TCONS_00018212 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018212
Unique NameTCONS_00018212
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3526

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018212 ID=TCONS_00018212|Name=TCONS_00018212|organism=Clytia hemisphaerica|type=transcript|length=3526bp
GAACTTTGGTCTAAATGGCAGATCGGTATGCAGAACCACTTTTGGAAAGA
GAATTCCTTagataaaatattattttcacaAAAGTTATTTGGCGGAGGAC
GCTTATCAGGTACCCGAGACCAAAACGACTGGCagcactctttttttata
tttttgtggCGATCTTGCAATTACACACCCCCATAATGCCTTTTGTCAAA
GTTACCCCCGGAAAAAATCAATTTCGTTACCATTTAATATAGAATTTTAT
TGTGCAAAGTAAATAGAGCCTATTACTCATTAGCTTTACAAATGCATACT
AACAACGTCAATAATCACAACCCATATAATGACAAAAGAGGAATTAtgaa
ctaaaaaagaaaaaaatccattgGACAAAAATTACTAATCCCATCctgat
tggctgaaaaaaaaattatacgccctgtttaaaatgtatataaagtGCCC
AAAAACTGAGTAGAGACATCCAACATCCAACATCCAACGAATACAGGGTT
GATCTACCATTGGAGGTATTGTCAGCTACATCATCGATGGCTGCATCAAA
TCCAAAAGAAATTCGTATTATGGCTGTGGGGCCTTCAGGTGTCGGGAAAT
CAACAATAGGAAATCGtcttttgaatttgaagagCAAAGATTCGAATTAT
CTAAAAACCAGTTCATCTACCCAAGGAGTTACTCAGAAACCAAAAACCAT
CAACTCAGGGCATATGTTCTACACTGATGTCCCGGGAATTCCAGACCCAA
AACCGGAAAATACAAAAGAGTACTATGATATGATCATAAAAGAAGCTAAA
AAGGAATGTACCgcaattttcattattttttctgttgataTGAGAATGGA
TAGTAATACCAAAGACCGAATCGAAGATTNAAAGGAATGTACCgcaattt
tcattattttttctgttgataTGAGAATGGATAGCCATACCAAAGACCGA
ATCGAAGATTGCTCTCTGTTGTTTGATGAAATCAGTAAAAGCTCAGCCCT
TAAGATTCTAATCTTGAATGATATGAAAGCGCAATGGCCAAACCCAGACG
AACTGGATGAGaatgataaaaatgacaaaaaagctTATTTGGACGGGAAG
GCAGAACATGACAAAGAGCGCAAAAAAGGCCATGAAGCCTATGAGAAGCA
GATCAGAGATACGACTGGTATCAAATTCAATTCAACTGTTGTGTTATACG
GTTTGAGTAAGAAATACAGTCCTGACAAAAATATGACAGATGTACTAAAG
AATTTGAAGGAAACTCTTAGAAAGTCTGGTATTGAGCCTGTGACGTCTGA
ACACCTTCGCCTTTTCGAGGGATTGGAAAAGTTGGCGATGAAAGCAAGCA
AGGATAAAGATTATgcagaaaatttaaaggaagatCAACAAAAGGTTATC
AAAAGATTAGAAGGGGAATATGCAATATGCAAAGAGCGATATGATAGTTT
TGTTGGAGTTCAACAAATTGCAGAAGAAAAAGGCAATAATAAGTGGGCAA
ATGTGTTCACACTGGGTATAAACTGGCTTGCCAACAAAGGAGTTGAAGGT
GTGGGGTACGCTGCTGCTTACTTCCTGAGTTTGCCAatgcaagaaaaaaa
aagagagctGGAAGAAGCTAAAAATAAgcttaaaagtgaaaatctaCAGC
AATCGGTAGAAGACTATCAAAAGATGATAGAAAGATTTGTAAGCTTCAAA
AAAGTtattgaaggaaaataagataTAAACTAACCCGCtgtaattttcaa
tttaaacaatgcgcattttcttttaaatttataAGCTTTTCCACCATAAA
ATACAGATAGTTTTTataatctccgagcagattctgatactccgCGCATA
GCACGTAATCAATCTAACGGTAAGTCCGGTAAGAGAACCAGTCCGCTTTG
ATCTTTCTCATCCACACTTgcgatgaatattaaatgagcttttaagtCCA
CTGATTGCCTAATGCAAAATAATCGCACCGAAATCACTTGTCAATCATAT
ATTCAAACAATACATAAACAATGGAACCaagtcgctttcgttttcatGTT
CAAGCAGGTCAAATCATCACATTCGCCATATCCTTTAGAACAGAGCGTGG
TTTGTGCGGAGTGAATGATCTGTTATAAGATTAAATTACTTCTTTTTcaa
gttaagggctctgaccatagtgaatttttcataattgtcgtgtttaaaat
gtgttttatgactgatgtaaccaattaaactatggcatgttatacatttt
