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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018200 ID=TCONS_00018200|Name=TCONS_00018200|organism=Clytia hemisphaerica|type=transcript|length=652bp
NNTTTTTGGTGTTGGTGCCATTACTTGGGATACCATTTATATTTGCACCC
TTTGTTGAATACAGCATTTATATCGCTTACACTTTCGTCATCATGAATGG
ACTAACGGGTTTCTACTTATTAGTCGGGCATGTTATTCTAGACTCGATGG
TGGTGGACGAAATCAAGAAAAATCTGGCTCTTCGCAGGAACAGATCCTCT
AATGAAAGCTCAAGTCAAAAGTCTCGACAAAGTAGTACCAAAACTTCATC
TTCATAAAAAATGGAAACCGAAGAAATATTATTTAACGTATATGGGTTaa
attttaacttaaatttAAAGTATAATTCGGCCTTTAGATTGATCAATAAA
TTATGTCTATTTACATCAACCTGTATTAATAATAGCATATCGCTTTGCTG
ATAGATAACTATCGTGATTGGAACAATATCTATTGAAGCATTCTTCTGAA
CTGAATTTTTGTGAGAAAAAGATCCTTCAATTTTCCACCGCTGTGGAATa
atgacaaaatattttgatgtatTTCAAAACGATCTACATACCGCTTTAGT
ATAAACGAAAGCAACCACCGAGGGgttcttcaaaatatctgttctaaaGG
CATGTTCCAGCTGAAAAGAGCGATCTGTTCTAAGAAAAATGGGAAAGTTG
TC Run BLAST on NCBI transcript from alignment at sc0000291:269739..271205+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018200 ID=TCONS_00018200|Name=TCONS_00018200|organism=Clytia hemisphaerica|type=transcript|length=1467bp|location=Sequence derived from alignment at sc0000291:269739..271205+ (Clytia hemisphaerica)
NNTTTTTGGTGTTGGTGCCATTACTTGGGATACCATTTATATTTGCACCC
TTTGTTGAATACAGCATTTATATCGCTTACACTTTCGTCATCATGAATGG
ACTAACGGTATGtggaaatttctcaatttttcatctgcATTTAAATGTAA
TTTTGAAGAATAAAGTCGTCTAGAATCCATGTAATGCAGTAAtataggtg
ttatatgataataccaTCATAATACTAAGATTTGCTCCTTCCACTTCGTT
TTCTTATTATGGTCTGAAGAAATCATCTACAATCGAGGTCATAATAgatg
agaaaaaagggaaattcactgggaagttttgaaaccacaatcaatttgta
agtgctctaaagtaggttcgaagggtagagctttaactctgagttttaat
gcTGAGACTAAAAGatccaaagttcaaaaatagtccaataaggctcagaa
tatagcctggaagtctgccaaccacTCACAAATCGAgatattcgattaag
ttaaagagatagtccaaaatcgactttcccgccggaactttaaatcttga
aaaacgttaaaataaccgaaaTTCTCAAtctatttcaaccatgattgtag
catgCTAGACTAATAATTTTGTAACCACAGACTAATCACAGACTAACTTT
GTAAACACAGGCTAAAGGGAACAACttgaatttcaaattctttAGTATGT
TTCGGAAAATAATTGAACGCATTTGCACTCCATTGCTCTGCTCTTATGGT
CACTAAGTTTGGGCTGTGAAAGGCGACGAAGATTTTTTTCCGTCAACGGA
CGAACGGCAAAACGGGCAAATACCTGAAACAACGGCCGAATACTTACGAC
ATGATTTcgaataaattatgtaagtagtTGAATAGAAgtcggaaaaaagt
ttttctatcTTCTACTTTTTAGGGTTTCTACTTATTAGTCGGGCATGTTA
TTCTAGACTCGATGGTGGTGGACGAAATCAAGAAAAATCTGGCTCTTCGC
AGGAACAGATCCTCTAATGAAAGCTCAAGTCAAAAGTCTCGACAAAGTAG
TACCAAAACTTCATCTTCATAAAAAATGGAAACCGAAGAAATATTATTTA
ACGTATATGGGTTaaattttaacttaaatttAAAGTATAATTCGGCCTTT
AGATTGATCAATAAATTATGTCTATTTACATCAACCTGTATTAATAATAG
CATATCGCTTTGCTGATAGATAACTATCGTGATTGGAACAATATCTATTG
AAGCATTCTTCTGAACTGAATTTTTGTGAGAAAAAGATCCTTCAATTTTC
CACCGCTGTGGAATaatgacaaaatattttgatgtatTTCAAAACGATCT
ACATACCGCTTTAGTATAAACGAAAGCAACCACCGAGGGgttcttcaaaa
tatctgttctaaaGGCATGTTCCAGCTGAAAAGAGCGATCTGTTCTAAGA
AAAATGGGAAAGTTGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018200-exon-sc0000291-1491911889:269739..269845 | TCONS_00018200-exon-sc0000291-1491911889:269739..269845 | Clytia hemisphaerica | exon |
| TCONS_00018200-exon-sc0000291-1510915933:269739..269845 | TCONS_00018200-exon-sc0000291-1510915933:269739..269845 | Clytia hemisphaerica | exon |
| TCONS_00018200-exon-sc0000291-1575043694:269739..269845 | TCONS_00018200-exon-sc0000291-1575043694:269739..269845 | Clytia hemisphaerica | exon |
| TCONS_00018200-exon-sc0000291-1491911889:270661..271205 | TCONS_00018200-exon-sc0000291-1491911889:270661..271205 | Clytia hemisphaerica | exon |
| TCONS_00018200-exon-sc0000291-1510915933:270661..271205 | TCONS_00018200-exon-sc0000291-1510915933:270661..271205 | Clytia hemisphaerica | exon |
| TCONS_00018200-exon-sc0000291-1575043694:270661..271205 | TCONS_00018200-exon-sc0000291-1575043694:270661..271205 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000291 | supercontig | sc0000291:269739..271205 + |
Blast
The following BLAST results are available for this feature:
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