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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00017994 ID=TCONS_00017994|Name=TCONS_00017994|organism=Clytia hemisphaerica|type=transcript|length=651bp
CTCGTATAATGAATGTCATTTACGGTTTATGAGGTGAAAGTGGAAGGTTT
GAGCGAGGTAGGAATCAAGCATAGACGATTGTTCAAAATGGCTGCCGCTT
CTACATCATCTGAAAAACTCAATTCTTGTGTAAAAACAGATGTATTTTTA
TCTCACGATTGGGGTGAAGATGGTATAACTAATCACAAAAAGGTCGAGAA
AATCAACGAGGCGATCAAAGGATTGGGATACGTGACTTGGTTCGATAATG
AACGAATGGTTGGTAACGTACGAGAACAAATGGCAAACGGGATCGAAAAC
ACCAGATGTTTTATTGCTTTCATTACAAGACGTTACCACGAAAAAGTGGT
CTTCGGTACTGATAGAGATAACTGTCGAGCTGAATTCGATTACGCCAGCA
CGAAAGTCCCAATGGTAGCTGTACTTCTTGATCCATCGATGAAAAACCCT
CAGGATTGGAAAGGGAATCTAGGATTAACACTAGCAACCAAATTATATAT
TGACTTGTCTGGTGACATCAATGATGAAAAGTATTTGACGAATCAACTCA
AACTTCTGGAAAAAGATTTGACGTCCAAAGGAATCTTCCCAAATAAATTA
GAAAAGACAACGAATGAAttgaaagTTTTAGATATTCGAGAGGAAGACAA
C Run BLAST on NCBI transcript from alignment at sc0000282:51266..52508- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00017994 ID=TCONS_00017994|Name=TCONS_00017994|organism=Clytia hemisphaerica|type=transcript|length=1243bp|location=Sequence derived from alignment at sc0000282:51266..52508- (Clytia hemisphaerica)
CTCGTATAATGAATGTCATTTACGGTTTATGAGGTGAAAGTGGAAGGTTT
GAGCGAGGTAGGAATCAAGCATAGACGATTGTTCAAAATGGCTGCCGCTT
CTACATCATCTGAAAAACTCAATTCTTGTGTAAAAACAGATGTATTTTTA
TCTCACGATTGGGGTGAAGATGGTATAACTAATCACAAAAAGGTCGAGAA
AATCAACGAGGCGATCAAAGGATTGGGATACGTGACTTGGTTCGATAATG
AACGAATGGTTGGTAACGTACGAGAACAAATGGCAAACGGGATCGAAAAC
ACCAGATGTTTTATTGCTTTCATTACAAGACGTTACCACGAAAAAGTGGT
CTTCGGTACTGATAGAGATAACTGTCGAGCTGAATTCGATTACGCCAGCA
CGAAAGTCCCAATGGTAGCTGTACTTCTTGATCCATCGATGAAAAACCCT
CAGGATTGGAAAGGGAATCTAGGATTAACACTAGCAACCAAATTATATAT
TGACTTGTCTGGTGACATCAATGATGAAAAGTATTTGACGAATCAACTCA
AACTTCTGGAAAAAGATTTGACGTCCAAAGGAATCTTCCCAAATAAATTA
GAAAAGACAACGAATGAATTGAAAGGTAATTTTTTTGTCTCGTTTTATAG
AAATTGAATCGATAAAGGCCAGCAAAACTAAGTTTTAAAGCCTCATAAAA
ACTAGCCATCCACTAAATTATTTTTCTCCTGATAACTACCTTAACTTTGA
TTATAAACATAGTCGAACGTGCGCATTGCACTTGGGCTCAACTTTGGTCG
CTTTAAATTATTAATGGGTCAGATTGTGGCCAAACAAACACAAAAAGTAT
TGCCCAGGCCCTATAAATATTCCATAATTCACCCAAGGAATAGGTGTGTC
AAATTTGTATTGAATAAAACTTATATTTTCTTCGTGGAAAATATGAAATA
TAACATTTTTGAACGCATTTTTAGCATTTTTAGCCAATCAAAATGCTAAT
ATTTTTCATGATTTAATACAGACCACGGTAGATTTCTTTGTTTAAATTTT
GCTCTTAAAATGTGATCTTTTTTGTTGCTCTTGTGGGTTTCAAAGAAATT
TGTTTAAATAAAGCTATTGTCGATTTCACGTCCAAAGTTTCTGACCAAAT
GTATCGGCTTTAAACAAAATTATCATATCCAGGCCAATGCCCCCAGTAAC
AAATATTACGCTTATAGTTTTAGATATTCGAGAGGAAGACAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00017994-exon-sc0000282-1575043694:51884..52508 | TCONS_00017994-exon-sc0000282-1575043694:51884..52508 | Clytia hemisphaerica | exon |
| TCONS_00017994-exon-sc0000282-1575043694:51266..51291 | TCONS_00017994-exon-sc0000282-1575043694:51266..51291 | Clytia hemisphaerica | exon |
| TCONS_00017994-exon-sc0000282-1510915933:51884..52508 | TCONS_00017994-exon-sc0000282-1510915933:51884..52508 | Clytia hemisphaerica | exon |
| TCONS_00017994-exon-sc0000282-1510915933:51266..51291 | TCONS_00017994-exon-sc0000282-1510915933:51266..51291 | Clytia hemisphaerica | exon |
| TCONS_00017994-exon-sc0000282-1491911889:51884..52508 | TCONS_00017994-exon-sc0000282-1491911889:51884..52508 | Clytia hemisphaerica | exon |
| TCONS_00017994-exon-sc0000282-1491911889:51266..51291 | TCONS_00017994-exon-sc0000282-1491911889:51266..51291 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000282 | supercontig | sc0000282:51266..52508 - |
Blast
The following BLAST results are available for this feature:
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