACCAATTTAATT TGCTGTTCTTCGGTCCTGGCTGACTAAATGAAagatttattcttatttta ccgaccgactgACCCATATTTTTTTAACGATCTGCCTGTAGAACagcaaa ttaaattggtctcgccctANCGACCATATTTTTTAACGATCTGCCTGTAG AACagcaaattaaattggtctcccCCTAGATGAAACATTTATGCAGCCTT TGATTAGGTCACAAAATACTCTTCTTTCAGTTATTTATTATTCATGatca aaatggtcaaaacaaAGCTTCAAGACTAGCTTTTTTAAACGGAACGCGGA CACACA Run BLAST on NCBI transcript from alignment at sc0000291:129274..136142- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018214 ID=TCONS_00018214|Name=TCONS_00018214|organism=Clytia hemisphaerica|type=transcript|length=6869bp|location=Sequence derived from alignment at sc0000291:129274..136142- (Clytia hemisphaerica) TAGTAGTAAAAAAAACAAACAACAACAACAAACAAATTAACAATAAATAT
CTAAAGAAATGACATTGGCAGAATCAACATTGTTGAAAGTCGGGTTTTGG
TGATTGGTTTCTGGACCTTGTTTTATATACTTCTTTACCAACAAGAAATG
AATTCATTTGATTTTTTTATAAGACACTATGTTATAGTACATGTTGTTAC
TTGCTATTATACATATTATAAATGTGGTACCCTTGAATATAACGGTAGTT
CGGGCATTGTTGCACCAATGTATACAAATAAAAAGCCTGAGTCAGATGAC
TTGTACTGTGTATACAAGATCAATGCTAACCAGTTCAATTCCGACAATAT
CAATTTTATTACCTTAACATGGTCCAGATTTGATATACCATCAAACATGC
CAGATTGTTTCAATAATTTCGTGCTAGTCTCAACCGGGTAAGCTTTTTGT
TGATACCATACAGTTTTCAGCTAAAAAAGTTTATAAATCTTTATTCATTC
TGGCAGAATTTTATTTTATTTATTTGAATATAATCTAGATTTCACTTTTC
ACCAGAATTTTATGCAAACATGAACATTCAGATATTTTGGTTTGTTTTCT
TTTTCTTTTACAAATGAAAGCCAATTTAGCTCTTTCAAACTGTTTGACNA
AATACAAAATTCTAATTCTTAGTTATTTAGCTAGTAGTAGTTTTTCTCAC
ATGAGTATTTATATATGCATATAACTTGTAAAAAGTATAAATAAAAGTAT
AAAATTGTCAATACAATAATAAACACGTTTCTTCCAAGAAGACTCATTCA
ATTTTGGCTACGAGAAAAAAATCAGTATATAACGGCGTGCTATAGCTATC
CAGCAAGTAACTTGCAACATCCATCATCATTATATTTATAGGAGAATTAA
TACCCTAGGCTCTAATAAACTTCTCGATATTAAAGTTTAAATTTCAATGT
AATTGATATGGTTTATCTTTAATTAATTCTTTTTTCTTTGCTAGTAGTAA
AAAAACAAACAACAACAACAAACAAATTAACAATAAATATCTAAAGAAAT
GAGATTGGCAGAATCAACATTGTTGAAAGTCGGGTTTTGGTGATTGGTTT
CTGGACCTTGTTTTATATACTTCTTTACCAACAAGAAATGAATTCATTTG
ATTTTTTTATAAGACACTATGTTATAGTACATGTTGTTACTTGCTATTAT
ACATATTATAAATGTGGTACCCTTGAATATAACGGTAGTTCGGGCATTGT
TGCACCAATGTATACAAATAAAAAGCCTGAGTCAGATGACTTGTACTGTG
TATACAAGATCAATGCTAACCAGTTCAATTCCGACAATATCAATTTTATT
ACCTTAACATGGTCCAGATTTGATATACCATCAAACATGCCAGATTGTTT
CAATAATTTCGTGCTAGTCTCAACCGGGTAAGCTTTTTGTTGATAACATA
