TCONS_00018100 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018100
Unique NameTCONS_00018100
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1240

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018100 ID=TCONS_00018100|Name=TCONS_00018100|organism=Clytia hemisphaerica|type=transcript|length=1240bp
TTGTTCGATCACGAATTCACGCGACAATTCAAAAAGCTAGAAGTGAATAT
CAGCAAAGTGATTTTGGAAGATGAAGATGACGAGGACGGTAGCAATTCTA
AAGAATCGAACAGTGCGCTTATCGTGCAATATAAAACAATGATTAGAGAG
CAGGACGACAGACTTCGAGCTGCAAATACATCATATAAACAACTACACGA
TTCTTTTCAAATCTCGCAACGTGACTTGGAACGTCAAGCAATTGAACTTG
TACAGTTACGTAATCAAGTCGGCATCATGAAAGAACAAAGTCCAGTGAAC
ACGCCGACAGACCAATTGGAACGGTTTCAAGCGCAAGTCACTTCGTTACA
AGAACAATTGAAAGAACGCGATCAAACCATACAAGACTTGCAAGCAAAAG
AGCTTTCATCGACCAACCTCAACGGAGAAGTGCACAGTGAGAGCGGATAC
AATTCACAAGACCTCGAATCTCCCTCCTCCGTGGAGAGCGAAACACTTCT
TCTACAAGTGGAAAGCCTCAAAGAACAAAATATTAACCTGACACAAGAGC
TCGAAAAAACGAAAGCCAGTTTAACAGTTACTCAAGCCTCTCTTGAAGTC
ATTactacaaataaaatggaagaaaGCGAAACAAATCGGTTATCACAAGA
AGAAATAGAGGAACTTCAATCGTTACGTTTAAAAGTTACTTCAATGCAAA
CAGAAAATACACGTCTCAAGGAGCAAGTTCGGACGCCAGAGAAAAATTTG
GAACACATCTCGCAATTAGAACAAGAGGTTGAATTAAAGAATATCGAACA
AACACAACAACGACAGGACTATGAAGATCTTTTGGTTTTGTTGGAAGATC
AagattccaaaatcaagaaatttaaaACTCGACTACGTGAATTGGGTGAA
GTTGTTCCAAGTGATTCTGCTGACGATGATTCTGCCGAGGAAGATTAATA
TACTTCCCTGATTGGTCCATTTGATGCAAAGATCTTCTCTGATTGGTCCA
TTTGATACAAAGATCTTCTCTGATTGGTCCTTTTGATGCAAAGATCTTCC
CTGATTGGTCCCTTTGATACAATGTCACTCCCTGATTGGTTACTTTGATG
CAAAGATTCTCTACGATTGGTCCCTTTATGATGCAAATACACTCTCTGAT
TGGTTCAGTCCAAATGGGGGGATTGGCTCGTcttatttgtttcattttgt
acaaagacatttttaaatttggtcTTTTGATCAATTGATA
Run BLAST on NCBI

protein sequence of TCONS_00018100-protein

>TCONS_00018100-protein ID=TCONS_00018100-protein|Name=TCONS_00018100-protein|organism=Clytia hemisphaerica|type=polypeptide|length=315bp
LFDHEFTRQFKKLEVNISKVILEDEDDEDGSNSKESNSALIVQYKTMIRE
QDDRLRAANTSYKQLHDSFQISQRDLERQAIELVQLRNQVGIMKEQSPVN
TPTDQLERFQAQVTSLQEQLKERDQTIQDLQAKELSSTNLNGEVHSESGY
NSQDLESPSSVESETLLLQVESLKEQNINLTQELEKTKASLTVTQASLEV
ITTNKMEESETNRLSQEEIEELQSLRLKVTSMQTENTRLKEQVRTPEKNL
EHISQLEQEVELKNIEQTQQRQDYEDLLVLLEDQDSKIKKFKTRLRELGE
VVPSDSADDDSAEED
Run BLAST on NCBI

transcript from alignment at sc0000287:190328..196499-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018100 ID=TCONS_00018100|Name=TCONS_00018100|organism=Clytia hemisphaerica|type=transcript|length=6172bp|location=Sequence derived from alignment at sc0000287:190328..196499- (Clytia hemisphaerica)
TTGTTCGATCACGAATTCACGCGACAATTCAAAAAGCTAGAAGGTATGAA
AGACGCATCCTCTTTTTTCCTTGCTAATGCATTCATCCTGAATGGTATGT
TATTTTACAGGAGCCCCCATATCTCCTTAAGTCGAAAAGGTTTGCCGGTC
CCTTCAGCAAACAAACATTTATTATAAATTTCCCTAATTCGAACAAATTT
GCATTCCCCGGGCATGTCACGGAGCCTCCACTGTATAACATTTTGTGTAT
AGAACCAGTACTGATAGAAACTATACTCCTCTGAACCTTAGAAAACACTA
ATTAATACATTCATCTGGTTTCAACTTTCAGTGAAAATCAGCAAAATGAT
TTTCTAGAAATTCTTTTCATACATAGAAACCATGCCCTCTAAACATTAGA
