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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018166 ID=TCONS_00018166|Name=TCONS_00018166|organism=Clytia hemisphaerica|type=transcript|length=1353bp
TTGCATCAATTGGACGATCACCATGGACAAGCACCTATGTCCAAATCGTT
TTGATGCTGAAAACAATGGAACACTGGtacagaaaatttgaaaactttat
aaattcTATAACTTTTCCGGACGGAACAACTGATCAAGCAGGTCAAGAAC
AAAAACTCTTATCAAATACGTTTAACCATCACTGTATAAATTTATTGCTG
AAGCAGAAAACTACACCAGAGTGATAGAAATTCTTCGTCAACTTTACGTT
AAGCCGGTCAATGTTATGTATAACCGTCATTACTGTTCTTGTCACCCATC
GCCAAAATGATACAGAAACAGTCGACCAGTACCTTCAAGAACTTGAGAGA
CTTAGTAAGAACTGTAACTTTGCTGTTGTAACAGCAGAGAATTACCGTCA
AGAATAAATGACTTACGTTCTCATGTTTTTCGGCAGCGTTTACTGGAAAA
TCCTATAGTAACCTTTTAACAAGCCTTCCACGAGCACGTACATTAGAGCT
CGCACAAAAACATTctgataattttcaatttttaccaaACATTGTTGCTG
CTGTCGCTGGCAGCTCAATGGATATTCAACCTGATGCTACAATTGCTGGA
ACTGGAAAAGGGAGCACTTCAGGAACTGAGAAACAAAAGTGCAATTTCTG
TAGTAATGACCGTTATCCTCGCAGCAAATGCCCTGCAAAAGAAAGTACGT
GCAATATGTGTTCGAAAATTGGACATGATTGAGAGAGAGTTTTTTGTTCA
ACCAAGACTAGTGCCAACCTAGGAGCCGCAGCATTGCCATCTTTTTTAAA
CCCATCACTTTGTGCTACTCAACAAAACAAAGCCTCAAATAGTATTGATT
CAACCATGACCATTACCTATGTCCATAATCGATCTTTGAATAAGCTTGTT
GATTCAGAAAGAAGAAGTAAGAATACAATAataatatttcaccctcaatt
tttggcaatttcttaagaataattGACCCTCAGCTAaggtacactattct
tataaaaaagtgtgcagCGTTCTTCATGCGTCTGCATGCCAGCTTTCAAT
GCCAGTCTATCTCATTTTGAACTTTCAGTTCCAGAGTGCCTTTAGGATGT
CCCCTTCAGGTCCTAACTTTGAGCTGGTTAATAACTCTGGAACTAATAGA
TAGCTACcattggaaagagcatgaaaaactttgagaaaaataCGCTGGAT
TTGAGGCACCCCCTCTTCAGCAAAGACGCCactttgaaaattgtgaattt
ttttcaaagactGTAAAGCTCTGGGAATGGAAGGGTTATTTAAAAGTGTC
GCTTTTGCATAGAGAAGtttgctttattggaagaaccCATCCCCAAGTCG
AAC Run BLAST on NCBI transcript from alignment at sc0000290:29603..30955 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018166 ID=TCONS_00018166|Name=TCONS_00018166|organism=Clytia hemisphaerica|type=transcript|length=1353bp|location=Sequence derived from alignment at sc0000290:29603..30955 (Clytia hemisphaerica)
GTTCGACTTGGGGATGggttcttccaataaagcaaaCTTCTCTATGCAAA
AGCGACACTTTTAAATAACCCTTCCATTCCCAGAGCTTTACagtctttga
aaaaaattcacaattttcaaagtGGCGTCTTTGCTGAAGAGGGGGTGCCT
CAAATCCAGCGtatttttctcaaagtttttcatgctctttccaatgGTAG
CTATCTATTAGTTCCAGAGTTATTAACCAGCTCAAAGTTAGGACCTGAAG
GGGACATCCTAAAGGCACTCTGGAACTGAAAGTTCAAAATGAGATAGACT
GGCATTGAAAGCTGGCATGCAGACGCATGAAGAACGctgcacactttttt
ataagaatagtgtacctTAGCTGAGGGTCaattattcttaagaaattgcc
aaaaattgagggtgaaatattatTATTGTATTCTTACTTCTTCTTTCTGA
ATCAACAAGCTTATTCAAAGATCGATTATGGACATAGGTAATGGTCATGG
TTGAATCAATACTATTTGAGGCTTTGTTTTGTTGAGTAGCACAAAGTGAT
GGGTTTAAAAAAGATGGCAATGCTGCGGCTCCTAGGTTGGCACTAGTCTT
GGTTGAACAAAAAACTCTCTCTCAATCATGTCCAATTTTCGAACACATAT
TGCACGTACTTTCTTTTGCAGGGCATTTGCTGCGAGGATAACGGTCATTA
CTACAGAAATTGCACTTTTGTTTCTCAGTTCCTGAAGTGCTCCCTTTTCC
AGTTCCAGCAATTGTAGCATCAGGTTGAATATCCATTGAGCTGCCAGCGA
CAGCAGCAACAATGTttggtaaaaattgaaaattatcagAATGTTTTTGT
GCGAGCTCTAATGTACGTGCTCGTGGAAGGCTTGTTAAAAGGTTACTATA
GGATTTTCCAGTAAACGCTGCCGAAAAACATGAGAACGTAAGTCATTTAT
TCTTGACGGTAATTCTCTGCTGTTACAACAGCAAAGTTACAGTTCTTACT
AAGTCTCTCAAGTTCTTGAAGGTACTGGTCGACTGTTTCTGTATCATTTT
GGCGATGGGTGACAAGAACAGTAATGACGGTTATACATAACATTGACCGG
CTTAACGTAAAGTTGACGAAGAATTTCTATCACTCTGGTGTAGTTTTCTG
CTTCAGCAATAAATTTATACAGTGATGGTTAAACGTATTTGATAAGAGTT
TTTGTTCTTGACCTGCTTGATCAGTTGTTCCGTCCGGAAAAGTTATAgaa
tttataaagttttcaaattttctgtaCCAGTGTTCCATTGTTTTCAGCAT
CAAAACGATTTGGACATAGGTGCTTGTCCATGGTGATCGTCCAATTGATG
CAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018166-exon-sc0000290-1491911889:29603..30955 | TCONS_00018166-exon-sc0000290-1491911889:29603..30955 | Clytia hemisphaerica | exon |
| TCONS_00018166-exon-sc0000290-1510915933:29603..30955 | TCONS_00018166-exon-sc0000290-1510915933:29603..30955 | Clytia hemisphaerica | exon |
| TCONS_00018166-exon-sc0000290-1575043694:29603..30955 | TCONS_00018166-exon-sc0000290-1575043694:29603..30955 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000290 | supercontig | sc0000290:29603..30955 . |
Blast
The following BLAST results are available for this feature:
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