TCONS_00018053 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018053
Unique NameTCONS_00018053
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length143

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018053 ID=TCONS_00018053|Name=TCONS_00018053|organism=Clytia hemisphaerica|type=transcript|length=143bp
AAATTGACAATAGTTTTAGAAACACTAGAATTTTTCACAGAACATTATAT
GCAGGGGACAAAGGTTTTTGAGAACCAAACATGTTTTTATTAAAGGTGTT
CCTCGTTATTTTTATATCTGGCATCATATCAGGAGATACTGGA
Run BLAST on NCBI

transcript from alignment at sc0000284:325447..326016+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018053 ID=TCONS_00018053|Name=TCONS_00018053|organism=Clytia hemisphaerica|type=transcript|length=570bp|location=Sequence derived from alignment at sc0000284:325447..326016+ (Clytia hemisphaerica)
AAATTGACAATAGTTTTAGAAACACTAGAATTTTTCACAGAACATTATAT
GCAGGGGACAAAGGTTTTTGAGAACCAAACATGTTTTTATTAAAGGTGTT
CCTCGTTATTTTTATATGTGAGTATCTTCGAGCTCTTGTGATATTGCTGA
AGTTGTTACTTTAAAACATCAAGGTTTGAGTTGTGGAACTCTTGAAAGAT
TTGAAAAGCGTAACATTCATGGAATTTGAATTCTAActtcagtagcgtag
ccaagaggggtgcaaaatttttgaaggagagcagatttttatgattttgt
aattatctattcatagtGTTctgcacaaattttgcgcccctcttgacTAC
GCTACTGCTAACAGCTTTTCCCGTTTCTTGTGTGAAAGTACTTCAAAAGT
ATTATTCTTGACCCTTTTTTCTCTAGCTGGCATCATATCAGGAGNCGCTA
CTGCTAACAGCAAGAACTTTACACTTTTTGGCTTTTCCCGTTTCTTGTGT
GAAAGTACTTCAAAAGTGTTattcttgactttttttttctctagCTGGCA
TCATATCAGGAGATACTGGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010121XLOC_010121Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018053-exon-sc0000284-1491911889:325447..325563TCONS_00018053-exon-sc0000284-1491911889:325447..325563Clytia hemisphaericaexon
TCONS_00018053-exon-sc0000284-1510915933:325447..325563TCONS_00018053-exon-sc0000284-1510915933:325447..325563Clytia hemisphaericaexon
TCONS_00018053-exon-sc0000284-1575043694:325447..325563TCONS_00018053-exon-sc0000284-1575043694:325447..325563Clytia hemisphaericaexon
TCONS_00018053-exon-sc0000284-1491911889:325991..326016TCONS_00018053-exon-sc0000284-1491911889:325991..326016Clytia hemisphaericaexon
TCONS_00018053-exon-sc0000284-1510915933:325991..326016TCONS_00018053-exon-sc0000284-1510915933:325991..326016Clytia hemisphaericaexon
TCONS_00018053-exon-sc0000284-1575043694:325991..326016TCONS_00018053-exon-sc0000284-1575043694:325991..326016Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000284supercontigsc0000284:325447..326016 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00018053 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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