ctgtcaAGCTAAATATTcctaaatctgaaaattcaaaaattgcattgaaa
aaatttaacgaagaagaaaatgaaagtatttcaactttgaggagcttatt
ttcggcgaactaacaaatttttgtaaaacctttttttgtctcaaaatctt
gtaaaaagttgtttttgaccaatttttcatcccagcTTTTTGCGCAAAAA
GAGTcgtagaaaatttttccgaaaatttttggATAGTTCAATCTGTTGCA
GACAAttaataaaaaattcgaaacaaaaaggttaattacccattaaaatt
TAGCACTTTTCGTAAAAGAGGGTAAcataacattttattaacgtcctttt
aaggttcataacgtcatttttgtaattaaattgctAATTACTCTTGATAG
AACAAATTCAGTAACAACttataaagacaattttttttgttaaaagtgtc
aaggaactcaaaacaaaagtttcatCTCTAAATCTGCGTAACCGatcttt
tgactatggtcagagccctatTTAACTATTTACCACAAATGAATCCATTC
AAGTAGCGCTAATGTGGTTGTATTTTTCTGTGATTAGTGTTTTTTCTCCG
ATGTTATTATCTATTGTAGCATTAATTCAATTGTTTATTATATTGATTCA
TCACCAATATTTTTTCTTAGAGTACGTGAAAACTTTAGCCAACCAGTAAC
ggtttttaattttgacaagaaataattttggtGAATGATGAAGCAAATAc
aacttttcgaccgtagtcttGCGGTCAGgggcgtgccactttattatcta
attaccccctaaactcgatgcAATCCTTTTTTAcgcctttttctattgtc
tataggtgccaaaaaagactgggacggttttaggaggctaaaacggacaa
aaatgcccgcacggcatttggcggctacggtcgaaaatgtgtattaattt
cttttttgtgcAAAGATGagctttaaaaaaagtaagGGTTGTAGCGTTGT
AGGAAAAGTtaggaagataaaaaaaatttggccTGGAGTTATTTTGACAA
GGCAtcttatttttatctttcaagTCTTTAGATGTTGCCAGAATAAGCAC
CATAATAAAGTAGAGATTTGCACTTTTCAGTAATTTCTAAATCTTATACT
CCGGCaactgcaaattattttttgtaaaattttgtgaatCTTTATATATT
TTAGCCAAGTTATTATAAAATGAATTATTACGAATTTTGTTTGAAATTGG
TTGTTAGGTCCAAATTTGAATAAAGT
Run BLAST on NCBI

protein sequence of TCONS_00018212-protein

>TCONS_00018212-protein ID=TCONS_00018212-protein|Name=TCONS_00018212-protein|organism=Clytia hemisphaerica|type=polypeptide|length=394bp
MAASNPKEIRIMAVGPSGVGKSTIGNRLLNLKSKDSNYLKTSSSTQGVTQ
KPKTINSGHMFYTDVPGIPDPKPENTKEYYDMIIKEAKKECTAIFIIFSV
DMRMDSNTKDRIEDXKECTAIFIIFSVDMRMDSHTKDRIEDCSLLFDEIS
KSSALKILILNDMKAQWPNPDELDENDKNDKKAYLDGKAEHDKERKKGHE
AYEKQIRDTTGIKFNSTVVLYGLSKKYSPDKNMTDVLKNLKETLRKSGIE
PVTSEHLRLFEGLEKLAMKASKDKDYAENLKEDQQKVIKRLEGEYAICKE
RYDSFVGVQQIAEEKGNNKWANVFTLGINWLANKGVEGVGYAAAYFLSLP
MQEKKRELEEAKNKLKSENLQQSVEDYQKMIERFVSFKKVIEGK
Run BLAST on NCBI

transcript from alignment at sc0000291:100715..119594-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018212 ID=TCONS_00018212|Name=TCONS_00018212|organism=Clytia hemisphaerica|type=transcript|length=18880bp|location=Sequence derived from alignment at sc0000291:100715..119594- (Clytia hemisphaerica)
GAACTTTGGTCTAAATGGCAGATCGGTATGCAGAACCACTTTTGGAAAGA
GAATTCCTTAGATAAAATATTATTTTCACAAAAGTTATTTGGCGGAGGAC
GCTTATCAGGTACCCGAGACCAAAACGACTGGCAGCACTCTTTTTTTATA
TTTTTGTGGCGATCTTGCAATTACACACCCCCATAATGCCTTTTGTCAAA
GTTACCCCCGGAAAAAATCAATTTCGTTACCATTTAATATAGAATTTTAT
TGTGCAAAGTAAATAGAGCCTATTACTCATTAGCTTTACAAATGCATACT
AACAACGTCAATAATCACAACCCATATAATGACAAAAGAGGAATTATGAA
