TCONS_00017979 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017979
Unique NameTCONS_00017979
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1455

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017979 ID=TCONS_00017979|Name=TCONS_00017979|organism=Clytia hemisphaerica|type=transcript|length=1455bp
GATTCATATCACATGATGAGGTGCTTCTGGTTCCACAATTAGCCGATTTG
AAGATGAATTTGGAGCAAGTGGATGACATGTTTTTCATGCTCAAAATGGA
CCAGAATAAAGATGGAAAAGTCGAGCTTAATGAACTGAAGAAGATCGATT
TATCTTCCATTGGCAATTACGTCACACAATTACGTCATGATCCATCACGA
TTACGTAATGTGACGGTCGAAAGTGGTTGGGTATGGGCGGATGAAGATGA
TTTGTTGAAATATGAAAAGAACGGATATTTTGAAGACTATCACGCCAGAT
TATCAACATTAACAGAAGTCCCGTCCATCCTCTGGGAAATGAGCGAACCG
CTacaaatccgccattatggagcaTCACAATTCCAAACACATCGCCATGA
CAGCGAGGCACCAAACAAAGACATCCCATGCTGTCTCTATGGTGATCAAG
ACAAAAAATGCCGCGTTTGCAGATATCTTTCTTTCACCATGTTCTTGAAC
GATGTCGAAGAAGGCGGTGAATTGGTTTTCCCGCTCGCCAACAACCCCTT
CAAAGACATCATGAAAAATTCTGGTGAATGGCATGGCTATTATCTATACT
CCAAAACCACAGGCAGTAGAACATTTTTCACCGTCGACATGCATTTCACA
CCAGGAGAAAACGACAATGGAACTTTCAATGCGTCTGGACGTGAAAATGG
TGGAGAGTTCGTGTTCCGTAATGCGGTAATTGAAGGAGAAAcggtgaaat
ttgaaaaagtttacaaacCATCCGAAGCTGAAGAGACTGGAAACGAACAA
GGGATTCGTTACCATGGAAAGATCATTGAACAGACACAAATCATGGGATA
TTGGTGGGTTCCTGGCAATCAACGAATGAATGGCCGTTTCTTCATGTGGA
ATCGAGAGTTTGAGATTTACTCCGCCCGCGCGGTCGACCAATCAAATCGA
AACGAAGGTTGTTTGAAAGCTCCTTTGAAAATCAAACCGAAAAAAGGAAA
AGCTGTTTTCTGGTACAACCATCATTTGAACCCCCTGAATGATATGGTTG
GACCTTTAAATCATGAGGCGATTTTCGCACATTGTGAAGTGAACCAAGGG
GTCAAATGGACCGCGTCTGGTCGGCTAAATATCATCGGAGATGGAGAGCT
TAAATTACGTACGTGGAGAAGAGGAACTAATTTAATGCATGACCGGAAAA
AAATGCGGAAAATTTATCAGCGGTTAGGAACGAACGAACCAAAGCGAGAA
ATCGAGGAATACGAAAAAGACTTTTATGAAGAAATTCACGGTAAAAAAAC
TGGGAATGATTCTGCAAAGGATTCTGGGTATAAATATAAACAATCGAGTA
ATGCATTGCAAGCGTTGAACCTGTTGGTGAACGATTTATCGAATGAACAA
TTATCCATAATGGCAGCCAATGTGCATCGCATTTTAGGCCTGCAGTGTAT
GTAAG
Run BLAST on NCBI

transcript from alignment at sc0000282:123140..135334+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017979 ID=TCONS_00017979|Name=TCONS_00017979|organism=Clytia hemisphaerica|type=transcript|length=12195bp|location=Sequence derived from alignment at sc0000282:123140..135334+ (Clytia hemisphaerica)
GATTCATATCACATGATGAGGTTTGTTTGATTTCTCCCTCCGAAGAAGGG
TCTCTTAGTTAAAAGTTCCCGTATAAGGTTGTAAGTAAACTCCTCCTTTG
