TCONS_00017915 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017915
Unique NameTCONS_00017915
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3411

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017915 ID=TCONS_00017915|Name=TCONS_00017915|organism=Clytia hemisphaerica|type=transcript|length=3411bp
GAATGGAGCTAACAACCTTTTATTTAGAAATGATTTAGCGTTGAATTAAT
CAAAGAATTACACGAAAAACAAACGACAATCAACTTTCAATGGTAACCCA
TTCGACATGGATCCACCATATGGACTACCAAACATTCAAAATGGACATCA
ACTCTCTCAAGAGCAACTATCAAACTTAACTCAAGCATCACGACAAGCGT
TGAATCAGATCCATGGTCCTCAAAACCCACCACCTCCCATTTATCATCCA
TTCCCACCGCCTGGCAATGGTCCCTTCTTACATCCAATGTTTCACCAACA
ATTGCAACCACCTCCGAATTACCAACCTATCGTTTATGGAGATCTCAGTT
TCCCTTATTTCGTTCCTCCTCCTCCTTTACCAGTCCAGCCATCCCAACAC
CAAGTCAGCCAGCAGTCAAATGCTCGTAACCAGCAGCAGATCTACAAGTA
CATTCCAGATCCACCGCAAAATCACCACGCAGTCCGTCACCAACTAAATC
GTAAACAAAACCAACCCCAGCACCAGTCTATTCGTCAACAAACCCAACCT
TCTAAACATTTGAATCCACAACAGAACTCTCAACTCCCGAGCTCCAATCA
TCCGAATCTGAATCGACAACAAGCTTCAAACTCGTCAAGAGAAAACTCTT
TTAATACACGAACAAACTATCAAAATCCCCCATCACTACCAACAGTTCAA
CGCCATTCCTCATCTGAAAACACACGAGATTCCCAACCGTTGACCAACAG
GGCTGGTCAGGATCTCCAGAGTGCACTTAGAAACGAACTGAATACTATTG
AACGAACTCTTTCCCAATTGCAAGAACAAAAAGACCGTTGTATCCAAGAG
TTTTCCGTTATTCGACGACTGTACGAAGAAGGACAACACGTTCGCGGTGA
CGTAAGTTCGTCAATTGCCACATTAATGCAAGAGAGAAAAAGAGtttctg
aaaaatacaaaaaaattgagaacaacttttcttatttttccaaaagaaaa
gatttaattTTGGGACTGCTTGAACAAAATGAAACGGCTACTATTCCTTC
CATTTCGAATCTGCAACCACAACCAATAGCAAACCGGAAACCACCTCCTC
TAAGAAGTCGACACAATAGCTTATCGATGCAATCCAGCTCTGGAAACAGT
GATCTACTAACACCTCCCCCAACACCACAATCACCTGATTCGTCAGGGAT
GAGATCACCGCATTTCCTTCTGCAGCATGTCGAACAAAACCCTAAACCAA
TGTCAGAACCACCTCCCTTGAAAACTGAACCTACAGCAAAGGAAGAGACC
CAACCATCTTCGACAACTGTATCTAAATCTAGACTTAAACGAACCACAAT
CTCCACGTGTATCGATTTAACCGAGGAGGACGACAAAGGAAATGAATGTA
AACCTTCAAACGCCCAAACTGTCAGCCAAGAACCTTCTCAACCCGTTGTT
AACGAAGAGCTATCTAGAACTATCGACCAAGTAGCAGAGGAATTCTCCCA
ACCTAATTTAGCTGTTCTCGAAGCAAGAGAACTTCCAGAAATTAGTGAAG
TTCTCTCTGGTAATGTAACTTTTGGGAGTGCTGAGTTTgagaaaattgtt
caaaatgaaattgacaaAGTGATTGAACCAGGGACAATAGAAGATGTAAT
TGTAAAAGTAGAGCAATATTTGAAGGAAGAAAGTGATGCACATTCAACTT
CTTCTGATGATGTCAGAGTTCAACTGTACGACGAAATAAGCGACATTGAA
ACTGAAACTCAGGACGCAGaaagtcaaattactcaattcacTGATAACTA
TACTGACATTATAGATACTCAGAGTCAGATAACTGAAACGGACACTCAAA
TAACTGTTAACACTGAGAGTCAATTTGAGGAAACTGAACCCCTTCCTCAT