CTAAAAAAGAAAAAAATCCATTGGACAAAAATTACTAATCCCATCCTGAT
TGGCTGAAAAAAAAATTATACGCCCTGTTTAAAATGTATATAAAGTGCCC
AAAAACTGAGTAGAGACATCCAACATCCAACATCCAACGAATACAGGGTT
GATCTACCATTGGAGGTATTGTCAGGTAGGATAATTGAAAATAATTTTAT
TACGTCCTTTAGTTCGTCCAAGTGCAATCTAAAAATATATTGGGGATTTT
GGTTAATTCCTCGTTTTCAGCAATTTAAAGTTCGGGAGAAAAAGTCGCTT
TTGGGCAAATTAATAATTTTTTTGGAATATTTCAATTCGGGAAGGATTTA
TAGACTTCCAGGCTATATTCTGAGCCCTATTGGACCATAATATTCAATTG
ACATTGATTGGACCATTCTTGGACTTTTAGTTCCTCAGATCCTAAGGTCC
TAAATCTTAAGTCTAGCGTTAAAACTAGAGTTAAAACTCTACCCGTCCAA
CCTAATTTAGAGCGCTTTCAAATCGTTTGTGGTTGTAAGATTTCGTGGGG
ATTTCCTTTTTTTCTCAAATATTATGACTTTGATTGTGTTATCCTTTAGT
GATGGAAACTTCATTGTTTGAAGCCCTGATTTCTGCTATATAGTTATTTT
CCTCATGAAAATTCTACTTTCTAAGGCTACCTTCTAAGGCTTATAACTTT
CTATGCAAAATTCATTTGATAAATTAATTGTATATATAAAGTTTGAAATT
AGAATGCGCTTCAAAGTAACACTGTACCAAAAGTATTATAGATTTTAACA
CTAAAGGGGTGAAAAGTTGTTTTTTTTCTTCTTCATTTTTGATCTATATT
ATTTTTCTTAGAAATTATTATGCTCTTGAAATTTCTTTTCAACGGTATAT
ATAAAATGTTAGAATTAAAGCATTCGTTGAAAAATGGCATGTACAACGAA
TATTAGTGCAAAAAGTGAATGGCATTAATGACATTAATTGCATTAATGTA
CTCCTCAGCCTTAGCCCTCCAATTTGAAATCAAACCAGTTAAAGTATAGA
CCCTAAATAGCGATATTGAAAATATTCACGTAGGATGAGTGGAATTAATC
AATTTACCGAAAAGCTCCCCAGAAATGTATTCATTAAAACTCTCTAAAGC
TTAACATTTTCGGTTAACAGTCAAACTCAAACACAGCAGTCCCTTAGTCC
GCTTGTTTTCCATGGGGGGGGGGAGGTACTTAGGCAAACATGTGATACCA
GGGGGGTGTTTTTAGACATTTCAAAGGCATTCGATCGGGTGTGGCACGAT
GGCTCACTCTTTAAACTCAAATCTTATGGGGNNNNNNNNNNNNNNNNNNN
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GTAATATGTTTTGTAATATATGTTCGTAGTGTACACGTGTCTTTGTTTCA
ATAAAGAAAAAAGAAAAAAAAAAAAAAAAATATGTGCTGGTGCTAGGTAT
TTGCGTGCCTTAAGGGTCGGTTTTCACTTTCCAAAGTCTCTCTAAAGGTT
GGTTAAAAACACCCTAGTCTTCCTAAGGGTCACCTTTAAATCAGTCAATA
TTTTAGCGTTTTACAATGATACTTTTTGAAATAATTTGTTGTGTTGCTTA
AAAGTTTATTATTCATTTGTTTGAAAAACAATAGAAGAATATGCTTTGAA
TTATGTGAAGTCTCCTCACATCAAGGGTTACTTTTTGGATCGAGTAAGGG
TTAGGTTTTTCTAAAGTGAGTTTCTCTAAGGGTTAGGTTTTTCCATAGTG
AGTCTCTCTAAGGGTTAGGTTTTTCTATAGTGAGTCTGTCTAAGGGTTAG
GTTTTTTAAAATGAGTCTCTCTATGTATGTATGTATGTACAGGGTGTCCC
CATAGTATAAGAAAGCCGCGGCTGGAATGATAACATCTGAATTTCTGTTG
TTCTATCTCTGTCGTATTTGATGAGTATTTGTTGATCAAGAAATCAGTAN
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TCAAAGATATATAGCAATAAAAAAACTTTTTGTGAAGGAAAATAAGAGAA
AAATTTCAAAAACTATCTACCAATAATAAACTGATAACCTTGATGTTCTT
ATAAAGCTCGGAGACATAGATAGAACAGCGATTAACTGAAAAGACAATGC
GGTACATATTCCAGCCGCGGCTTTCTTACACTATGGTGTCCCTAATTAAA
GTATCGAGTCGAAACACAACTATGAGTAGAAAGTTTTATGTGCGTGTTCA
CAAAATTGTATTTTAAGCTCTCCCTCTTTTTTCTTTGTNNNNNNNNNNNN
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NNNNTGTGTGATGGAGAACGTTCTTATATTTTAGCGATAACACACACACA
AACTTTTCTACTCAATCGCATGTTCAAACTCGATACTTTAATTAGGGACA
CCCTGTATGTATGTATGTAATAGTTTATTTCATGTTGACGAAAAGGTAGC