GGATTATGATCAAGACGGATTCATATCACATGATGAGGTTTGTTTGATTT
CTCCCTCCGAAGAAGGGTCTCTTAGTTAAAAGTTCCCGTATAAGGTTGTA
AGTAAACTCCTCCTTTGGGATTATGATCAAGACGGATTCATATCACATGA
TGAGGTTTGTTTGATTTCTCCCTCCGAAGAAGGGTCTCTTAGTTAAAAGT
TCCCGTATAAGGTTGTAAGTAAACTCCTCCTTTGGGATTATGATCAAGAC
GGATTCATATCACATGATGAGGTTTGTTTGATTTCTCCCTCCGAAGAAGG
GTCTCTTAGTTAAAAGTTCCCGTATAAGGTTGTAAGTAAACTCCTCCTTT
GGGATTATGATCAAGACGGATTCATATCACATGATGAGGTTTGTTTGATT
TCTCCCTCCGAAGAAGGGTCTCTTAGTTAAAAGTTCCCGTATAAGGTTGT
AAGTAAACTCCTCCTTTGGGATTATGATCAAGACGGATTCATATCACATG
ATGAGGTTTGTTTGATTTCTCCCTCCGAAGAAGGGTCTCTTAGTTAAAAG
TTCCCGTATAAGGTTGTAAGTAAACTCCTCCTTTGGGATTATGATCAAGA
CGGATTCATATCACATGATGAGGTTTGTTTGATTTCTCCCTCCGAAGAAG
GGTCTCTTAGTTAAAAGTTCCCGTATAAGGTTGTAAGTAAACTCCTCCTT
TGGGATTATGATCAAGACGGATTCATATCACATGATGAGGTTTGTTTGAT
TTCTCCCTCCGAAGAAGGGTCTCTTAGTTAAAAGTTCCCGTATAAGGTTG
TAAGTAAACTCCTCCTTTGGGATTATGATCAAGACGGATTCATATCACAT
GATGAGGTTTGTTTGATTTCTCCCTCCGAAGAAGGGTCTCTTAGTTAAAA
GTTCCCGTATAAGGTTGTAAGTAAACTCCTCCTTTGGGATTATGATCAAG
ACGGATTCATATCACATGATGAGGTTTGTTTGATTTCTCCCTCCGAAGAA
GGGTCTCTTagttaaatatttttgtataaGGTTGTAAGTAAACTCCTCCT
TTGGGATTATAATCAAGACAGATTCATATCACATGAcgaggtttgttttg
atttctccCTCCGAAGAAGAGTCTCTTAGTTAAAACTTTCCGTGAAAGGT
TGTAAGTAAACTCCTTCTTTGGGATAACTTCAAGACGGATTCATATCACA
TGTTGAGGTTAGTTTTGATTTCTCCCTCCGAAGAAGGGTCTcttaattaa
aagtttttcgtATAAGGTCGTAAGTAAACTCGCATGATCTCTATGCGAAG
GTCTCTTTTTAAAGGttatcaataactcttgatgtCCAAGTTAGTAATTT
TTCACTGCGAagaagggtaccttttttaggGAAACtttacaccttttcga
ctgtagtcgcgcggtcaggtgcgTGCCACTATATTATTTAATTACCCCCC
AAATCAATCCAATCCTTCTTTTACACCTTTTTTCTGTTGTCCATAGGTGC
GAAAAAATGACTAGGACTGTTTTAGGGTGGTGAaaaggacaaaaaatgcc
cacgtggcaattggcggctacggtcgaaaaggtgtattgcgtCCCTCACA
CGACTTAAGGtttaatctcaaaattaataccttatgaaatttagagtttt
actgtggtggtcatctttgagattgagattgcccttttttcatgtagagg
aatagtcgatgttttcatatgacaaaaaggccaatctcaaaggcagaaca
ggattgcaagatttccaattttccaagacacttattttgagattgaacct
ttagttAGCCTTTACGAATGCCCTCAACagatattgggcttttccagaaa
aaaatcgtgcaccccctgttgaggaggtccatttccgttccaagggggta
aggtttgaaatgtagtggaattccataagggtagacgaaaatccgtcaaa
aataagcggaattccaagggggtaatgattgaaaatttgtaaaaattcgg
aattccagaggggtttgaTCCTAAAactgcctggaattccaagggggtag
gtcacaaaaggttgaacctcctcaacagggggtgcacggttttttcctgg
aaaagcccagctggaaagaaaaaactttgttttaacGGCTATACAAAACA
