TCONS_00018026 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018026
Unique NameTCONS_00018026
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length333

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018026 ID=TCONS_00018026|Name=TCONS_00018026|organism=Clytia hemisphaerica|type=transcript|length=333bp
GAAGAACCTTGGAAAGGATTCAATTTATGATGAACATCAGAAAAACTCGA
GAAAGCTTGAATACTTTATTGATATATACAAAACTAAACATTTTAGGGCT
TTCAAAATACCCTACATCATTGGCAAATGGTTTACAGCTCATTTTAATAA
ATTAATTTTATAATTCCCAAATGCTATTTTTACTATCAACATACATTGTA
GAGTTGTATtgcaatagcgctccgcaacgcatacgtcataattgttactt
tcacttttttttacatttgtacgagttgcaatcccacaattcaatgcggc
tcaattaaagatacatgcaagttgttatatatc
Run BLAST on NCBI

transcript from alignment at sc0000282:105945..106277

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018026 ID=TCONS_00018026|Name=TCONS_00018026|organism=Clytia hemisphaerica|type=transcript|length=333bp|location=Sequence derived from alignment at sc0000282:105945..106277 (Clytia hemisphaerica)
gatatataacaacttgcatgtatctttaattgagccgcattgaattgtgg
gattgcaactcgtacaaatgtaaaaaaaagtgaaagtaacaattatgacg
tatgcgttgcggagcgctattgcaATACAACTCTACAATGTATGTTGATA
GTAAAAATAGCATTTGGGAATTATAAAATTAATTTATTAAAATGAGCTGT
AAACCATTTGCCAATGATGTAGGGTATTTTGAAAGCCCTAAAATGTTTAG
TTTTGTATATATCAATAAAGTATTCAAGCTTTCTCGAGTTTTTCTGATGT
TCATCATAAATTGAATCCTTTCCAAGGTTCTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010102XLOC_010102Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018026-exon-sc0000282-1491911889:105945..106277TCONS_00018026-exon-sc0000282-1491911889:105945..106277Clytia hemisphaericaexon
TCONS_00018026-exon-sc0000282-1510915933:105945..106277TCONS_00018026-exon-sc0000282-1510915933:105945..106277Clytia hemisphaericaexon
TCONS_00018026-exon-sc0000282-1575043694:105945..106277TCONS_00018026-exon-sc0000282-1575043694:105945..106277Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000282supercontigsc0000282:105945..106277 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.296835	0	0.753492	0	0.387013	0	0.781681	0.779574	0	2.5264	0.336128	0.391455	2.45849	2.61399	1.42143	3.30442	0.233142	0.496748	1.17963	0.751675	2.39079	1.58913	0.685135	0.620365	0	1.39532	2.03946	2.86093	1.4698	1.9663
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00018026 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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