AACAAAGGCTAATAAAAGTCAATGCTACTTTACAATTAAAAAAGACTAAT
GTTTTGTTTGCAGCTCGTCGTCGCTGCTAATGAGGCTAGATATTGACAGC
TTTTGGTTGGCAAAGTTTTTTTTGTTTTTATCAAGTGAAGGTTATCTGTT
CTGGGACTTCCTCTCACACGCCAAATGAAATCACCATCACATTCGGAGTT
CCATTTTTTTAGCTTTTTCGCACATCTCTTTGATTTTTCTTCTTTCATTG
ATGGTGAAATCATCAGTGATGCTTAGATGGTATCCAAGCCACTTCAACTT
TTTTAAGGCTTTAAGGTTGCTCATGATTCTTTCTTTTTCTTCTTCACTTT
GCAAGGTCACCTTTATTGGACGATTTTTCCTCGGCTCATTTTCATGTTCG
AACCCAATACGATGTTGATGCGTTAGTTTGATGTCGCGGATGCCAATATC
TTTGAGCAGATCCTCAATTTCCTTTTTGTCCTCTTCTTGCTCTTCTTCTT
TCGTGTCTTCAACTTGTTCACAGAGTCCATGAATTATGATGTTTTTTCTT
CTTGATTCGATGTCTCGTTTTTCTCTCCTATCCTCTTCTTTTTGTTCCGC
AACAGCAGATTTAACATTTTCCTTGTGTGCTTTGGTTATATCAGCGTACT
CTAAGGTCCCGAATAGTAGGGGGGTCTGAATAAAAGGGGGGGGGTCCGAA
ATTTTTGCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNAGTCGCTCATCTTTTGTGTTAGCATTGTTTCGATGTCG
TTGTTGATGACTTCTCGGTTTTTGGTCAGTTGTTTTTTGAGTTTTTTGAT
TTCGTCGTCTTTTTTAACAATCTGCTCTTGCATCATATGGTACTTGTACT
TGTTTTCTCCGATTTTACTTCTTAAGGATCTCGTTATTCGCACACAATTG
TGACATACATATTGATTATTATACGTGTTAGCGAATATTTGCAGTTGGTA
AAGTGGTAATTGTGTGCACTCGTAATGTACCATACGTTGGCAGCTACGGC
ATTTGAGTCGATTTTGATCTTCATCATCAATACACGTAATTGGTGGGTCT
TGGGTGTTTTTGTCGCGATTTTTGTTCATATTTAGCGAATTTCGATGCTT
CTTTGAGTTTCCACCAGTTTTTTGAAAGCGATGCAGAACACGGAAGGGTT
CGATTTTTCTATAGTGAGTCTCTCTAAGGGTTAGGTTTTTCTATAGTGAG
TCTTTCTAAGGGTTAGGTTTTTCCATAGTGAGTCTCTCTAAGGGTTATAG
GTTTTTCTATAGTGAGTCTCTCTAAGGGTTATAGGTTTTTCTATAGTGAG
TCTGTCTAAGGGTTAGGTTTTTCTATAGTGAGTCTGTCTAAGGGTTAGGT
TCTTCTATAGTGAGTCTGTCTAAGGGTTAGGTTTTTCTATAGTGAGTCTG
TCTAAGGGTTAGGTTTTTCTATAGTGAGTCTCTCTAAGGGTTATAGGTTT
TTCTATAGTGAGTCTGTCTAAGGGTTAGGCTTTTCTAAAGTGAGTCTCTC
TAAGGGTTAGGTTTTTCTAAAGTCTAAGGATTAGGTTCATAGATTTATAA
AGCCCGAAGGGCTAGATGTCGGGGTTTAAGCCATCACAGGCAAAAAAATT
GAATATCGGAAAAATATTGTTGCTATTGTTCTTGAAAACCTGCCAAGCTT
CTGATTTATCAAGCGTTGAAATTATATTGTAATGTCACGTGACTTAGGTA
GGATTTTCTACCTAACCTCGACACACTTTTCAATAAAAGCACTCTATTTA
ACCCTTCGGGCTTTTATAAGTCTATGGTTAGGTTCTTCTATAGTGAGTCT
CTCTAAGGGTTAGGTTTTTCTAAAGTGAGTCTCTCTAAGGGTTATAGGTT
TTTCTATAGTGAGTTTGTCTAAGGGTTAGGTTTTCTATAGTGAGTCTCTC
TAAGGGTTATAGGTTTTTCTATAGTGAGTTTGTCTAAGGGTTAGGTTTTT
CTATAGTGAGTTTGTCTAAGGGTTAGGTTTTTCTATAGTGAGTCTGTCTA
AGGGTTAGGTTTTTCTATAGTGAGTCTCTCTAGGGGTTAGGCTTTTCTAA
AGTGAGTCTCTCTAAGGGTTATAGGTTTTTCTATCGTGAGTTTGTCTAAG
GGTTAGGTTTTTCTATAGTGAGTCTGTCTAAGGGCTAGGTTTTTCTATAG
TGAGTCTGTCTAAGGGTTAGGTTTTTCTAAAGTGAGTTTGTCTAAGGGTT
AGGTTTTTCCATAGTGAGTCTCTCTAAGGGTTATAGGTTTTTCTATAGTG
AGTTTGTCTAAGGGTTAGGTTTTTCTATAGTGAGTCTGTCTAAGGGTTAG
GTTTTTCTATAGAGAGTCTCTCTAAGGGTTATAGGTTTTTCTATAGTGAG
TTTGTCTAAGGGTTAGGTTTTTCTATAGTGAGTCTGTCTAAGGGTTAGGT
TTTTCTATAGTGAGTCTCTCTAAGGGTTAGGCTTTTCTAAAGTGAGTCTC
TCTAAGGGTTATAGGTTTTTCTATAGTGAGTTTGTCTAAGGGCTAGGCTT