AACTTTTCCACAGGTGCTTCTGGTTCCACAATTAGCCGATTTGAAGATGA
ATTTGGAGCAAGTGGATGACATGTTTTTCATGCTCAAAATGGACCAGAAT
AAAGATGGTAAGATTACTAGCTATATTGAGAGAAGAGTTTTACACATCCA
GTTTCCTGGTTATCCAATAGCAACTTTTCTAATTTTGTGAGTATAAATTT
CATAGGGTGGTGAATTATACTGGAAAGAAATAAAGCGGTCAACTTCTCTG
CTAGATGATGTTAGGTTAAGCCTGGGATTAAGGGTGTAGGACAGTTGTAA
TTGGGCGTaatcagctggcacacaacgttgcttcaacgttcatctaacat
tatatggacgttgggaACATCATATAAACGtcgaaagaacgttgtgtgtc
agctgggtaatcaaaacaaatcaaaacttgATCTAATTTCTATCAATATA
AAGACCAGCAACATTTCAAGATGGTGAGCATCAAAGATtacatcccagct
ggcacacaacgttgtttcaacgtttatctaaatgttatatggacgttgtg
aacgttagataaacgttgaaacaacgttcataaaatacacttttttcatT
CAGGAAAAGTCGAGCTTAATGAACTGAAGAAGATCGATTTATCTTCCATT
GGCAATTACGTCACACAATTACGTCATGATCCATCACGATTACGTAATGT
GACGGTCGAAAGTGGTTGGGTATGGGCGGATGAAGATGATTTGTTGAAAT
ATGAAAAGAACGGATATTTTGAAGACTATCACGCCAGGTAGGTGATGAGT
ACCtaaccaaaaaccgggatttttcattccgCTTTTTGGTGAGATAAAGC
CTATACTAGACGGTATGGCTTTTTTTCTGCGCAGTagcgtctattccact
ttgctaTTCCACTTtgtgactttttcgaatgtttggagctcaacttttct
agatccaaacattcgattttttttgccgtcactttaaactttcgaaCCTC
TTGCTGTAGGGGAAAATATAATTTACTTCAGAATACTTAAAAGGCTTCTT
TCACTAGAATTAAAGGCCGTTACATATCATCATCATTGAcgagcaatgat
gatgatgatttagGGTAGCCCCAATCGAAACCTAAAAACTTGTGGTGTCG
GAAGGCAAAATTAGATTCAGTAGATTCATCCAATGTATCTTGTGTTTAGA
TTATCAACATTAACAGAAGTCCCGTCCATCCTCTGGGAAATGAGCGAACC
GCTacaaatccgccattatggagcaTCACAATTCCAAACACATCGCCATG
ACAGCGAGGCACCAAACAAAGACATCCCATGCTGTCTCTATGGTGATCAA
GACAAAAAATGCCGCGTTTGCAGgtaggttttatttttatattagaTCTA
AACTTTCCGCTATGCTTTTCAAGGCTGTAagcattgagtttgaagcccag
AAGTGGCTAGAGAGtaatctttaacctttcctaAGGTGAGGCTTATTCAA
TTTGTTGTTTAAGCTACCAAAAAAAGAGGGTTGTttggtcggcgaaaaaa
taaaaataaaagtagaatttcacctataaaatctccaCAAAAAGCAGCAA
AAACTACTTCCTCTTGACAAAAAtgtgaaatagaaaataaaaagacacaa
aaaggttGAATACatggatgaaatgaaaaatttaacataaaattctcaaa
agcttggaaaaactaccaaaattttgaaaatttgtgagTCTGATCTTTTG
ATTCAACATTAAATCATCGAACAAACACAATGTCAAATTCAGTCTCTTTA
TTcgcgttgtttttttttcaaaaatccctAAAAATGACCCTTTTGACCTT
TTGATGACGTTATAATATTTCATGCaccattttagaattttgatGTAATT
GGTGCCTATAATGTGGATATATTTCAAGGACATTGGACTACCCTGCTAGA
AATCATTGAAGGGGGTTTAATGTCCCCccccccagggggggggggggggg
ggggaaaaaaatttttaaaaaaaaaattttttttttaaaaaaaatttccc
cccccccccccccccccggggggggggggtggaggcgAAATGATCTTATA
ATCAAGAACTTCTCATTTGAAAACGCCTATCAAAAACTGAATCTCACTTT