AAACACCACTAAGACAATTTCACCTGGTTTCAACTTTCAGTGAAAATCAG
CAAAGTGATTTTCTAGAAATTCTTTTCACACATAGAAACCATACCCTTTA
AGCCTGAGAAAAATACTTCTAAAACACCTCACCTGGTTTCCACTTTCAGT
GAATATAAGCAAAGTGATTTTCTAGAATATCTTTTCACACATAGAAACCA
TGCCCTCTAAACATTAGAAAACACTTCTAAAACAATTTCACCTGGTCTCA
ACTTTCATTGAGCATCAGCAAAGTAATTTTCTAGAAATTCTTAACAGATA
TAGAAACCATGCCACTAAACATTAGAAAACACTACTAAAACAATTTCACC
TGGTTTCCACTTTCAGTGAACATTAGCAAAGTGATTTTCTAGAAATTCTT
TTCACACATATAAACCATACCCTTTAAGTCTGAGAAAAATACTTCTAAAA
CACCTTCACTGGTTTCCACTTTCAGTGAATATCAGCAAAGTGATTTTGGA
AGATGAAGATGACGAGGACGGTAGCAATTCTAAAGAATCGAACAGTGCGC
TTATCGTGCAATATAAAACAATGATTAGAGAGCAGGTAAGGAGAAGACAA
TGCTCCCGTCTCAATTGACCAACTCCGAGTTGATTGCTGTCTTCCAATTA
CTTGTAGTAGTAATTCAACTCCATTGAAGCAAAGGATGGTAATAAAGGAC
TCTATGTTTTTTTGTGAAATAATAATCTTAACCTTATAGTCAGTGTGAAA
CGATTGATACGTACTTTGTAAAGACTATGTAGCCCCTCGGATAGTGATTT
GAGTATTAAGACCTTTGACATGGGCACTTACTTATAAAATGAGAAAATTT
TTGAATGGAAAATTGAAAATAAATATTCGTGTCTATTTTACAGGACGACA
GACTTCGAGCTGCAAATACATCATATAAACAACTACACGATTCTTTTCAA
ATCGTAAGTCAACTTTTTCTGTAAAAACATTTTAAGACAATCGGGACAAA
CTTGGAAAGGCCAGCCAGTAGAGCATCTCTATCCAATTTAGGACCACTGT
CAATTCATCAAATGGTTATTCTAGTTTTGGTGGTAAATGGCTTGGAGCTG
AGGCCATTTTTCACTCATGTCGAAGTCAAATAAATTATCTTAATTCTGAC
ACCGCATAAAGTTCAAGCGTATCACAGCCTTACTTATTAGCGAGTTTATG
TATGAGTGTTTTTCTGCGACGGAGGCGGTTACCTCCTGATTGTTTTAGAT
CCTCATTTAATACAGCACTTTTACCGTCCTCAATTTTGCGGGTTAGAACT
GCGGGTTATCCCAAATCGCTTCAGCTATTCCTTTATGTTCAAAACTGCAA
ATACATAAATTCGCTACTACCTTATTGGAACTAATTTTCGCGGGAACTAA
TTTTCGCTGTCGAAAAGTAATATCCGAAAAATTGCATTTCGCGGGTTTTA
ATTTTCGCTGTTTTTTCCATTCTGGAATTTAGGCGGGTTTTAATTTTCGC
GGTTTTGCCTTTTTTTGGACAAATTTCTTTCATTTTCCTAGGGATTTTTC
AAATTTTTCGATAAAATTGGAAAAAAAATGTATTTCGCGGGAATTAATTT
TCGCGGTTTTCGACTCTCAAAATTTTTCGCGGGATCAAATTTTCGCGATT
TTGACGAAAAACCGCGAAAAACGCTAAAATTTAAACCCGCGAAAATTAGT
TCCAATAAGGTAACTCATCTCAGCGATTACCTTTATTAGTACTCGGAACG
AAATAATCAATCATTATTCAAAAGCCCTATTATAATCTTTTTAAGTTCTG
AAATTTAACTTTCATTTTTTTCACCATTTTACAGTCGCAACGTGACTTGG
AACGTCAAGCAATTGAACTTGTACAGTTACGTAATCAAGTCGGCATCATG
AAAGGTAAACCAAAATCCGGGAGACTTCAGGGGACTCTTAAATTAGTTTG
AACTACACATAAGCACTCGTCTGCATTTTTAGAACGATTTTCAAATTATA
TTACATGGTGTGCGGAAATTTTGTGGCTCGATGATTTGAATATATTACCC
ACCCATTTGGGAATACAAAGTATCGATAAATTTATAGTAATATTATTCAA
GCCTCGAATTTGAAAGTTTGTCCATTCTACAGCTATCTACATTTACGAAA
AGAATATGAGTGAAATGAATTGTGTTTGATACGTCCACGTTTTAGCGAAT
TCATTACGTAATGTTTGTTATACCCCAGTTTTTGCCAGGAGAGTCAAATT
TCAGATGTAGAAAAATTGTTTAAAATTTTCTACTACTGACAAAACCGTGA
TGTTTCAGTAGAAAACCTTACGTTATGAATATCATGAATCAGAGTTTATT
CGGTTGATTTTTTTCTTGTAAATTCCACGTTAATCAAGAAGATTTGATTT
GTGAAATTTGGCAAATCTTATCTCCTTACCAGAACAAAGTCCAGTGAACA
CGCCGACAGACCAATTGGAACGGTTTCAAGCGCAAGTCACTTCGTTACAA
GAACAATTGAAAGAACGCGATCAAACCATACAAGACTTGGTATGCTTTAT
TTTAAATATTCTGTATCTTAACTTTCAATTATCAATTCTACTTTATCGAT
CTCCTGTTCGTGAAGTCGAACGATTGGGAGTGAATTGAGTAACCATAATG
CCCATGTCTTGGTTGGTTGAACTTTTATTTGCATTTGACGATATCGCCAT
TTTGAATGCAAGGCTGAAATCTAAATAACAGTGTGCTCCAAAATGAAATT
TGACTGGAAATTAAAGTGCATGACTTTTCTCTGTGCAAGGTTTTCTCTGT