TTCTATAGTGAGTCTCTCGAAGGGTTAGGTTTTTCTAGAGTGAGTTTCTC
GTTTTTTATGCCGTAGTGAGTCTCTTTAAGGGTCACCTTTTCAGCAAAAA
TCAGTCTCTCTAAGGGTCATGGTTTGGAGGTCCGACACGCACATACCCAG
CATCCTTCAACCCTAGTACCCCCGGGGGCTCAAGTTAGCTCAAAAGCCTA
TTATCTTCTCGAGGTTTTATATTGTATAAATTCCTGAACAACAGAACTCG
AAAGACCAAAAGAAAAAGTCTCTCAAGAATTTGCTTTTCACATTTGAAAA
TCAAAATATGGAAAACATAAAAAAGTAGGAGCTTTTGACATATCTATAAC
AAAAACTGTGTGTCGATATCTTGCAAGCTGACACATATTTTTCGAAAAAA
AGATTTTTTTGTCAAAAGTCTCTCCAAGAGCCACTTTTTTTTAGCAATTT
AGTCTCTCTCTACAGGGTCTAAAGGGTGTCCGGAAAAAAGGATCGAGTCG
CACCACTTCTTTAGAAAGAAAGTTCTTGTGTGTTTCACTAAATTTGCAAT
GTTTATCAGAGTTCTCTCTGTGTCATATTAATTGTCATGAGACATAGTTT
ATGAATAACTTTTACAAAAAACAATTCTCAATAACTTTAACGTCATGAAA
ATTATAAAGAAAGTTAATTCTTTTTAATCATAATGACAGTTGGAAAAAAA
TTAATTTGTTGGTATATATTTTCTTACATTTTGTTAAACACACGCAACAA
CCTTTTACTCAGAATCATGTTCGAACTTGATACTTTTTTTCCGGACACCC
TGTAGGGGCCAGGTTCGGGGGAGGGGGACAAACGCGGATATCCCAAGGGT
ATGTAGTGGAAATAATTGATGATATCTTATCAATTTTCATTTATTCGTTT
TTGTTTACAAATCTGTAATGTCTGTAATGAAAATTCTCGATTTCATTTTT
GGCATTCAATGGTTGAAACTTATAGCGTTAATTGCTTTTTTTTGTTGATT
TTTTTCAATATCGGATTTTTTATGACTATTTTTGCTTTACACTTTTTGAA
ATTCTACTGCAAGTCTTACATATCAAATAAGTCAAAAAGAATCTTTTCCA
CGCTTTTTTCTCCATATAATTTGAACTTTAATTAAGATGAAACTATTAAT
TAATCAAACTCTAAACTAAAAGACACTCCACTAAGTATTCGTCATTCCAT
TACTTGAAAAAGGTTTGTTTTTTATGTATATCTGAATCCTCCTGTAAGTT
TTTCGCTCTCCTATTCCATTTGCAGCGTGTAAATAAGCCGTTAAAAAAGT
GCAGCATTGTATTGGTTATCGATCTTGACTGCCGTTCAGGAAGTCGGGGC
TCGATTCTCACTCGGTGTTTAGATTCAGTTGGCAAGAGAATGTACCTTCA
TTTTCACAGGCCAACCCTTCCGTGTGAGGAGAATTGGGTAGATAGAAACT
CAAGAAACCTGTCGGTGACTGTGCCAGGTATCGATTCCACAGTACATCGT
GGATGAGGTGAGAGTGCGCTGGCCTTGTTCCTTAGTGAGTGGTTCACGCC
GGATTAACGCACTTGATCTGAAAAACTGTGTGTCGATATCTGGCAAGCTG
ACAGACAGTAGAAACTACAGCGTAATACAGTTCTAACGAGACGACTTCTA
GACCGCTCAATACAGAACCGGGTATCCTCTGTAAGGAGAATCCAGACACT
AGGGACCTTTAGCATCTAAGACGGCGACTTGAAGTGGGATGTGAAGTAAA
TCTTAAAATCAAATGGCAAATTTTATCCGATTTTAGCTAGATTTAATATC
ACATGGAAAAATTTGAAATGCAGTCAAGTTTTTATAAAAAATTACGTTAT
GATTCTCGAGGGATTTATTCATTTAAAACTATTGTACTCTTCCTTTACCG
TATTTGTTCTAAACACGACGTCACAAAAGAATTTTGAAGTCGTCTTGAGA
TTTGAAAACGTCTATTAATGGTATTCTCATGAGAAAATAAATATGAAAAG
AATTGAATCTAGCTGCGATCCAGATATCAATTCCTTAGGGCTTTCTTTTT
GTTCAATCTTGCCGTACTTTTTCCAATCTGCCGTTCTAGATGCTAAAGGT
CCCTACTATCATCATCAAGACGGATTTAAATTCCGAAATTTTAGATTCAA
ATTTAAGGGCTCTGACCAGAGTCAATAAATTCGTTATGGGATTTGTTGAT
AAAACTATTTTTGGGTTCCTTGACACTTTTAATAAAAAATTGCTGTTACA
AGTTGTTTGAAAACTTATTCAAGAGTAATTAAGAATTTAATTACAAAAAT
GACATTATGGTCGTGTTCAGACATGAAAGTTTAAGTTTAAGGCTTAAGTA
GTACTAAGTTGATATGGGAATTAAGAAATGCAACGACTTAATTGCTATTT
CATCTTTTAGATAGATTACATAAGAGAGGAAAAAGGAATCCCCTTTTGAA
TGTTTGAGTAAGGCTTAGTTTTTGATAGAGGAGATCGCAAACAGTTATTT
CCGACGCCAAGAGAGACTTTGAAAGGTGAAAAACCCGACCCTTACCGTCC
GCACATATCCCCCGGGGGCAAAGGCAAATGGGTTTCAATTAAGGGCTCTG