GGTTCAATGTtgacaaagaaaaatatatttgaaaaataagattaattaaa
attacaataaaatAGTTAATTAAACTTTTGAAGGCAATGCATTCAGGTAA
AAATAGCCttctgtttttttgtttgtttttatttccaaTAGTAGGAAAAG
TCTGGATAATTCTTCTCATATCTAATTATCTGATGCCATTACTCGTGGGT
GGGGAAAAACCATACAAAAATAACGAGTTCATTTCTGTTGGACGTGCAGA
TGTGCATTTGAAATATTACAGTCGTTGCCTTGGAAACGGCTAACAAACTT
AACTTACTGGTAGACATGAATGAAAACAATAGCTGATTTCAAATCGCCGT
AAAAAAAATCTTCAGGAATATCTTTGTAAGACCATTGTTCAAAAGTGTCA
CGTTTGTTAATTCTTACCATTTGTGCGCATTTATTTGAATCGGTAGGGTG
GAGCACAGAAATGGTTACATTCTCCCATAGGCTTTTTGGGAGCCCTTGAA
CCATAAATAATCGTTTTTGTTCCAACATAAGGCACGTGCTCAAAACTAAA
CCCAAGTAATCTTTACACTCTTCAAATTCCTTCTTCATAAAGGAGAATTT
TTTCGTTCTGTAAAGTTCTTTGTTCCCCATAAAGGAACTTATATTTTCAT
ACCATTCCTTATACGAGGGGTACAAATCAACCCGTTGTGTTATGTTTCCT
TCAAAAAACATCTCAGCTCCCCAAACAAGTCGACCTAGCTTAGAAACAGG
AGGATTTTGTGCATCATTTTGTCCCAGCTTTATTTTAAGCAACTCAATTT
TATGTTTTAGCGTTTGAATTTCACCCTCCAAAGCACGATTAACTGCAGCT
TGTTTTTGGTCTACTTTTAGTTTAATAATTTCTTGGTCATGTTTGAgatt
ttggatttctttttccATCTCTAAACACTTTATCTGGTGtttcagatttt
ctttttccttgtCTTCTCTCAACTTTGCATTTTCTTGTTTAAGtctttga
atttcttccctCGGATCCATTCCTCGATCGACTGCGCAGTGTGCTTCGTT
CATTGTGATTATGATTAAAGTTTCTCCACTTTACTTTTTTACGTACAACT
TTCACTTCTATCTAAATTATCGTCAATCATGAAAAGTTTTCGATATCAAA
GGTTCAAACCCCCCTATGTTTAAAAAATCTACAACTTTCCTGTACATATA
ATGAATTGTGTTTTCAAGTATATTGGCTAAAAATGCCTTCtaataccact
atttattacctATTAAATACAAAATTAATCTTTCAATaccattattttat
tttatttgttatcTAATTAATGTGCATTTAGCATCGACAAGTATTTTGAG
TATTTGTTATTAGAAAATGTATGGTTTTCGATCcgaaattttttaacaaa
atctagAACTAGAGTCGTTGTTGTATAAAAGATTATTTACTCGAAATCGA
TTTTTTCCAGAGCGAAGCCTCACTCAGAtatgaacaattttataaaggAC
CACGAGGCTGAAGTTTTGCAGAAACTTAAGAACATTCTGAACGACGAGGC
TTAAGTTTTGCCGAAACTTAAGAACATTCTGAACGACGAAttataaagtt
ttaaaataagaaatcgaaataataagaacaagtgaggttaagtcaaaatt
ttcaaaatttaatccaGTTCATCTGATTTCCACTCATAGATATCTTTCTT
TCACCATGTTCTTGAACGATGTCGAAGAAGGCGGTGAATTGGTTTTCCCG
CTCGCCAACAACCCCTTCAAAGTGAGTTCAAAATGTTATTTTAATCCACA
AGAGGATATAGAAGTCATTTGCTATGAAAGTTTGATTCGAGGCAACCAAA
AAAAATTGCCGATCCAGAAcactactctgatacaagagtgtgggtgatat
gccagacattgtggtgtgtggTTTTACTCATCCCGTTCTGTGCCTGAGAC
GAGCTATATGCTCTCCCGCGTAGTCCAAGTGTCACCACTATACATCATGG
TATCTGTGTCTCGCCTGCACAGAACCAGCGGTGTCTGGACAGTGCTATGC
ATTCCTACTTGAGAAAGGAGGAAGGAGTAGTATCCATTCCCCGATGTGGA
GGACTCTTATCATTGTATCAACAACTGCGAAAAAGTGTGAGTCCACGCAA
AATGGAAGCTTGGATGCTTGATAGGCTGTAGATCTAGAACGCCATCGCTT