CTTTCTCCACCAAAAACACAACGTTCTGAATCAAGTTCAACAAAGGAGAA
CCGacgaaaatctttgaaaagattAAGAGCGTTTGAGGATTCATCCGATG
AAGAAGAACATAACGAAGGCGATCCTCCAATCAACGACAGCTCTTCTTCA
TCAACCTACGATTTACCCGTTCTTAAAGGCAgcgttaaaactaaaaaagt
tgcTTCGAAATcttctgaaatttcaaaatcgtTTTCGCCAAACAAGAAAA
GTAAGGAAGAGCGAACAGAACGGATATCGACTTCCGAAAAgagtttttat
tcaaagaaGTGTGTCTCTCGAGAGAAAGTTCCTTCGAAACAAAAGAAGGG
TCCATTGGCTGCCAACAGTAAACAACGTCCTTCCAAAGAGAAAGTTCTAA
CCGAATCTTCAACCAAAGAGAAAAAGCAATCACAAAAGTGTCAACACTCA
CACAGCATAACTTCCAAACTGCCAAGAAAACGCCCATCGCCGCCTTCAGA
CACCGAATCTAAATCATCTGCTTCTTCGTCGAGACCGCCCCTCAAATCCT
TGCTCCATCGAAACAAAACGTTGTCAACCGACAACAGTACGCCTTCAAAA
CGATCAACTAACTCTTCAACAATTACCAAAACGCCATCAAAAAAACGAAC
GGAGAGTTACCGTAAATCACAAGTCACCAAACCAACAAACACTCCAGCCA
AAGTTACCGATGCTCAAAAATTCTACCGTGCCGACCAGATTCTACGTCAA
CGCAAACGACAACAACAAAATCGAAAGAAATCTACTACGTCGGCAAAAGC
ACCTGCTGCAACGCCTGCTAAAAACATTTCCAATAAAGATAAACAGCAAA
TAGATTTCGATATATATTCAAAATCGAAACAACAAGCCATTAAACCAACA
TTAATCGAGAAATCCCAATCGAACATGAAAAAATTCGATCTCGCCAAAGA
AGCGTTTGCACCAGTCGAGAAGAAGCAAAAAACATTGCACCTATCAAAGC
AAACGGATAAGCCTTTTAAGGCACCGAAGCCTCTTCTTGCTCCAAAGAAG
TTGGCACCTGTTGCTATGACAGCTGCACCTAAACCGGTCGGGTACGCGCG
AGAGAAGCCGGCTACATTATCGGCATCGTCAGATTCGCCTTCAAAAAGAG
GTGAAATCCGAAACTTTTTTGGCGTTTTCAATGAGTTGTTTGGTGATGTA
GCGGCTACCCGAAATGATAGCAATGACTAAATTTTCAACACGTATACCCA
ATGGGTGATGCGTGCTCTTTCGATGGATTGacattaaaaggaaaaaaagg
aaTTGATGAATATTCCATCTTTAAAAGTATTTGGATATTTTTCAGCTAAT
GCGAAAACTAGCGTACGCCTGATTACCCATGGCCCTGATATCCTCATACT
TTTAGGATGGGTCTTCAATTTCTAAAATctcattttaatgaaaagtgAAC
TTTATTAACTTTAATTTTATTTCGTTATACGAAATTTTGTATAGACTTTT
AAATATATTTG
Run BLAST on NCBI

transcript from alignment at sc0000279:214194..225498+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017915 ID=TCONS_00017915|Name=TCONS_00017915|organism=Clytia hemisphaerica|type=transcript|length=11305bp|location=Sequence derived from alignment at sc0000279:214194..225498+ (Clytia hemisphaerica)
GAATGGAGCTAACAACCTTTTATTTAGAAATGATTTAGCGTGTAAGTTCA
AATTTTATATCCGCGAAATTTTCAATTCGCGTGTTTTTTAGGCTTTGCTT
TGATACGTATCTTTTAAAGgaattgtttttaaataagagtgatattgttt
gcttactcatcaattatAATTTAcgagctttttcacattggtcataaaga
agaaaagaaaactattttttgcttatattagcataatataacaataggca
gacactgtcctgatatggaatatgtgtctgatatgaaacggtcgaacact
tatgtaaaaataaaaccttggtTTTGGTCACTTGaaacaaatttcatcaa
aatgaaatttaaacaagTTGCAGTTCGATTGGTAAACtgtttcaacaaaa