GTCGCCACCTGGGACAATGAGTGAAACTGATAGTCTATTATATGACTGTC
TCTTCACTTTGACCGATCAATCGTTTCCCCTTTTCAGCAAGCAAAAGAGC
TTTCATCGACCAACCTCAACGGAGAAGTGCACAGTGAGAGCGGATACAAT
TCACAAGACCTCGAATCTCCCTCCTCCGTGGAGAGCGAAACACTTCTTCT
ACAAGTGGAAAGCCTCAAAGAACAAAATATTAACCTGACACAAGAGCTCG
AAAAAACGGTATATATTATATAGATATATAGATATATATTCATTACTGCT
GCTCTCTACCTGATTACCTTTGGGGATGTCCTTTGGTTGTCGAAAGTGAA
CTGTCAGGGCATAGCCACTGTATAAATAACTTTACCCCTAAAATCACTTG
ACGAACGTACCAGGGGATGGGGGTTCTTACTCAAAAAGGGAACTGGGTGT
ATGTGCGGATGATACTGGTCGGTTTTTTTACCTTCCAAAGTCTCTCTAAG
TAGACTTTCTAAGGATATGAAAAGTCAAGATTTTTAGTTACGAGGGGAGA
ATTGTGAAAATCTCCCTTTAATCTCCCAAATTTGATCTCTCTAAGGTTCG
GTTGTGGTAGATTAGGTCTGCACATACCCGATATTTTCAGTTCACACTAC
TTCACTCTAGTCCAGTCTAGTTCACCCCCTCACCGAGCGGATTAATGAGG
AAAACGTTTTTTCGTGAAAATTTATGTACATGGTTTTTAGCCAAGCCATT
TAAACGTCGCTTGGAGTCATTAAATCAATTAAAAGGAATTTTCAATTACC
CTTTCTATATGACATAATGATATCAATACGATATTAACTCTTCTTTTCCT
TACAGAAAGCCAGTTTAACAGTTACTCAAGCCTCTCTTGAAGTCATTACT
ACAAATAAAATGGAAGAAAGCGAAACAAATCGGTTATCACAAGAAGAAAT
AGAGGAACTTCAATCGTTACGTTTAAAAGTTACTTCAATGCAAACAGAAA
ATACACGTCTCAAGGAGCAAGTTCGGGTGAGTTTTCTGTGTGTTTATAGG
TTTTATTTTACATACTCTCGGGTGCCTAATAGCCGAGGGGCCTGCTAATT
AATTTTTCGAAAATTTTCCGCTCAGGACATTCTTATTTCAACCCCCCCCC
CCCCCGCTTATTGATTTTTGGGAAAATTTTTCCCTCTTTTGCCCTAATCC
TCCTTTTCGAAAATTTTCCCCCCAGGACATTTTTTTTTCAACCCCCCCCC
CCCTCGCTTATTGATTTTTGGGAAAATTTTTCCCTCTTTTGCCCTAATCC
TCCTTTTCGAAAATTTTCCACCCAGGACATTTTTATTCCAACCCCCCCCC
GCCTATTAAATTTTGAGATTTTTTCCAAACTCCCGCTTATTCCAAACCCC
CGGGCTATTAGGTACCCGAGAGTAAGTGTTCTCGTTTCATATCAGACACA
TATTTCATATCAGGACGGTTTCTGCCTATTGTTATATTATGCTGATATAA
ACAAAAAATTATTTTCCTTTTCCTCTTTCTGTCCAATCTTGCTGTAAATC
AAAATTGATGAATAAGCAATTGTGATAATACCGAAATATATCGTTTGATT
GTCTTTTACAAAAATTTAACCTTGAAAAATGGCTTCAAATTATAAGATTT
TCTTGGTCTATTTTTTGAGAAAATGTAAACAATTCGCTAAACTTTTTCCA
TTTGTCAATGTCTTTTGTCTACGTTTGTCCATGAGAATTTTTAGCCTCTT
AGAATCTGTCCGATCGGTCATTGAGAAGAATACGTAAACGAAACGTAAAA
ACATCGTCTTTACATCTATCAACTCAAACTTAACTGCGCGGTCGTTTTTT
AAGGGGAATGGTAATGAATTTACAAGGGAATGAAATCACAACTTAGAGAA
TGCCAATGAAACGACTTCAGACATTTTGACGTCATTGCTTCCTGGTAAAC
TCGAACCGAGTCCCCTCACGCTTTAAAGGTTGATAAGTGTATGATATTAT
TCGTCCAAACAACAACGTCACACGTTCAAACAAGTCTACTTTGGTCATTT
TCTATGATTTTTTTTCGTAGACGCCAGAGAAAAATTTGGAACACATCTCG
CAATTAGAACAAGAGGTTGAATTAAAGAATATCGAACAAACACAACAACG
ACAGGACTATGAAGATCTTTTGGTTTTGTTGGAAGATCAAGATTCCAAAA
TCAAGAAATTTAAAGTAAGGGGTGATAATTTTCATTTATCCACACTTCCA
AAACTGAGCAAATATTATTATTCAACACATTTTGAGGTTCAATTTCTTAT
GAACAAGTCATACACTTACTTTAAAACATTTTCTATATGCCCTCATAAAC
CGGAAACCCGCCTCATTTGCAACATTTTGACGTACAGTATTTTGGCCTAT
TTTGTCTTCTCAGGAGGCATATTAAACGTCTTTCTTTGAAAACTCTGAAG
GGTTTGTATCGAAAAAAGATCCTGTTATTGTCACTTATGAATTTTTTTTT
AATTTTTGGTTTCAATCAAATGAGCTGAACTTTTTATCGTTCCTAGACTC
GACTACGTGAATTGGGTGAAGTTGTTCCAAGTGATTCTGCTGACGATGAT
TCTGCCGAGGAAGATTAATATACTTCCCTGATTGGTCCATTTGATGCAAA
GATCTTCTCTGATTGGTCCATTTGATACAAAGATCTTCTCTGATTGGTCC
TTTTGATGCAAAGGTCTTCCCTGATTGGTCCCTTTGATGCAAAGATCTTC
TCTGATTGGTTACTTTAATGCAAAGATCTTCCCTGATTGGTCCCTTTGAT