AATTAAAGTTGTTTGATGGTTGTTTTTTGAATACATTCAACTACCATTGA
TTTGTTTTCAGGACATCATGAAAAATTCTGGTGAATGGCATGGCTATTAT
CTATACTCCAAAACCACAGGCAGTAGAACATTTTTCACCGTCGACATGCA
TTTCACACCAGGAGAAAACGACAATGGAACTTTCAATGCGTCTGGACGTG
AAAATGGTGGAGAGTTCGTGTTCCGTAATGCGGTAATTGAAGGTATTTAA
ATGATTTTTAGGACTTTAGAGTTCACTTTgtcaacaatttaaaaaaacta
gaccatagatttataaagcccgaagggctagatgtcctGAGATGTCGTGC
TTTTTGTCGTGAGGTtaagtaggaaatcctacctaggtcacgtgatatta
caatagaatttcagcgcttgaccaagaAGAAGCTCTGGcagtcaagaaca
ccttcaaattagcctatcatagactgattagcctatcataggctatttag
actattttatataggctatttagccgaaaatcgaNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTCTGATAA
TGAAGTTCTGCTGAATCGACAAAAAGCCCGATTTTCTTACCCTGCGCATG
CGCACGCATGCGCAGTaccaaaaagtggaatatttcctaaaccaaaactg
acccaaagtcaaaatttgtcatgagcatttctctgacaatgagaaaccat
gtattccttagagaagacgcgactatttatatttcgtcataaatcgaggt
ttttatcgattttcggctaaatagcctatataaaatagtctaaatagcct
atgataggctaatttgaaggtgtcctTGACTGTCTgggggttttcgaaaa
caatagcagcaatattatttgcgatattcacttttttcttttgcttggaa
gagcttaaagcacgacaccTAGCCCTTCGGGATTATTTTACGGGATTTTG
TCGATGTTTTATCTTTTAGCtagaccactgacctttataaagcATGGACA
AAGCTATATCTACCATCTTTGACTACTCGATGTGGGGTCAATTTatattt
caatgaaatttaCTGCGTTTAACAAAGGTTTCCACCCACCGAAAAACTCT
GATAAAAAATTTGAGTGACTGTGTCCAAGCAATATAAAGGTCAGTAAGCT
AGACTCCTTTGTAGTGTAGTCTTGAACAACTTAAActaacaaactttaaa
catactgaaatgaaaatcaaaatcaaaaacaacaaactttGTCTCTTTAT
TGTGTTATATTTTCACCGGGATTTTCGCTTCCTTGACGTTAGAAAAATGG
CGTCTGAAATATATTGGCAAAAAGTGAATTCGTCTCGATTTCATGCAAAA
TTCTGATGCTATTTCGTTTGAAACTTTTGCCTGTGGCATTTTCAAATTAT
ATCACCTtttcttttaacattttcttttaacTGTCCCTTCAACATTTTGA
CCATTTCTATCATAGACCGTTTCACGGTCGAAATGAATTATGGGTAATCA
TGACTGATTAAATCAACGACTTCTCTTTAACACAATCAGAATTTTAGAGC
AGCGCAACAGAAGGATGCAATGAAACGCTGTGGTCCTACTTACCCATGAT
TCCTTCGACCGTGAAATGACGTATATAAGTAAGTCCGATTGGGAAATAta
gaccacagatatcttataaaacactagataaagCTACTCTATCCTGCTTT
ACCAAGCTAAGGAGGGAAGCAAAATAATACGCCATCTTTGCTGAGAGTAG
GTCACAGTAGAAGCCCAGGTTTTCACTGTTGAAGTTTTTTTGActctgca
atgacttcaaaatttcaaggatcGCGCAAACGAAATTGTGACGTCAGTTT
ATTCAAGATAGCGCGTCATTTTGCTTCAAATAGGGATTAAGAGGAAACTC
TATCGAGTgctttatataagatatctgtggaaGAGACAGGATCTCCCACT
TCAAGGACATTCTTCTTTCGCATCTAGGAGAAAcggtgaaatttgaaaaa
gtttacaaacCATCCGAAGCTGAAGAGACTGGAAACGAACAAGGGATTCG
TTACCATGGAAAGATCATTGAACAGACACAAATCATGGGATATTGGTGGG