caaaacttttgtcACCGTCACGTAAGTAcaatgaaaagttttaaaagttt
ttggtaaCTGTTTCTGTCCAAGAACAGttgatgaattttttgaatcattt
tttgttttcgcaGAAACCGATTTTGGGATATGGGTTTTCTTTTCGTTGTT
CGAGGTGGGCCCACTagtaactttttttttgttattattgttgACTCTTT
GCGACGTGTCCTTCTTGTTGCTCCTTCAATTCATATCTGGCTTCTTCTAG
ATACTTTCTTCTATACTTTTCTGATATTTGATTATTCGTCAATTTTCGAA
ACATTCTGGTCACGTTTTTTGCAGGGGAAAGAACTTTTTTTCTGAAGGTA
AATTCCTGAAGGAATTATTGATCAAAGTCCGAAACGTTTTGGCTACGTTT
TCTCTAGGTTTTTCTTAATAGAAAGATGTCTATATTACAATACTTAAATC
TCATCAAGATAACCTTTTAAAGCGATCAAAAGAGTACTATAAAGGTCTCC
TTTTAGCTGGATCGAAAgtgtgtttttaagtttttatagACCATATTGAA
TTATGAAGTTTTGCTGGATtgcaagtctgacagtaaattttttttatctt
tttataattttgaatcGCATGCATTTcgcatttttgattttttttataca
tCATTCCAACTTCTCAGGCTCATTTCCGGGTGTTGCAGCAAAATAAGCCA
TGAAACTGCATGAAATCAATCTAAAGTGAACAGTAAGCGTCTAACTAATA
TTTTTGAGGCACATGCTGTCGTTTACAAATCGAGTACGTCCCGGGCCTTG
GCATCAAAATAAGATTTAATTACTCTGAATTACTCTTTATAAAGCACACA
GGCATTAGTATATACaagcttttatttgaaatcNGATTTAATTACTCTGA
ATTAATCTTTATAAAGCACACAGGCATTAGTATATACaagcttttatttg
aaatctttcttcaataaaaagataAGTTAGATGAGGTTTAATACAACatt
ttttaaagcacttttGATCATTGTGCTCCTGATATTTTGTGTTTCTCGAT
GTTTACACGAACAACAATATATTATGTAATGAAAATAAATGATGATCTGG
GTACTATTTGACTATTTCTCAATTAGACTAGGTTTCAGGTTTCTTCTTCA
AACACGACGTTAAATGTATgttaaagaaattttattgctaatgaaaatat
tttatcaagGACCGTGGTATTTCTTGCTTTCTATAAAAGCACTTAAAAAG
ATTCCTCTCATGTCGCTAAAATGTTTTCCTAAAGTTAGCTTTGTGCATcg
aaatttaagattttgcttATAAATTTGAAGTTATCTGAATATTTACAATG
ATTGATTCATTCAAATTGCATTATAAAGAGGagtgttttgaaaaaagaaa
aatttgtaacAAAACGCAATTTGATGCTCATGGGAAATTTTGACTGGCAT
TGACATTTTCACAGTTTATTAAATGTTTGCCCTTTTTTCCCgcctttttt
atgaaaagataAGATGTaacatattgaaaataaaaccatACTGAAAACCA
TAAGATTGTAAATTAGCATGGCGAAATTTTCGAATTATTGTCACATTTAT
TTGTTATCTATCGTAGCAACAATGCAAATATTGTACTTTTTATGGCGAAA
TTTTTGATTTACTACCATGTTTATTTGTTATCTGTCTTAGTAACGATGcg
aaatttttgatttaataCCACGTTTATTTGTTATCTATCTTAGCAACGAT
GCAAATATTAAGTACTCGTTTCGACGAAGTGAAATGTTTGTACACCACTC
GTTGGCCTGTTTCAATATTGAATTTTGTGATTTAAAAAAGCTATCAATCA
AACGATTTTGAgggttaaaaaatgttattcgTATCCCTTGCGCATGGCAT
CTGAATTGAAATTTCGCGTCTATTGTTTAAATAACCTGGGTACgagtata
aaaaaaataaaaatatagcCTTATTTAGATGTGACTCTTTATGCTGATTC
TAACCATTGTGTTACGAAAAACCACTTTAAAAGTACTGCACATCTTGAAT
TCAAGTTATATTTCAAGTGGTTCTCACGCAATGAGGAATGCATTCTTTAA
AATGAGCGAGTGTTGTGTCTTTTTGAATTTATCGTTAACTTTTAATGGTA
gttgtttttttggaatcttttgattttaccCGGAtgttttttgggatttt