ACAATGTCACTCCCTGATTGGTTACTTTGATGCAAAGATTCTCTACGATT
GGTCCCTTTATGATGCAAATACACTCTCTGATTGGTTCAGTCCAAATGGG
GGGATTGGCTCGTCTTATTTGTTTCATTTTGTACAAAGACATTTTTAAAT
TTGGTCTTTTGATCAATTGATA

Coding sequence (CDS) from alignment at sc0000287:190328..196499-

>TCONS_00018100 ID=TCONS_00018100|Name=TCONS_00018100|organism=Clytia hemisphaerica|type=CDS|length=8532bp|location=Sequence derived from alignment at sc0000287:190328..196499- (Clytia hemisphaerica)
ACTCGACTACGTGAATTGGGTGAAGTTGTTCCAAGTGATTCTGCTGACGA
TGATTCTGCCGAGGAAGATTAAACGCCAGAGAAAAATTTGGAACACATCT
CGCAATTAGAACAAGAGGTTGAATTAAAGAATATCGAACAAACACAACAA
CGACAGGACTATGAAGATCTTTTGGTTTTGTTGGAAGATCAAGATTCCAA
AATCAAGAAATTTAAAAAAGCCAGTTTAACAGTTACTCAAGCCTCTCTTG
AAGTCATTACTACAAATAAAATGGAAGAAAGCGAAACAAATCGGTTATCA
CAAGAAGAAATAGAGGAACTTCAATCGTTACGTTTAAAAGTTACTTCAAT
GCAAACAGAAAATACACGTCTCAAGGAGCAAGTTCGGCAAGCAAAAGAGC
TTTCATCGACCAACCTCAACGGAGAAGTGCACAGTGAGAGCGGATACAAT
TCACAAGACCTCGAATCTCCCTCCTCCGTGGAGAGCGAAACACTTCTTCT
ACAAGTGGAAAGCCTCAAAGAACAAAATATTAACCTGACACAAGAGCTCG
AAAAAACGAACAAAGTCCAGTGAACACGCCGACAGACCAATTGGAACGGT
TTCAAGCGCAAGTCACTTCGTTACAAGAACAATTGAAAGAACGCGATCAA
ACCATACAAGACTTGTCGCAACGTGACTTGGAACGTCAAGCAATTGAACT
TGTACAGTTACGTAATCAAGTCGGCATCATGAAAGGACGACAGACTTCGA
GCTGCAAATACATCATATAAACAACTACACGATTCTTTTCAAATCTGAAT
ATCAGCAAAGTGATTTTGGAAGATGAAGATGACGAGGACGGTAGCAATTC
TAAAGAATCGAACAGTGCGCTTATCGTGCAATATAAAACAATGATTAGAG
AGCAGTTGTTCGATCACGAATTCACGCGACAATTCAAAAAGCTAGAAGAC
TCGACTACGTGAATTGGGTGAAGTTGTTCCAAGTGATTCTGCTGACGATG
ATTCTGCCGAGGAAGATTAAACGCCAGAGAAAAATTTGGAACACATCTCG
CAATTAGAACAAGAGGTTGAATTAAAGAATATCGAACAAACACAACAACG
ACAGGACTATGAAGATCTTTTGGTTTTGTTGGAAGATCAAGATTCCAAAA
TCAAGAAATTTAAAAAAGCCAGTTTAACAGTTACTCAAGCCTCTCTTGAA
GTCATTACTACAAATAAAATGGAAGAAAGCGAAACAAATCGGTTATCACA
AGAAGAAATAGAGGAACTTCAATCGTTACGTTTAAAAGTTACTTCAATGC
AAACAGAAAATACACGTCTCAAGGAGCAAGTTCGGCAAGCAAAAGAGCTT
TCATCGACCAACCTCAACGGAGAAGTGCACAGTGAGAGCGGATACAATTC
ACAAGACCTCGAATCTCCCTCCTCCGTGGAGAGCGAAACACTTCTTCTAC
AAGTGGAAAGCCTCAAAGAACAAAATATTAACCTGACACAAGAGCTCGAA
AAAACGAACAAAGTCCAGTGAACACGCCGACAGACCAATTGGAACGGTTT
CAAGCGCAAGTCACTTCGTTACAAGAACAATTGAAAGAACGCGATCAAAC
CATACAAGACTTGTCGCAACGTGACTTGGAACGTCAAGCAATTGAACTTG
TACAGTTACGTAATCAAGTCGGCATCATGAAAGGACGACAGACTTCGAGC
TGCAAATACATCATATAAACAACTACACGATTCTTTTCAAATCTGAATAT
CAGCAAAGTGATTTTGGAAGATGAAGATGACGAGGACGGTAGCAATTCTA
AAGAATCGAACAGTGCGCTTATCGTGCAATATAAAACAATGATTAGAGAG
CAGTTGTTCGATCACGAATTCACGCGACAATTCAAAAAGCTAGAAGACTC
GACTACGTGAATTGGGTGAAGTTGTTCCAAGTGATTCTGCTGACGATGAT
TCTGCCGAGGAAGATTAAACGCCAGAGAAAAATTTGGAACACATCTCGCA
ATTAGAACAAGAGGTTGAATTAAAGAATATCGAACAAACACAACAACGAC
AGGACTATGAAGATCTTTTGGTTTTGTTGGAAGATCAAGATTCCAAAATC
AAGAAATTTAAAAAAGCCAGTTTAACAGTTACTCAAGCCTCTCTTGAAGT
CATTACTACAAATAAAATGGAAGAAAGCGAAACAAATCGGTTATCACAAG
AAGAAATAGAGGAACTTCAATCGTTACGTTTAAAAGTTACTTCAATGCAA
ACAGAAAATACACGTCTCAAGGAGCAAGTTCGGCAAGCAAAAGAGCTTTC
ATCGACCAACCTCAACGGAGAAGTGCACAGTGAGAGCGGATACAATTCAC