TTCCTGGCAATCAACGAATGAATGGCCGTTTCTTCATGTGGAATCGAGAG
TTTGAGGTACGTCTTttacgttcgttcgttcgttcgttcgttcgttcgtt
cgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcg
ttcgttcgttcgttctcAGCTCTTCTTGGAGgaatattggaaagatattc
ccaattcaaaatttcgtgtcattataagcattttgtttgattttactcgt
ctgatgatttttttctcacacaccagatttcataactGTGTCCGTTTGGT
ATTCTGGCAttattgttttcaaacttttggccagcaaaagtacgaataga
aaaagttagagaactttttagaaataagagtatttatcatttttcaaaat
cagagtccttcgagccgccatgacagttgtcctttgcggacaaagcctgt
acattgattgttttctgaaacaatagaaagacaatacttcgctctccagt
ttcattcgatgtttatccagagtctctataataaatccatgatgTGACGA
agcctaatttttgaaaaagaaaaattcttggTTCCCACATTTTCTCAAGG
CCTTATTTATCGGTAGTTtagctttctctgaaatttaACCTGTGGAGACG
GACTATAAGAATTTCATTGCGCATGTCTCAATCATAAATGACACGACCTT
CAACCAAGATTCTGGGTGATTCCCATGGCAACTTTTGTCTTCGTTAAATG
TGCTTTGAAAAGAATATCTGTCGTCACAGTgtactttttttcttctattt
ggttgagtcgcaggaggctttgaggcccattttcgcaactatagacgctt
tcaattNATTGAGTCGCAGGAGGTTTTGATGCCCATTTTCACAACTATAG
ACAGATAGACGCTTTCAATAAGctccccgtcagcaccttgaactaactac
ccaattcccctcacatggcatgggttgacccgggcgaaggttcattcact
tgccaagtgaaccgctgcgagtgggaatcgaacctcagttgcctgtgcag
caaccaaggtcaatgaccactataccacagcgcctgtACAATTCACACAC
TGTGAAGCTCATTATGCTAAATCAATTTCTTAATTACCAGTATGTGCACA
ATTTactatcattaaaaaaaaattaaatccgcTTTTTTGTCAGCCATAGT
TTCCTCCCCCTTTTCTGCTAGGGGGGGGGGGGNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNggggggggggggattttttggaaactttttgc
caaagaaggggggggggagaaaaaaacatatagtctgaatcacagacctc
tatagatataggTACTTGCTATAAGAAATCTTTTCGATAGAGGATGAGCA
TAGGCCTGACCTTCAAATAGACCCTGGAGGCAGTTTTTCGGCcctggcca
agcaaaatctttagATCGGGGTTTCTTTGAAAGGGTACcttaccctaatg
gtagcactattAGTATGCATCGATACTACTTGTGATGCAGTGCTACTTCG
ATAGTTTCTGTATGTGGCTCCcacgcaaatttttttccgtacatggaAAG
TATCATCGAtggtcgggagtatctcatattttttgtttggttttgttgtt
tggaattgcttaggtcagggttgctagtaacggctcgaatttcagtcagg
ttaaaaaaggggcaattttacccatattataataacattaccccgtcttt
tttgtcattataTAAGTATTTCCTAATGttgtgttctgctgtgcgagtgt
ggctcaacggatagcgcgctgggtttctgatcagaaactctttcatttgg
tgggttcgaaccccggtcgggtctatatttcaaggtttaagataagttta
agatactccggcccgtcgatgatactcccgaccgtcaagatgagatactc
ccgaccatgtacggaaaaaaatttgcggcTCCCACTTTTAAAAAAcacca
atcaaagatggcgcatAAAGCTCTGTCCATGATTATAAAGACCAGTGTTG
TCATCCCGTTTAAAATGATACCGTTAATCATATTATTTATGCCCCCTTTT
TCAGATTTACTCCGCCCGCGCGGTCGACCAATCAAATCGAAACGAAGGTT