tacAGTAGattaaggcgagaccaatttgattaattgttctacgggcccga
ccgaccctgaaatggaaattaaataaaccagctgcgctggaaagtcagcc
caaaATGCTTAGAAGGCTTAGAATGATTAATAGGAAGTACAGATAAGAAA
TCTGGCTTTGTTAAAATCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNAACCAGCTCccaaaaaatgttgttaatGC
TAAGTCAATCAAAGCATTTAAAGAAGAACTGACTCAGGCATGGATAAAGC
ACCCGTTACGTTACGATTCAAGATGATCACTTTTGTAATCATTATGTAGA
TAgaccggtttagaggccctagtgtgcctggactgtaaatcctttaataa
ataaataataaataatcccgaaatcctgtttcccgaaaataatccgaaat
cggaattaaaatgaaagtcttaacgacgacgacgagcgggaaaaaaatcg
tcgaaccgatttgaagagtcaccggggctgactaataagattgattttgg
tagtacaattttattttcattgctttacagattgccaaatttttaaaata
ttgctagtttttgtaagattttaagaattttatgttcaatttttcatttt
atccatgaattcgacttttttgtgtctttttattttctatttcgcatttt
tgttaagaagtagtagtttttgctgtctttttaggagattttatatggga
aaatctacttttatttttattttttcgccgaccgaccgaccctattttat
GGATAGCTTGGTTCTCCTTGCACTCTATAGACTGTGTTGAGGAGCAAGCT
TTTCTTATCCACTCATCACAAGCGATTAGGTAAAGCTCGGCCCTTAGTGT
TTGGAGCACTCTGGTTCTGTTGACAGCAACAGTTTATGTTCTTATGTTCG
CTTATTCGAGCTTATTCGAGCTGCACTAATGAGTCCTGGAAGATACGTTT
GTGGATAAATATATAATACATtacattttctgattttgataaATTCACTA
ACCTTAAAACGTAAACCTTCAAGGTTTTAACCTAACACCTTGAGTGTACA
CTTTCTGCACAATACAGTACTGGCATACGGCGTGGATTTGAGGAAAGAAA
TAATGTTTATTACTTTATTAATTTTATCTGAAGAATTCCAAattgctttt
gaaaaattttaagttaTTTCAAACATGGTTTATTTTTCCAGGACTTTTCA
ATCACCACAAAACTTAGTTTTATGGACACCCTGTGTGTCGTGTCTTGTTA
CTGTGCCCAGTGTGAGTTTAACCCTTAATTAAGAAAGTGAAggagctaat
ttttctttgcTAAATTTTATTGCCAAACTCGAATTGTTCCCAAAATTCTA
AATACTTTTGATGGTAGCTTTAAGATTTAAAAGAGATCTATGCCAAATCT
CAACCACAACCTTTTAGACAACATTTTAAAGACTTACCTTATATgaacta
cacgctttttatgagaacaaaatCTATaataacataaggcttcgatggcc
aaattcttaagaacattttcagtcTTTGGtcggactctaaaacatctttt
ttctcaggaaaatggacaaaaatactcaaaaaattgtgaaaataagatta
TGCTATATAGAACATTTTTagcttttaaactttaaaatccaaaaagtaaa
gaacatctaaatgctttaaaattttttggatgttttataaAAATCGTGTA
ATTTTTGCTCACTTGGCAAATTTAATTTGGCCAAATGGCCAAAGTTAGTT
AAATTTAGTCCctccaaaataaaaattaaagattttttgaaggatATTTG
CATATAAGTTCTCAAGTTGATTAGTGAGTCAATTACTTACGGTTTTTCCG
GTTCTGTTTGATCAGCTGTCTTTtggttgaaaataatttttttgtagtCT
TTCAATTTCACTTCGATAGTGTAAAAAGCTGAATAAACACGTATAACATT
TCAGTTTAAAtcttttcagaatttgaaattttttgtgtttattttttaaa
tatttggtTGTCGTTGGTATTATGCCATTATATTCACCTCTTCAAAACTT
TACTAGTatcttttgtttcaaatttcattcatttgaCGTAATCAAAGATC
GTATTACctcattacacgtttttttttataagaacaaactatataagaac
ataaggcttcgaggcccaaaaatttaagaacattctaagaacattctaag
gctttggagacNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNTAAGTGTATAAATTCTACCGTGTCTTATTC
TTTTCCTTTCTCCCTTCGATCATTGTCCAAAAAGGTTATCTGTCTCGGAA
GCATCTgttaatttaattaaaaaggAGATCTTTCGTAGAGAATTGATCGt
taaaatatttaacttttgtAATAGTTTTGGAATTGAACACTCTTctaatt
tgtaaattttactGAGGTTTTTTTATTGAGAGGTTGGCAGAGtgtcattt
tcatatttttctagatttttaaaatttcgaatCTTTTGAATATTTGAAGT
TATATTTATAGTTTTGGTAAACCTACCTCATTGTGAGGCGTGTCTTAGGA
GGTTAGTATCTTATTTCTATAAaggttgaaataaatagaaaggtaaataa
aatgtCGTCGTCGTGAAAATTAAATGTTTTCTAcgggaataaaaggagct
tattttaAGCAGTGTCTTCATGCTAAGTCGAATAaattaaagctactttt
ttacgcAACGGTATCTTCCAAACAAAGATGGaaagttgtttcgagatgtT
ACCTCGCACtctattgcttttgtaaacaaaaaatagcaaggttgatttcg
agcaaatttacaatcgaatgttttgattataagatagACTGTGTTCTATT
tattattgaaataaaaacattccAAAGAGTATCACTAGATGTCCCTTTGA
ttgagaaatgtttttttttattcaacatattttcattttttcaaaagcgt
TCTCTAATTttgtcgcacttgtttttattacatcagcatcatcagacctt
taaatcaaaacaaaacctttaattttccCCAGGGCGTTGAATTTAACTTG
AAAACTATTCTACACATGTTTACAGTATATTGATAGAAACTTCTATAAGA
AAATCATCTCGAGATTTATGATTTACAAACAATGCATTATGCGAACAGCG
AATTTTTTTCCAGAGAAACACGTTTCGCGAGTTCCGAATTTTGCGATTTC
CACTTTCTGGAATTTTTCGCCTGTATCAAATTTCGCCATTCACTAATAtg
gaaattttaaagaaatgagttaaaaaacaataaaaaggctaattttgctt
agaaaacacttgatatttaatatttgaaaagaaattgtcttttaaaaaag
aattgtctttttttatcttttcaattCTAATTTTAGAAGCTATTTATTGC
GACTTTGACAGGAAGTGATTTAGAAATAATCGAGACTGCTGATTATTATA
AAATTATGTAATCTTTAATTACCTTTTTGTAGCACGCATAAATTGAGAAA
TTTTACCTATCGAATATTCAACGTGCTCAAAAATTGTCGATGTCCTTTTA
GAGGGGTTTGTTGTATAtagattttttgtttgaaatgattTCATAGAATA
TGacaatttgatattattttggACTTTGCGACTGGTTACAATATACAATT
ATACAACAGATCGAAATGAGTTGACTAAATCACTACTATCATTTAGCTGA
TACCTGGCGAGAAATTTCCATTCCTTTATCTCTGCATGTTGAAAGTTCTT
TCACTTCTTTGTGCTAGGGATGTAGTGTGGTCTGCTTCCCACGAGGTATC
GGTTATTTGAGCTTGATTTGTTGCTGGTGGAAATAAATGTTTGATGGCTT
CTGGCATCAGCGCTGGGATATGGAattcaataaaataaattatcaCAGCA
TTGATTTAGTCCAATTCTGTCCCGTCAGTATCAGCTACTTGCTTTAATCT
TTCGGAATGGAACTATCTTTTATGTGTCTTGACCTTCTGTTTGTTATTTT
AAAGAATGTATTTTTTTTACGTCTTGTTTTTTTAGTGAATTAATCAAAGA
ATTACACGAAAAACAAACGACAATCAACTTTCAATGGTAACCCATTCGAC
ATGGATCCACCATATGGACTACCAAACATTCAAAATGGACATCAACTCTC
TCAAGAGCAACTATCAAACTTAACTCAAGCATCACGACAAGCGTTGAATC
AGATCCATGGTCCTCAAAACCCACCACCTCCCATTTATCATCCATTCCCA
CCGCCTGGCAATGGTCCCTTCTTACATCCAATGTTTCACCAACAATTGCA
ACCACCTCCGAATTACCAACCTATCGTTTATGGAGATCTCAGTTTCCCTT