ACCATATTTGCCATCTACAAAATATAGACTTCTGTCTGATATAACGAACA
AAACTATGGCATGTTATATATTTTCTGTTAGGCCAATTATTCCTGAAACT
GAAAATTTAAAAATGGCAATGAAAGAATTTGATAAAGAAGAAAATGAAGA
CTTTAGAATTTTGAAGCCTTCTGACTTCCTCAAAATAGTTTTACTCGTAA
AATTTTTGCATCGAAGGTTACAACTTGTATAGGAACTAGCACTTCGAAAG
ACCCTATTTTTCTGTTGTTTTTTACTCAATGGACTAAGAGGCTACAACTT
TTGGACACAATCATTTTAGGTAAAAAATAGTTGTATGATTGAAATCAGCA
GGGATTTGTAATAGCGTAGCTGGATTTTACATTAAAAAAAAGCCTTGTTC
TATCTCTGTACCCTGACATTAAAATTTGATATGAAATTTAACTTTTTAAT
TACAAACTCGTGCAATTTTGATTTCCTCTTTGCCAATGATTCTGCTGCTG
CATTTATCTTTCACGATTAAAAACTTTTAATTATCAAGAACATTGGTGAA
TGACAATTTAAAAAAGTGATTGTTTTCATTAGTAAAGTCAGTACCGTAGG
AAGCATTTTCATATTGGGGGGGGGGCTGAAGTTTAGTGACGCCGCGAGGG
CCAACGATGGTTTGGTCCGAGGGGGGNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTGGGG
GGGGGGGGGCTGAAGTTTAGTGACGCCGCGAGGGCCAACGATGGTTTGGC
CCGAGGGGGGAAATTTTGAAAATTTGAGCTCTAGATTGCTTGAAAATGCA
CTCAAAACATGCACTTAAAAGACAACTACGACAAATTAAAAAAGAAAAAC
TTTGCATTTTGCAAAATAACCATTTTTGAAAAAATCATTGGGGGGGGCAT
AGCCCCTCCCCCTTGCCCCCCAGTTGCTACGGCACTGAAAGTTATAAGAA
ATTTTTTCTGAAAGATTATAAATAGCACTTTTTCATTTAAAATACCGCGC
TACACCGCGAGGTACCTCACTTTCTAACTGATATTTTCAGATAGCGAGTC
GGTATATCTGATTATGGAAAAAATTTCATTTCAATTGAAACAATCTTTGT
CAAAATATTTACATCCGAAATTTTTAAAGAGAAATCATGAAAGCTTCTCA
AATTCATAACACATGCTTAGATTTCATTTACAAGTAAGCTTTTGGGTGAT
CTTCTGCAAATATTATTTTGATGAAAAGCGGGAACATCATAGCAAAAGGT
GCAGACGTACTGCATGAATACTTTGTCTGCTTTATTATTTTTCTTATAAA
AACAAAACACTCAAGAGATGGATTTCTATTATGAACAGTTTACAATAGAA
AAGACAAAAAAGAAATCCGCAAAGGAATTCTCATCCTTCATCCAGCTCCG
CTATTACATATCCCTGAAATCAGGAAGCATTAAATATTAGTTAATATACC
AAAAAGTAAGTTAATTCTTTTGCTTCTTGTTTGGGAAAAAACGAGGTTGC
TGATTCCACTCTAGACCTTTTGTCTAACATAAAAGGTGTTACATGATTCT
ATTAGTATTTCTGGATAAATAGGAAGGAATGATGGCTACAAGTAGTAAAT
TATCTAACCTAGTTAATTCATCTATCTAGCTACATCATCGATGGCTGCAT
CAAATCCAAAAGAAATTCGTATTATGGCTGTGGGGCCTTCAGGTGTCGGG
AAATCAACAATAGGAAATCGTCTTTTGAATTTGAAGAGCAAAGATTCGAA
TTATCTAAAAACCAGTTCATCTACCCAAGGAGTTACTCAGAAACCAAAAA
CCATCAACTCAGGGCATATGTTCTACACTGATGTCCCGGGAATTCCAGAC
CCAAAACCGGAAAATACAAAAGAGTACTATGATATGATCATAAAAGAAGC
TAAAAAGGAATGTACCGCAATTTTCATTATTTTTTCTGTTGATATGAGAA
TGGATAGTAATACCAAAGACCGAATCGAAGATTNAAAGGAATGTACCGCA
ATTTTCATTATTTTTTCTGTTGATATGAGAATGGATAGCCATACCAAAGA
CCGAATCGAAGATTGCTCTCTGTTGTTTGATGAAATCAGTAAAAGCTCAG
CCCTTAAGATTCTAATCTTGAATGATATGAAAGCGCAATGGCCAAACCCA
GACGAACTGGATGAGAATGATAAAAATGACAAAAAAGCTTATTTGGACGG
GAAGGCAGAACATGACAAAGAGCGCAAAAAAGGCCATGAAGCCTATGAGA
AGCAGATCAGAGATACGACTGGTATCAAATTCAATTCAACTGTTGTGTTA
TACGGTTTGAGTAAGAAATACAGTCCTGACAAAAATATGACAGATGTACT
AAAGAATTTGAAGGAAACTCTTAGAAAGTCTGGTATTGAGCCTGTGACGT
CTGAACACCTTCGCCTTTTCGAGGGATTGGAAAAGTTGGCGATGAAAGCA
AGCAAGGATAAAGATTATGCAGAAAATTTAAAGGAAGATCAACAAAAGGT