GTTTGAAAGCTCCTTTGAAAATCAAACCGAAAAAAGGAAAAGCTGTTTTC
TGGTACAACCATCATTTGAACCCCCTGAATGATATGGTTGGACCTTTAAA
TCATGAGGCGATTTTCGCACATTGTGAAGTGAACCAAGGGGTCAAATGGA
CCGCGTCTGGTCGGCTAAATATCATCGGAGATGGAGAGCTTAAATTACGT
ACGTGGAGAAGAGGAACTAATTTAATGCATGACCGGAAAAAAATGCGGAA
AATTTATCAGCGGTTAGGAACGAACGAACCAAAGCGAGAAATCGAGGAAT
ACGAAAAAGACTTTTATGAAGAAATTCACGGTAAAAAAACTGGGAATGAT
TCTGCAAAGGATTCTGGGTATAAATATAAACAATCGAGTAATGCATTGCA
AGCGTTGAACCTGTTGGTGAACGATTTATCGAATGAACAATTATCCATAA
TGGCAGCCAATGTGCATCGCATTTTAGGCCTGCAGTGTATGTAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010080XLOC_010080Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017979-exon-sc0000282-1491911889:123140..123159TCONS_00017979-exon-sc0000282-1491911889:123140..123159Clytia hemisphaericaexon
TCONS_00017979-exon-sc0000282-1510915933:123140..123159TCONS_00017979-exon-sc0000282-1510915933:123140..123159Clytia hemisphaericaexon
TCONS_00017979-exon-sc0000282-1575043694:123140..123159TCONS_00017979-exon-sc0000282-1575043694:123140..123159Clytia hemisphaericaexon
TCONS_00017979-exon-sc0000282-1491911889:125403..125496TCONS_00017979-exon-sc0000282-1491911889:125403..125496Clytia hemisphaericaexon
TCONS_00017979-exon-sc0000282-1510915933:125403..125496TCONS_00017979-exon-sc0000282-1510915933:125403..125496Clytia hemisphaericaexon
TCONS_00017979-exon-sc0000282-1575043694:125403..125496TCONS_00017979-exon-sc0000282-1575043694:125403..125496Clytia hemisphaericaexon
TCONS_00017979-exon-sc0000282-1491911889:125993..126176TCONS_00017979-exon-sc0000282-1491911889:125993..126176Clytia hemisphaericaexon
TCONS_00017979-exon-sc0000282-1510915933:125993..126176TCONS_00017979-exon-sc0000282-1510915933:125993..126176Clytia hemisphaericaexon
TCONS_00017979-exon-sc0000282-1575043694:125993..126176TCONS_00017979-exon-sc0000282-1575043694:125993..126176Clytia hemisphaericaexon
TCONS_00017979-exon-sc0000282-1491911889:126589..126762TCONS_00017979-exon-sc0000282-1491911889:126589..126762Clytia hemisphaericaexon
TCONS_00017979-exon-sc0000282-1510915933:126589..126762TCONS_00017979-exon-sc0000282-1510915933:126589..126762Clytia hemisphaericaexon
TCONS_00017979-exon-sc0000282-1575043694:126589..126762TCONS_00017979-exon-sc0000282-1575043694:126589..126762Clytia hemisphaericaexon