AAGACCTCGAATCTCCCTCCTCCGTGGAGAGCGAAACACTTCTTCTACAA
GTGGAAAGCCTCAAAGAACAAAATATTAACCTGACACAAGAGCTCGAAAA
AACGAACAAAGTCCAGTGAACACGCCGACAGACCAATTGGAACGGTTTCA
AGCGCAAGTCACTTCGTTACAAGAACAATTGAAAGAACGCGATCAAACCA
TACAAGACTTGTCGCAACGTGACTTGGAACGTCAAGCAATTGAACTTGTA
CAGTTACGTAATCAAGTCGGCATCATGAAAGGACGACAGACTTCGAGCTG
CAAATACATCATATAAACAACTACACGATTCTTTTCAAATCTGAATATCA
GCAAAGTGATTTTGGAAGATGAAGATGACGAGGACGGTAGCAATTCTAAA
GAATCGAACAGTGCGCTTATCGTGCAATATAAAACAATGATTAGAGAGCA
GTTGTTCGATCACGAATTCACGCGACAATTCAAAAAGCTAGAAGACTCGA
CTACGTGAATTGGGTGAAGTTGTTCCAAGTGATTCTGCTGACGATGATTC
TGCCGAGGAAGATTAAACGCCAGAGAAAAATTTGGAACACATCTCGCAAT
TAGAACAAGAGGTTGAATTAAAGAATATCGAACAAACACAACAACGACAG
GACTATGAAGATCTTTTGGTTTTGTTGGAAGATCAAGATTCCAAAATCAA
GAAATTTAAAAAAGCCAGTTTAACAGTTACTCAAGCCTCTCTTGAAGTCA
TTACTACAAATAAAATGGAAGAAAGCGAAACAAATCGGTTATCACAAGAA
GAAATAGAGGAACTTCAATCGTTACGTTTAAAAGTTACTTCAATGCAAAC
AGAAAATACACGTCTCAAGGAGCAAGTTCGGCAAGCAAAAGAGCTTTCAT
CGACCAACCTCAACGGAGAAGTGCACAGTGAGAGCGGATACAATTCACAA
GACCTCGAATCTCCCTCCTCCGTGGAGAGCGAAACACTTCTTCTACAAGT
GGAAAGCCTCAAAGAACAAAATATTAACCTGACACAAGAGCTCGAAAAAA
CGAACAAAGTCCAGTGAACACGCCGACAGACCAATTGGAACGGTTTCAAG
CGCAAGTCACTTCGTTACAAGAACAATTGAAAGAACGCGATCAAACCATA
CAAGACTTGTCGCAACGTGACTTGGAACGTCAAGCAATTGAACTTGTACA
GTTACGTAATCAAGTCGGCATCATGAAAGGACGACAGACTTCGAGCTGCA
AATACATCATATAAACAACTACACGATTCTTTTCAAATCTGAATATCAGC
AAAGTGATTTTGGAAGATGAAGATGACGAGGACGGTAGCAATTCTAAAGA
ATCGAACAGTGCGCTTATCGTGCAATATAAAACAATGATTAGAGAGCAGT
TGTTCGATCACGAATTCACGCGACAATTCAAAAAGCTAGAAGACTCGACT
ACGTGAATTGGGTGAAGTTGTTCCAAGTGATTCTGCTGACGATGATTCTG
CCGAGGAAGATTAAACGCCAGAGAAAAATTTGGAACACATCTCGCAATTA
GAACAAGAGGTTGAATTAAAGAATATCGAACAAACACAACAACGACAGGA
CTATGAAGATCTTTTGGTTTTGTTGGAAGATCAAGATTCCAAAATCAAGA
AATTTAAAAAAGCCAGTTTAACAGTTACTCAAGCCTCTCTTGAAGTCATT
ACTACAAATAAAATGGAAGAAAGCGAAACAAATCGGTTATCACAAGAAGA
AATAGAGGAACTTCAATCGTTACGTTTAAAAGTTACTTCAATGCAAACAG
AAAATACACGTCTCAAGGAGCAAGTTCGGCAAGCAAAAGAGCTTTCATCG
ACCAACCTCAACGGAGAAGTGCACAGTGAGAGCGGATACAATTCACAAGA
CCTCGAATCTCCCTCCTCCGTGGAGAGCGAAACACTTCTTCTACAAGTGG
AAAGCCTCAAAGAACAAAATATTAACCTGACACAAGAGCTCGAAAAAACG
AACAAAGTCCAGTGAACACGCCGACAGACCAATTGGAACGGTTTCAAGCG
CAAGTCACTTCGTTACAAGAACAATTGAAAGAACGCGATCAAACCATACA
AGACTTGTCGCAACGTGACTTGGAACGTCAAGCAATTGAACTTGTACAGT
TACGTAATCAAGTCGGCATCATGAAAGGACGACAGACTTCGAGCTGCAAA
TACATCATATAAACAACTACACGATTCTTTTCAAATCTGAATATCAGCAA
AGTGATTTTGGAAGATGAAGATGACGAGGACGGTAGCAATTCTAAAGAAT
CGAACAGTGCGCTTATCGTGCAATATAAAACAATGATTAGAGAGCAGTTG
TTCGATCACGAATTCACGCGACAATTCAAAAAGCTAGAAGACTCGACTAC
GTGAATTGGGTGAAGTTGTTCCAAGTGATTCTGCTGACGATGATTCTGCC
GAGGAAGATTAAACGCCAGAGAAAAATTTGGAACACATCTCGCAATTAGA
ACAAGAGGTTGAATTAAAGAATATCGAACAAACACAACAACGACAGGACT
ATGAAGATCTTTTGGTTTTGTTGGAAGATCAAGATTCCAAAATCAAGAAA
TTTAAAAAAGCCAGTTTAACAGTTACTCAAGCCTCTCTTGAAGTCATTAC
TACAAATAAAATGGAAGAAAGCGAAACAAATCGGTTATCACAAGAAGAAA
TAGAGGAACTTCAATCGTTACGTTTAAAAGTTACTTCAATGCAAACAGAA
AATACACGTCTCAAGGAGCAAGTTCGGCAAGCAAAAGAGCTTTCATCGAC