TATCAAAAGATTAGAAGGGGAATATGCAATATGCAAAGAGCGATATGATA
GTTTTGTTGGAGTTCAACAAATTGCAGAAGAAAAAGGCAATAATAAGTGG
GCAAATGTGTTCACACTGGGTATAAACTGGCTTGCCAACAAAGGAGTTGA
AGGTGTGGGGTACGCTGCTGCTTACTTCCTGAGTTTGCCAATGCAAGAAA
AAAAAAGAGAGCTGGAAGAAGCTAAAAATAAGCTTAAAAGTGAAAATCTA
CAGCAATCGGTAGAAGACTATCAAAAGATGATAGAAAGATTTGTAAGCTT
CAAAAAAGTTATTGAAGGAAAATAAGATATAAACTAACCCGCTGTAATTT
TCAATTTAAACAATGCGCATTTTCTTTTAAATTTATAAGCTTTTCCACCA
TAAAATACAGATAGTTTTTATAATCTCCGAGCAGATTCTGATACTCCGCG
CATAGCACGTAATCAATCTAACGGTAAGTCCGGTAAGAGAACCAGTCCGC
TTTGATCTTTCTCATCCACACTTGCGATGAATATTAAATGAGCTTTTAAG
TCCACTGATTGCCTAATGCAAAATAATCGCACCGAAATCACTTGTCAATC
ATATATTCAAACAATACATAAACAATGGAACCAAGTCGCTTTCGTTTTCA
TGTTCAAGCAGGTCAAATCATCACATTCGCCATATCCTTTAGAACAGAGC
GTGGTTTGTGCGGAGTGAATGATCTGTTATAAGATTAAATTACTTCTTTT
TCAAGTTAAGGGCTCTGACCATAGTGAATTTTTCATAATTGTCGTGTTTA
AAATGTGTTTTATGACTGATGTAACCAATTAAACTATGGCATGTTATACA
TTTTCTGTCAAGCTAAATATTCCTAAATCTGAAAATTCAAAAATTGCATT
GAAAAAATTTAACGAAGAAGAAAATGAAAGTATTTCAACTTTGAGGAGCT
TATTTTCGGCGAACTAACAAATTTTTGTAAAACCTTTTTTTGTCTCAAAA
TCTTGTAAAAAGTTGTTTTTGACCAATTTTTCATCCCAGCTTTTTGCGCA
AAAAGAGTCGTAGAAAATTTTTCCGAAAATTTTTGGATAGTTCAATCTGT
TGCAGACAATTAATAAAAAATTCGAAACAAAAAGGTTAATTACCCATTAA
AATTTAGCACTTTTCGTAAAAGAGGGTAACATAACATTTTATTAACGTCC
TTTTAAGGTTCATAACGTCATTTTTGTAATTAAATTGCTAATTACTCTTG
ATAGAACAAATTCAGTAACAACTTATAAAGACAATTTTTTTTGTTAAAAG
TGTCAAGGAACTCAAAACAAAAGTTTCATCTCTAAATCTGCGTAACCGAT
CTTTTGACTATGGTCAGAGCCCTATTTAACTATTTACCACAAATGAATCC
ATTCAAGTAGCGCTAATGTGGTTGTATTTTTCTGTGATTAGTGTTTTTTC
TCCGATGTTATTATCTATTGTAGCATTAATTCAATTGTTTATTATATTGA
TTCATCACCAATATTTTTTCTTAGAGTACGTGAAAACTTTAGCCAACCAG
TAACGGTTTTTAATTTTGACAAGAAATAATTTTGGTGAATGATGAAGCAA
ATACAACTTTTCGACCGTAGTCTTGCGGTCAGGGGCGTGCCACTTTATTA
TCTAATTACCCCCTAAACTCGATGCAATCCTTTTTTACGCCTTTTTCTAT
TGTCTATAGGTGCCAAAAAAGACTGGGACGGTTTTAGGAGGCTAAAACGG
ACAAAAATGCCCGCACGGCATTTGGCGGCTACGGTCGAAAATGTGTATTA
ATTTCTTTTTTGTGCAAAGATGAGCTTTAAAAAAAGTAAGGGTTGTAGCG
TTGTAGGAAAAGTTAGGAAGATAAAAAAAATTTGGCCTGGAGTTATTTTG
ACAAGGCATCTTATTTTTATCTTTCAAGTCTTTAGATGTTGCCAGAATAA
GCACCATAATAAAGTAGAGATTTGCACTTTTCAGTAATTTCTAAATCTTA
TACTCCGGCAACTGCAAATTATTTTTTGTAAAATTTTGTGAATCTTTATA
TATTTTAGCCAAGTTATTATAAAATGAATTATTACGAATTTTGTTTGAAA
TTGGTTGTTAGGTCCAAATTTGAATAAAGT

Coding sequence (CDS) from alignment at sc0000291:100715..119594-

>TCONS_00018212 ID=TCONS_00018212|Name=TCONS_00018212|organism=Clytia hemisphaerica|type=CDS|length=1185bp|location=Sequence derived from alignment at sc0000291:100715..119594- (Clytia hemisphaerica)
ATGGCTGCATCAAATCCAAAAGAAATTCGTATTATGGCTGTGGGGCCTTC
AGGTGTCGGGAAATCAACAATAGGAAATCGTCTTTTGAATTTGAAGAGCA
AAGATTCGAATTATCTAAAAACCAGTTCATCTACCCAAGGAGTTACTCAG