TCONS_00017979-exon-sc0000282-1491911889:129229..129310TCONS_00017979-exon-sc0000282-1491911889:129229..129310Clytia hemisphaericaexon
TCONS_00017979-exon-sc0000282-1510915933:129229..129310TCONS_00017979-exon-sc0000282-1510915933:129229..129310Clytia hemisphaericaexon
TCONS_00017979-exon-sc0000282-1575043694:129229..129310TCONS_00017979-exon-sc0000282-1575043694:129229..129310Clytia hemisphaericaexon
TCONS_00017979-exon-sc0000282-1491911889:129801..129981TCONS_00017979-exon-sc0000282-1491911889:129801..129981Clytia hemisphaericaexon
TCONS_00017979-exon-sc0000282-1510915933:129801..129981TCONS_00017979-exon-sc0000282-1510915933:129801..129981Clytia hemisphaericaexon
TCONS_00017979-exon-sc0000282-1575043694:129801..129981TCONS_00017979-exon-sc0000282-1575043694:129801..129981Clytia hemisphaericaexon
TCONS_00017979-exon-sc0000282-1491911889:132517..132695TCONS_00017979-exon-sc0000282-1491911889:132517..132695Clytia hemisphaericaexon
TCONS_00017979-exon-sc0000282-1510915933:132517..132695TCONS_00017979-exon-sc0000282-1510915933:132517..132695Clytia hemisphaericaexon
TCONS_00017979-exon-sc0000282-1575043694:132517..132695TCONS_00017979-exon-sc0000282-1575043694:132517..132695Clytia hemisphaericaexon
TCONS_00017979-exon-sc0000282-1491911889:134794..135334TCONS_00017979-exon-sc0000282-1491911889:134794..135334Clytia hemisphaericaexon
TCONS_00017979-exon-sc0000282-1510915933:134794..135334TCONS_00017979-exon-sc0000282-1510915933:134794..135334Clytia hemisphaericaexon
TCONS_00017979-exon-sc0000282-1575043694:134794..135334TCONS_00017979-exon-sc0000282-1575043694:134794..135334Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000282supercontigsc0000282:123140..135334 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0726311	0.0616002	0.0460132	0.039925	0.394624	0.376353	0.780784	1.35931	0.223345	0.153786	0.655312	0.41718	0.398106	0.345501	0.300971	0.624782	0.622087	0.532259	0.047528	0.0479718	0.364767	0.2377	0.169877	0.168515	0.31011	0.358521	0.0557429	0.0305707	0.107819	0.0887032
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017979 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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