CAGTTTTCAGCTAAAAAAGTTTATAAATCTTTATTCATTCTGGCAGAATT
TTATTTTATTTATTTGAATATAATCTAGATTTCACTTTTCACCAGAATTT
TATGCAAACATGAACATTCAGATATTTTGGTTTGTTTTCTTTTTCTTTTA
CAAATGAAAGGCAATTTAGCTCTTTCAAACTGTTTGACTTCTATTAAATT
GTTACCTTGTTACTTTGAAAAAACATATTTGAGGGGATCGTTTGTAAAAA
GAGGGCATTTGTTACATAATTTTGAAAATTTTACATAATTTAATAAAGCT
AAGGACCTTGTTTTTACCTTCCCGTTTATCTATTTACGCTCAAAATGTCA
TTTTAAATACTAAAAGAATACAACTATCTAAGTTTCCATCTTAAGACACT
TCTAACTACTTTTTTTGTTCAAATAAACGTACCGCCTAGAAGGGAAAATC
TTTCCTCCTTCTGTTAAAAATTGCAAATATATATTTTTTAATTTGGCCAT
AACTTTTGATAATCTGAGTGTACTTAAATTCTCTTGTAGTTGCAGGAAGA
TTGATCTTTTAAAAATACAAGGATCTCGGGAGATTCCCCTTATTCTAAAA
GAGAGAAAATTTTGTGGCGCCCGAAACAGTACTTGAATTTTTGTTATTAC
CATAGATGTGGAATTAACAAAGAAGAAGTTGGAAGATTTTGTTCATTGAA
TTCTGACAAGCCTTTCCCGATTTTATCTCGTGACGGTTGTATTGAAATTA
TTTACAGAATTTCAAAACAAATTGCTAACACGCCTGTTCAATTTAAAGCA
TATTATGACAATGAAAATCTTTACAGATATGGTCTTGACAATAAATGGTA
TGAACAAATTTTCATTTATTTGAAATTAGGACCCCTTCCTGATTCCCAGT
CATTTGAAACAACTGACATATATGTGCCAAGCTGTCAACAACAATCATTC
ATGTTTTGAGGTCTTCATATTGAATCATTATGAAATAGAGAAATAGAAAC
TAGGCTAGCGGAATTACTCCTTGATTTACGAATCACATTTTAAATGGGTT
CCTTATAAATACTTAAACGTATTAAAATATTATAATTAGAGGAAAGTTCG
GCCGTTGCAGCATGATTGCATCATAGGGTAGTCGACAATAGGAAATGGGT
GCCCACACAACTACAAATAGTTAAAGGATTTTGAATTAATCCCAAATAAT
TTATGTCCTTGAGTTGATTAGTGGATAATTAAATTAGATGAATTATGGAG
GAAATTTTATCCCCTGAAATTTAGTTCCATTACAATGAAGCTCTGTTCTG
TTTTCTTTTGTAAACGCTGCCTTACCAAGCATATATTGATTATACCCTAT
TCATTTAGCCCTGGTCCTAAGCAAGAACTGACTTTGTCAAGTGGTCTAAT
AGCAACACCACATTGGCCAGACCCTTACAGAAGTCGAGTTAGCTACACTG
AAACCTGTGAATGGCGGATCACCCCACAACGTACACATATGATGATTGTT
ATAATCGATTTAGACTTATCTCAAAGAAATTTTATTAAATTGAAGTATTA
TAGTAAGTATTATTAAAATATATAACAATTTCTAAAACCAAGAAATTCTG
CACTCTCTGACTCGGTAGTCTTTAAGACTCTCGACATTCCAGACTTCTTA
GTTTACTGGTGTGTCTACTATTCCTATCATCGGTTGTTTATAACGAACCT
AAAAGTAAAATCAACTATGTTTTACGATACCTGAAGAAGTTCAGAAGTCT
CGTAAAAAAAGTTGAATTACTTTTTTGTTCGTTATATTTACAATTTGTTT
CTCTTGCTTTACCTATGGTTGTTTCACACACGTACACTATCAAAGCATTT
CTTGTAATTTTAGATACGAAAGATTACAATCGTTGGACTGAGAAAAAGCT
GTATGCTATTTACTCTGATTCAGAAAAACTTTATGCAACTTCAAGTTTCA
CAGTGTTGTTCAAAGCTTATTCAAACCATCAAAAAGAAAACAGAGGATTT
CTTATTGGTTATATGGCTTACGGGGATGAAGGTATAAGACCTAATGTACA
CGTGTCATTTTTGGACCTACCTCTGGGTACCCCGGTGGAGGTCCTTTAAA
TTAAACCATGTTCGTTCGTTCCTTCGTTCGTCTGTTACCAGCTTTTCTCG