AAACCAAAAACCATCAACTCAGGGCATATGTTCTACACTGATGTCCCGGG
AATTCCAGACCCAAAACCGGAAAATACAAAAGAGTACTATGATATGATCA
TAAAAGAAGCTAAAAAGGAATGTACCGCAATTTTCATTATTTTTTCTGTT
GATATGAGAATGGATAGTAATACCAAAGACCGAATCGAAGATTNAAAGGA
ATGTACCGCAATTTTCATTATTTTTTCTGTTGATATGAGAATGGATAGCC
ATACCAAAGACCGAATCGAAGATTGCTCTCTGTTGTTTGATGAAATCAGT
AAAAGCTCAGCCCTTAAGATTCTAATCTTGAATGATATGAAAGCGCAATG
GCCAAACCCAGACGAACTGGATGAGAATGATAAAAATGACAAAAAAGCTT
ATTTGGACGGGAAGGCAGAACATGACAAAGAGCGCAAAAAAGGCCATGAA
GCCTATGAGAAGCAGATCAGAGATACGACTGGTATCAAATTCAATTCAAC
TGTTGTGTTATACGGTTTGAGTAAGAAATACAGTCCTGACAAAAATATGA
CAGATGTACTAAAGAATTTGAAGGAAACTCTTAGAAAGTCTGGTATTGAG
CCTGTGACGTCTGAACACCTTCGCCTTTTCGAGGGATTGGAAAAGTTGGC
GATGAAAGCAAGCAAGGATAAAGATTATGCAGAAAATTTAAAGGAAGATC
AACAAAAGGTTATCAAAAGATTAGAAGGGGAATATGCAATATGCAAAGAG
CGATATGATAGTTTTGTTGGAGTTCAACAAATTGCAGAAGAAAAAGGCAA
TAATAAGTGGGCAAATGTGTTCACACTGGGTATAAACTGGCTTGCCAACA
AAGGAGTTGAAGGTGTGGGGTACGCTGCTGCTTACTTCCTGAGTTTGCCA
ATGCAAGAAAAAAAAAGAGAGCTGGAAGAAGCTAAAAATAAGCTTAAAAG
TGAAAATCTACAGCAATCGGTAGAAGACTATCAAAAGATGATAGAAAGAT
TTGTAAGCTTCAAAAAAGTTATTGAAGGAAAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010237XLOC_010237Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018212-proteinTCONS_00018212-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018212-exon-sc0000291-1575043694:119070..119594TCONS_00018212-exon-sc0000291-1575043694:119070..119594Clytia hemisphaericaexon
TCONS_00018212-exon-sc0000291-1575043694:100715..103715TCONS_00018212-exon-sc0000291-1575043694:100715..103715Clytia hemisphaericaexon
TCONS_00018212-exon-sc0000291-1510915933:119070..119594TCONS_00018212-exon-sc0000291-1510915933:119070..119594Clytia hemisphaericaexon
TCONS_00018212-exon-sc0000291-1510915933:100715..103715TCONS_00018212-exon-sc0000291-1510915933:100715..103715Clytia hemisphaericaexon
TCONS_00018212-exon-sc0000291-1491911889:119070..119594TCONS_00018212-exon-sc0000291-1491911889:119070..119594Clytia hemisphaericaexon
TCONS_00018212-exon-sc0000291-1491911889:100715..103715TCONS_00018212-exon-sc0000291-1491911889:100715..103715Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000291supercontigsc0000291:100715..119594 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0428128	0	0.0269866	0	0	0	0	0	0	0	0	7.92175	10.2767	0	0.111838	0.0181327	0	37.0674	39.1626	0.0751222	0	0	0	0	0	0	0	0.106156	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR006073GTP_binding_domain
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005525 GTP binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00018212 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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