ATTTCGTTCCTCCTCCTCCTTTACCAGTCCAGCCATCCCAACACCAAGTC
AGCCAGCAGTCAAATGCTCGTAACCAGCAGCAGATCTACAAGTACATTCC
AGATCCACCGCAAAATCACCACGCAGTCCGTCACCAACTAAATCGTAAAC
AAAACCAACCCCAGCACCAGTCTATTCGTCAACAAACCCAACCTTCTAAA
CATTTGAATCCACAACAGAACTCTCAACTCCCGAGCTCCAATCATCCGAA
TCTGAATCGACAACAAGCTTCAAACTCGTCAAGAGAAAACTCTTTTAATA
CACGAACAAACTATCAAAATCCCCCATCACTACCAACAGTTCAACGCCAT
TCCTCATCTGAAAACACACGAGATTCCCAACCGTTGACCAACAGGGCTGG
TCAGGATCTCCAGAGTGCACTTAGAAACGAACTGAATACTATTGAACGAA
CTCTTTCCCAATTGCAAGAACAAAAAGACCGTTGTATCCAAGAGTTTTCC
GTTATTCGACGACTGTACGAAGAAGGACAACACGTTCGCGGTGACGTAAG
TTCGTCAATTGCCACATTAATGCAAGAGAGAAAAAGAGtttctgaaaaat
acaaaaaaattgagaacaacttttcttatttttccaaaagaaaagattta
attTTGGGACTGCTTGAACAAAATGAAACGGCTACTATTCCTTCCATTTC
GAATCTGCAACCACAACCAATAGCAAACCGGAAACCACCTCCTCTAAGAA
GTCGACACAATAGCTTATCGATGCAATCCAGCTCTGGAAACAGTGATCTA
CTAACACCTCCCCCAACACCACAATCACCTGATTCGTCAGGGATGAGATC
ACCGCATTTCCTTCTGCAGCATGTCGAACAAAACCCTAAACCAATGTCAG
AACCACCTCCCTTGAAAACTGAACCTACAGCAAAGGAAGAGACCCAACCA
TCTTCGACAACTGTATCTAAATCTAGACTTAAACGAACCACAATCTCCAC
GTGTATCGATTTAACCGAGGAGGACGACAAAGGAAATGAATGTAAACCTT
CAAACGCCCAAACTGTCAGCCAAGAACCTTCTCAACCCGTTGTTAACGAA
GAGCTATCTAGAACTATCGACCAAGTAGCAGAGGAATTCTCCCAACCTAA
TTTAGCTGTTCTCGAAGCAAGAGAACTTCCAGAAATTAGTGAAGTTCTCT
CTGGTAATGTAACTTTTGGGAGTGCTGAGTTTgagaaaattgttcaaaat
gaaattgacaaAGTGATTGAACCAGGGACAATAGAAGATGTAATTGTAAA
AGTAGAGCAATATTTGAAGGAAGAAAGTGATGCACATTCAACTTCTTCTG
ATGATGTCAGAGTTCAACTGTACGACGAAATAAGCGACATTGAAACTGAA
ACTCAGGACGCAGaaagtcaaattactcaattcacTGATAACTATACTGA
CATTATAGATACTCAGAGTCAGATAACTGAAACGGACACTCAAATAACTG
TTAACACTGAGAGTCAATTTGAGGAAACTGAACCCCTTCCTCATCTTTCT
CCACCAAAAACACAACGTTCTGAATCAAGTTCAACAAAGGAGAACCGacg
aaaatctttgaaaagattAAGAGCGTTTGAGGATTCATCCGATGAAGAAG
AACATAACGAAGGCGATCCTCCAATCAACGACAGCTCTTCTTCATCAACC
TACGATTTACCCGTTCTTAAAGGCAgcgttaaaactaaaaaagttgcTTC
GAAATcttctgaaatttcaaaatcgtTTTCGCCAAACAAGAAAAGTAAGG
AAGAGCGAACAGAACGGATATCGACTTCCGAAAAgagtttttattcaaag
aaGTGTGTCTCTCGAGAGAAAGTTCCTTCGAAACAAAAGAAGGGTCCATT
GGCTGCCAACAGTAAACAACGTCCTTCCAAAGAGAAAGTTCTAACCGAAT
CTTCAACCAAAGAGAAAAAGCAATCACAAAAGTGTCAACACTCACACAGC
ATAACTTCCAAACTGCCAAGAAAACGCCCATCGCCGCCTTCAGACACCGA
ATCTAAATCATCTGCTTCTTCGTCGAGACCGCCCCTCAAATCCTTGCTCC
ATCGAAACAAAACGTTGTCAACCGACAACAGTACGCCTTCAAAACGATCA
ACTAACTCTTCAACAATTACCAAAACGCCATCAAAAAAACGAACGGAGAG