CGGGATTGGCTCATTACCTTTTTCTGTTTTTTTGGCACAATGATGCAAAA
TGATGATTCCTAAAAAGTGACGCAGCCCGATTTTCGAAAAAAAAATTTTG
CCGGAAAATCTGTTTTTTTGGCATTTTCTCGAGATTTTATCATTAGTTTT
TTCTTATTTTTTGCTCAAAGATTAACAATGCCCAACAATGCCCAAAACAT
GGCCGAGTTCGATTTTTGAGAAATTTTTTTTCCCGGTGGAAAATGCCGGA
ATTATGCCGGAAATCGTCGTTTTTCAATATTCAATATTTTCAATAAAATT
GATTTTTGAAGCCGGAACTATTTAAAAATCGCTGGAACAACCTATTTTCG
CCGGAAAGACAGTTTTTCTTGAATTTCTTGAGCTGTACTTTATATTTATT
TATGAAACTTTGCACACTGATGCAAAATGACAATACCACAATTTTTCACA
CAAAATCATTATTGATAACAACCCTCACCATCAAGCATGATTCAATTGTC
AATAAAACTGATTTTTGCGACCAGAACTTTCTATTTATTTTTCCCTACAA
CCCTACCCTCTCCCACCATCAACAATCAATGATGAAAATTTGGCAGTATA
AAATGTTGACTTGGTATAGGCTTTGAGAGGTTGACTTTTCTTTCGTCAAA
ATTGAGGAGCGTCGAAAGTTGTTTTTTTATCATTTAAATGACGTCAATTT
GCTTAAAAATGCAGCCATTCCAGGCTCAGTATTTTTGTTTCAATTTGCTT
TTGGAGTTTTTAGCTAAACTGTTCTTATAAAATCAATATCGTTTTTTTTA
GTGACAACTACGACTGTTGCTCCTACAACTTCATACGATGACGAAGAAGA
CGAAGATTTTTCCTCGTCATCATCTTTCATTTCCATCATGGTGCTTGCCA
TATGTGCGGTTATGGTGTGTCTCTGTTGTTTATATTGTAGGGTTAAGAAG
GGTACAGGTGGGAGTAATGGTGAAGTCACAATACCGATAAATACACCTAG
TCCTAATGAAGATGAAGATGAAGAACTAAATCATATAGACCAAAGAAACT
CGATGACTAGTGTAAACAACACCAATGGAAATTTAACTGATACTCAATTG
ACAGGTGAATTATATTACTTTTTAGACTCATAACGTCCTTGAATCGCGCC
TTCGTATCTTAGCAGGATATGGAAAAAACAGGACCATATACGGCTATATT
GCTTTCATACATTTTGAATAGGTTCCTTTTTGGGTATAGATAGAAAGAAG
TGTAGGGTAGAAAACTTTTTGTAGTACAATGATAGTTCTGTACGGTCCCT
GGACCATAGACTACGACAGGGTCCAATTTTGCGACTACTTGTATGTATAG
AGAACATGGCAGCACTTCATGCTAATCTCCAAAGCCGTTGAAATACATTG
TAAGGTAGTATAGGTCAACAGGCGAAACTATATATTTTCAAAATAGTGCA
GTGCCGTAGCAACTGGGGGGGGGGCAAGGGGGGGGCTATGCCCCCCAANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNATCCTGTGCCCAAGTTCAGGAATTGTCATAAAGCCATTATGG
TAATAACCGGGAGGGCACATTGCTATACATTGTATTTTGCAAAATGCAAA
GTTTTTCTTTTTTAATTTGTCATAATTGTCACAATTGAGTGCATTTTCAA
GCAATCTAGAGCTCAAATTTTCAAAATTTCCCTCCTCGGGCCAAACCATG
GTTGGCCCTCGCGGTGTCACTAAACTTCAGCCCCCCCAATATGGAAATGC
TTCCTAAGGAACTGTAGTGTACCTTGAAGGAAGAAATTTTGGCGGGAATT
TAATTTGGCGGATGGCCGAAAAAGTTTTTTCAGAGGGAATTTAATTTGGC
GGTTGCAGGATATTTTTGGCCAAAAGCGTTATTAAATCAACAAAAAACCT
GTTTTAAGGTTTGAAATACATAGCTTCAGCCAGGTTTCTAGCTCTCCCCA
ACAAAGTAAGGTCCCCCCAATGGTAATCTTAGCCCCAGGTACTTTAAAGG
CCAAAATATTTCTTAGACGAGATGCTTTTAAATCTCAGCATTTAAAACTT