CAACCTCAACGGAGAAGTGCACAGTGAGAGCGGATACAATTCACAAGACC
TCGAATCTCCCTCCTCCGTGGAGAGCGAAACACTTCTTCTACAAGTGGAA
AGCCTCAAAGAACAAAATATTAACCTGACACAAGAGCTCGAAAAAACGAA
CAAAGTCCAGTGAACACGCCGACAGACCAATTGGAACGGTTTCAAGCGCA
AGTCACTTCGTTACAAGAACAATTGAAAGAACGCGATCAAACCATACAAG
ACTTGTCGCAACGTGACTTGGAACGTCAAGCAATTGAACTTGTACAGTTA
CGTAATCAAGTCGGCATCATGAAAGGACGACAGACTTCGAGCTGCAAATA
CATCATATAAACAACTACACGATTCTTTTCAAATCTGAATATCAGCAAAG
TGATTTTGGAAGATGAAGATGACGAGGACGGTAGCAATTCTAAAGAATCG
AACAGTGCGCTTATCGTGCAATATAAAACAATGATTAGAGAGCAGTTGTT
CGATCACGAATTCACGCGACAATTCAAAAAGCTAGAAGACTCGACTACGT
GAATTGGGTGAAGTTGTTCCAAGTGATTCTGCTGACGATGATTCTGCCGA
GGAAGATTAAACGCCAGAGAAAAATTTGGAACACATCTCGCAATTAGAAC
AAGAGGTTGAATTAAAGAATATCGAACAAACACAACAACGACAGGACTAT
GAAGATCTTTTGGTTTTGTTGGAAGATCAAGATTCCAAAATCAAGAAATT
TAAAAAAGCCAGTTTAACAGTTACTCAAGCCTCTCTTGAAGTCATTACTA
CAAATAAAATGGAAGAAAGCGAAACAAATCGGTTATCACAAGAAGAAATA
GAGGAACTTCAATCGTTACGTTTAAAAGTTACTTCAATGCAAACAGAAAA
TACACGTCTCAAGGAGCAAGTTCGGCAAGCAAAAGAGCTTTCATCGACCA
ACCTCAACGGAGAAGTGCACAGTGAGAGCGGATACAATTCACAAGACCTC
GAATCTCCCTCCTCCGTGGAGAGCGAAACACTTCTTCTACAAGTGGAAAG
CCTCAAAGAACAAAATATTAACCTGACACAAGAGCTCGAAAAAACGAACA
AAGTCCAGTGAACACGCCGACAGACCAATTGGAACGGTTTCAAGCGCAAG
TCACTTCGTTACAAGAACAATTGAAAGAACGCGATCAAACCATACAAGAC
TTGTCGCAACGTGACTTGGAACGTCAAGCAATTGAACTTGTACAGTTACG
TAATCAAGTCGGCATCATGAAAGGACGACAGACTTCGAGCTGCAAATACA
TCATATAAACAACTACACGATTCTTTTCAAATCTGAATATCAGCAAAGTG
ATTTTGGAAGATGAAGATGACGAGGACGGTAGCAATTCTAAAGAATCGAA
CAGTGCGCTTATCGTGCAATATAAAACAATGATTAGAGAGCAGTTGTTCG
ATCACGAATTCACGCGACAATTCAAAAAGCTAGAAGACTCGACTACGTGA
ATTGGGTGAAGTTGTTCCAAGTGATTCTGCTGACGATGATTCTGCCGAGG
AAGATTAAACGCCAGAGAAAAATTTGGAACACATCTCGCAATTAGAACAA
GAGGTTGAATTAAAGAATATCGAACAAACACAACAACGACAGGACTATGA
AGATCTTTTGGTTTTGTTGGAAGATCAAGATTCCAAAATCAAGAAATTTA
AAAAAGCCAGTTTAACAGTTACTCAAGCCTCTCTTGAAGTCATTACTACA
AATAAAATGGAAGAAAGCGAAACAAATCGGTTATCACAAGAAGAAATAGA
GGAACTTCAATCGTTACGTTTAAAAGTTACTTCAATGCAAACAGAAAATA
CACGTCTCAAGGAGCAAGTTCGGCAAGCAAAAGAGCTTTCATCGACCAAC
CTCAACGGAGAAGTGCACAGTGAGAGCGGATACAATTCACAAGACCTCGA
ATCTCCCTCCTCCGTGGAGAGCGAAACACTTCTTCTACAAGTGGAAAGCC
TCAAAGAACAAAATATTAACCTGACACAAGAGCTCGAAAAAACGAACAAA
GTCCAGTGAACACGCCGACAGACCAATTGGAACGGTTTCAAGCGCAAGTC
ACTTCGTTACAAGAACAATTGAAAGAACGCGATCAAACCATACAAGACTT
GTCGCAACGTGACTTGGAACGTCAAGCAATTGAACTTGTACAGTTACGTA
ATCAAGTCGGCATCATGAAAGGACGACAGACTTCGAGCTGCAAATACATC
ATATAAACAACTACACGATTCTTTTCAAATCTGAATATCAGCAAAGTGAT
TTTGGAAGATGAAGATGACGAGGACGGTAGCAATTCTAAAGAATCGAACA
GTGCGCTTATCGTGCAATATAAAACAATGATTAGAGAGCAGTTGTTCGAT
CACGAATTCACGCGACAATTCAAAAAGCTAGAAGACTCGACTACGTGAAT
TGGGTGAAGTTGTTCCAAGTGATTCTGCTGACGATGATTCTGCCGAGGAA
GATTAAACGCCAGAGAAAAATTTGGAACACATCTCGCAATTAGAACAAGA
GGTTGAATTAAAGAATATCGAACAAACACAACAACGACAGGACTATGAAG
ATCTTTTGGTTTTGTTGGAAGATCAAGATTCCAAAATCAAGAAATTTAAA
AAAGCCAGTTTAACAGTTACTCAAGCCTCTCTTGAAGTCATTACTACAAA
TAAAATGGAAGAAAGCGAAACAAATCGGTTATCACAAGAAGAAATAGAGG
AACTTCAATCGTTACGTTTAAAAGTTACTTCAATGCAAACAGAAAATACA