TTACCGTAAATCACAAGTCACCAAACCAACAAACACTCCAGCCAAAGTTA
CCGATGCTCAAAAATTCTACCGTGCCGACCAGATTCTACGTCAACGCAAA
CGACAACAACAAAATCGAAAGAAATCTACTACGTCGGCAAAAGCACCTGC
TGCAACGCCTGCTAAAAACATTTCCAATAAAGATAAACAGCAAATAGATT
TCGATATATATTCAAAATCGAAACAACAAGCCATTAAACCAACATTAATC
GAGAAATCCCAATCGAACATGAAAAAATTCGATCTCGCCAAAGAAGCGTT
TGCACCAGTCGAGAAGAAGCAAAAAACATTGCACCTATCAAAGCAAACGG
ATAAGCCTTTTAAGGCACCGAAGCCTCTTCTTGCTCCAAAGAAGTTGGCA
CCTGTTGCTATGACAGCTGCACCTAAACCGGTCGGGTACGCGCGAGAGAA
GCCGGCTACATTATCGGCATCGTCAGATTCGCCTTCAAAAAGAGGTGAAA
TCCGAAACTTTTTTGGCGTTTTCAATGAGTTGTTTGGTGATGTAGCGGCT
ACCCGAAATGATAGCAATGACTAAATTTTCAACACGTATACCCAATGGGT
GATGCGTGCTCTTTCGATGGATTGacattaaaaggaaaaaaaggaaTTGA
TGAATATTCCATCTTTAAAAGTATTTGGATATTTTTCAGCTAATGCGAAA
ACTAGCGTACGCCTGATTACCCATGGCCCTGATATCCTCATACTTTTAGG
ATGGGTCTTCAATTTCTAAAATctcattttaatgaaaagtgAACTTTATT
AACTTTAATTTTATTTCGTTATACGAAATTTTGTATAGACTTTTAAATAT
ATTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010044XLOC_010044Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017915-exon-sc0000279-1491911889:214194..214234TCONS_00017915-exon-sc0000279-1491911889:214194..214234Clytia hemisphaericaexon
TCONS_00017915-exon-sc0000279-1510915933:214194..214234TCONS_00017915-exon-sc0000279-1510915933:214194..214234Clytia hemisphaericaexon
TCONS_00017915-exon-sc0000279-1575043694:214194..214234TCONS_00017915-exon-sc0000279-1575043694:214194..214234Clytia hemisphaericaexon
TCONS_00017915-exon-sc0000279-1491911889:222129..225498TCONS_00017915-exon-sc0000279-1491911889:222129..225498Clytia hemisphaericaexon
TCONS_00017915-exon-sc0000279-1510915933:222129..225498TCONS_00017915-exon-sc0000279-1510915933:222129..225498Clytia hemisphaericaexon
TCONS_00017915-exon-sc0000279-1575043694:222129..225498TCONS_00017915-exon-sc0000279-1575043694:222129..225498Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000279supercontigsc0000279:214194..225498 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.71737	1.06395	0	5.96273e-06	0.000732207	0	2.50813	1.67091	1.0133	1.6302	0.676408	0.313039	2.45115	4.59019	4.11751	3.75695	1.70564	4.21142	1.68159	2.76961	2.34451	2.3998	3.34112	2.08896	1.50407e-07	0.338449	12.6099	7.51057	1.56547	0.00016437
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017915 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top