TGGTACAAAAGGTCTTCATACTTCACTTTTTCGTTCTTTTTCACCTTTTC
AGACGAAACACCGCCAGCCTACAATCCACATTCCAATTATCCATCTGCAC
TACCACGATCAAATCGTTCACCTCAAAATAATATCAACGAAGAGGCTCCT
CCACCATCTTACGAAGATGTTTTGCAGGGAACGTATGGGCATAGTATGGC
ATAAAACATTTGAAATTTTTGTAAATATGATGATATAGTACCATTGATCA
TTTTGTGAGACGGAAATCTTTTTTAGACTTTCCTGGCTAGGCNCCATTGA
TCATTTTGTGAGACAGGGAAATCTTTTTTAAACTTTCCTGGCTAGGCGAG
ACCCAGTTTGCAGAGTGTGGTACGTTTGCTGGAGATCTCGAGTGCACCAC
TCGGAAAGAGTCGAGTGCAGGTGCAAAATTTGAGGTTTTCACGTGCAAGT
GCAGACGGTTTTTTGACCCCAAGTGCAGCTAATTTAACAATTTTTTGCCT
TTTTGGGCCAATTTCCGAGGTATAGGTGCACCTTATCCGGACCAAAATTA
TCAGGTTTTTCCTCGAGTGCAGCCTTGCCATTCTTTGCAAACTAGGGCAA
TACCAATTTAATTTGCTGTTCTTCGGTCCTGGCTGACTAAATGAAAGATT
TATTCTTATTTTACCGACCGACTGACCCATATTTTTTTAACGATCTGCCT
GTAGAACAGCAAATTAAATTGGTCTCGCCCTANCGACCATATTTTTTAAC
GATCTGCCTGTAGAACAGCAAATTAAATTGGTCTCCCCCTAGATGAAACA
TTTATGCAGCCTTTGATTAGGTCACAAAATACTCTTCTTTCAGTTATTTA
TTATTCATGATCAAAATGGTCAAAACAAAGCTTCAAGACTAGCTTTTTTA
AACGGAACGCGGACACACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
| TCONS_00018214-exon-sc0000291-1575043694:135706..136142 | TCONS_00018214-exon-sc0000291-1575043694:135706..136142 | Clytia hemisphaerica | exon |
| TCONS_00018214-exon-sc0000291-1575043694:133846..134037 | TCONS_00018214-exon-sc0000291-1575043694:133846..134037 | Clytia hemisphaerica | exon |
| TCONS_00018214-exon-sc0000291-1575043694:133141..133334 | TCONS_00018214-exon-sc0000291-1575043694:133141..133334 | Clytia hemisphaerica | exon |
| TCONS_00018214-exon-sc0000291-1575043694:132662..132829 | TCONS_00018214-exon-sc0000291-1575043694:132662..132829 | Clytia hemisphaerica | exon |
| TCONS_00018214-exon-sc0000291-1575043694:131439..131741 | TCONS_00018214-exon-sc0000291-1575043694:131439..131741 | Clytia hemisphaerica | exon |
| TCONS_00018214-exon-sc0000291-1575043694:129903..130140 | TCONS_00018214-exon-sc0000291-1575043694:129903..130140 | Clytia hemisphaerica | exon |
| TCONS_00018214-exon-sc0000291-1575043694:129274..129847 | TCONS_00018214-exon-sc0000291-1575043694:129274..129847 | Clytia hemisphaerica | exon |
| TCONS_00018214-exon-sc0000291-1510915933:135706..136142 | TCONS_00018214-exon-sc0000291-1510915933:135706..136142 | Clytia hemisphaerica | exon |