CGTCTCAAGGAGCAAGTTCGGCAAGCAAAAGAGCTTTCATCGACCAACCT
CAACGGAGAAGTGCACAGTGAGAGCGGATACAATTCACAAGACCTCGAAT
CTCCCTCCTCCGTGGAGAGCGAAACACTTCTTCTACAAGTGGAAAGCCTC
AAAGAACAAAATATTAACCTGACACAAGAGCTCGAAAAAACGAACAAAGT
CCAGTGAACACGCCGACAGACCAATTGGAACGGTTTCAAGCGCAAGTCAC
TTCGTTACAAGAACAATTGAAAGAACGCGATCAAACCATACAAGACTTGT
CGCAACGTGACTTGGAACGTCAAGCAATTGAACTTGTACAGTTACGTAAT
CAAGTCGGCATCATGAAAGGACGACAGACTTCGAGCTGCAAATACATCAT
ATAAACAACTACACGATTCTTTTCAAATCTGAATATCAGCAAAGTGATTT
TGGAAGATGAAGATGACGAGGACGGTAGCAATTCTAAAGAATCGAACAGT
GCGCTTATCGTGCAATATAAAACAATGATTAGAGAGCAGTTGTTCGATCA
CGAATTCACGCGACAATTCAAAAAGCTAGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010151XLOC_010151Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018100-proteinTCONS_00018100-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018100-exon-sc0000287-1575043694:196457..196499TCONS_00018100-exon-sc0000287-1575043694:196457..196499Clytia hemisphaericaexon
TCONS_00018100-exon-sc0000287-1575043694:195515..195624TCONS_00018100-exon-sc0000287-1575043694:195515..195624Clytia hemisphaericaexon
TCONS_00018100-exon-sc0000287-1575043694:195147..195206TCONS_00018100-exon-sc0000287-1575043694:195147..195206Clytia hemisphaericaexon
TCONS_00018100-exon-sc0000287-1575043694:194196..194265TCONS_00018100-exon-sc0000287-1575043694:194196..194265Clytia hemisphaericaexon
TCONS_00018100-exon-sc0000287-1575043694:193561..193667TCONS_00018100-exon-sc0000287-1575043694:193561..193667Clytia hemisphaericaexon
TCONS_00018100-exon-sc0000287-1575043694:193042..193212TCONS_00018100-exon-sc0000287-1575043694:193042..193212Clytia hemisphaericaexon
TCONS_00018100-exon-sc0000287-1575043694:192274..192444TCONS_00018100-exon-sc0000287-1575043694:192274..192444Clytia hemisphaericaexon
TCONS_00018100-exon-sc0000287-1575043694:191086..191229TCONS_00018100-exon-sc0000287-1575043694:191086..191229Clytia hemisphaericaexon
TCONS_00018100-exon-sc0000287-1575043694:190587..190753TCONS_00018100-exon-sc0000287-1575043694:190587..190753Clytia hemisphaericaexon
TCONS_00018100-exon-sc0000287-1575043694:190328..190524TCONS_00018100-exon-sc0000287-1575043694:190328..190524Clytia hemisphaericaexon
TCONS_00018100-exon-sc0000287-1510915933:196457..196499TCONS_00018100-exon-sc0000287-1510915933:196457..196499Clytia hemisphaericaexon
TCONS_00018100-exon-sc0000287-1510915933:195515..195624TCONS_00018100-exon-sc0000287-1510915933:195515..195624Clytia hemisphaericaexon
TCONS_00018100-exon-sc0000287-1510915933:195147..195206TCONS_00018100-exon-sc0000287-1510915933:195147..195206Clytia hemisphaericaexon
TCONS_00018100-exon-sc0000287-1510915933:194196..194265TCONS_00018100-exon-sc0000287-1510915933:194196..194265Clytia hemisphaericaexon
TCONS_00018100-exon-sc0000287-1510915933:193561..193667TCONS_00018100-exon-sc0000287-1510915933:193561..193667Clytia hemisphaericaexon