| TCONS_00018214-exon-sc0000291-1510915933:133846..134037 | TCONS_00018214-exon-sc0000291-1510915933:133846..134037 | Clytia hemisphaerica | exon |
| TCONS_00018214-exon-sc0000291-1510915933:133141..133334 | TCONS_00018214-exon-sc0000291-1510915933:133141..133334 | Clytia hemisphaerica | exon |
| TCONS_00018214-exon-sc0000291-1510915933:132662..132829 | TCONS_00018214-exon-sc0000291-1510915933:132662..132829 | Clytia hemisphaerica | exon |
| TCONS_00018214-exon-sc0000291-1510915933:131439..131741 | TCONS_00018214-exon-sc0000291-1510915933:131439..131741 | Clytia hemisphaerica | exon |
| TCONS_00018214-exon-sc0000291-1510915933:129903..130140 | TCONS_00018214-exon-sc0000291-1510915933:129903..130140 | Clytia hemisphaerica | exon |
| TCONS_00018214-exon-sc0000291-1510915933:129274..129847 | TCONS_00018214-exon-sc0000291-1510915933:129274..129847 | Clytia hemisphaerica | exon |
| TCONS_00018214-exon-sc0000291-1491911889:135706..136142 | TCONS_00018214-exon-sc0000291-1491911889:135706..136142 | Clytia hemisphaerica | exon |
| TCONS_00018214-exon-sc0000291-1491911889:133846..134037 | TCONS_00018214-exon-sc0000291-1491911889:133846..134037 | Clytia hemisphaerica | exon |
| TCONS_00018214-exon-sc0000291-1491911889:133141..133334 | TCONS_00018214-exon-sc0000291-1491911889:133141..133334 | Clytia hemisphaerica | exon |
| TCONS_00018214-exon-sc0000291-1491911889:132662..132829 | TCONS_00018214-exon-sc0000291-1491911889:132662..132829 | Clytia hemisphaerica | exon |
| TCONS_00018214-exon-sc0000291-1491911889:131439..131741 | TCONS_00018214-exon-sc0000291-1491911889:131439..131741 | Clytia hemisphaerica | exon |
| TCONS_00018214-exon-sc0000291-1491911889:129903..130140 | TCONS_00018214-exon-sc0000291-1491911889:129903..130140 | Clytia hemisphaerica | exon |
| TCONS_00018214-exon-sc0000291-1491911889:129274..129847 | TCONS_00018214-exon-sc0000291-1491911889:129274..129847 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000291 | supercontig | sc0000291:129274..136142 - |
Blast
The following BLAST results are available for this feature:
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