TCONS_00018100-exon-sc0000287-1510915933:193042..193212TCONS_00018100-exon-sc0000287-1510915933:193042..193212Clytia hemisphaericaexon
TCONS_00018100-exon-sc0000287-1510915933:192274..192444TCONS_00018100-exon-sc0000287-1510915933:192274..192444Clytia hemisphaericaexon
TCONS_00018100-exon-sc0000287-1510915933:191086..191229TCONS_00018100-exon-sc0000287-1510915933:191086..191229Clytia hemisphaericaexon
TCONS_00018100-exon-sc0000287-1510915933:190587..190753TCONS_00018100-exon-sc0000287-1510915933:190587..190753Clytia hemisphaericaexon
TCONS_00018100-exon-sc0000287-1510915933:190328..190524TCONS_00018100-exon-sc0000287-1510915933:190328..190524Clytia hemisphaericaexon
TCONS_00018100-exon-sc0000287-1491911889:196457..196499TCONS_00018100-exon-sc0000287-1491911889:196457..196499Clytia hemisphaericaexon
TCONS_00018100-exon-sc0000287-1491911889:195515..195624TCONS_00018100-exon-sc0000287-1491911889:195515..195624Clytia hemisphaericaexon
TCONS_00018100-exon-sc0000287-1491911889:195147..195206TCONS_00018100-exon-sc0000287-1491911889:195147..195206Clytia hemisphaericaexon
TCONS_00018100-exon-sc0000287-1491911889:194196..194265TCONS_00018100-exon-sc0000287-1491911889:194196..194265Clytia hemisphaericaexon
TCONS_00018100-exon-sc0000287-1491911889:193561..193667TCONS_00018100-exon-sc0000287-1491911889:193561..193667Clytia hemisphaericaexon
TCONS_00018100-exon-sc0000287-1491911889:193042..193212TCONS_00018100-exon-sc0000287-1491911889:193042..193212Clytia hemisphaericaexon
TCONS_00018100-exon-sc0000287-1491911889:192274..192444TCONS_00018100-exon-sc0000287-1491911889:192274..192444Clytia hemisphaericaexon
TCONS_00018100-exon-sc0000287-1491911889:191086..191229TCONS_00018100-exon-sc0000287-1491911889:191086..191229Clytia hemisphaericaexon
TCONS_00018100-exon-sc0000287-1491911889:190587..190753TCONS_00018100-exon-sc0000287-1491911889:190587..190753Clytia hemisphaericaexon
TCONS_00018100-exon-sc0000287-1491911889:190328..190524TCONS_00018100-exon-sc0000287-1491911889:190328..190524Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000287supercontigsc0000287:190328..196499 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.39837	6.50989	1.83121	0.762363	33.4117	29.3727	53.2217	55.9139	20.8202	26.292	21.7893	12.9026	13.6856	10.7427	16.1203	20.6336	22.1124	21.9761	9.83993	15.2346	11.1456	12.1711	17.6758	18.2221	19.9137	20.773	10.4277	6.44562	20.1662	16.149
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR006955Uso1_p115_C
Vocabulary: Molecular Function
TermDefinition
GO:0008565protein transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
cellular_component GO:0005737 cytoplasm
cellular_component GO:0016020 membrane
molecular_function GO:0008565 protein transporter activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00018100 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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