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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00017738 ID=TCONS_00017738|Name=TCONS_00017738|organism=Clytia hemisphaerica|type=transcript|length=844bp
AATAGGTTTATTAGGTCCAGTTCTTTCTCTTGGTCTATCACAATACCGGT
CAAGCATattacttttgaaaattgaagtaCTATCTTCAGGCAACTCATTA
ATTTCATCTTCACTAAGGCACATTCTAAATCTCTTTTCTGGGACATTAGT
ATTTGCAAAAGTTACACCTGGATACAGTTTACGAAGCCATAGCTGTGGCA
TACTGAGATAAACTGCTTCTTGCACTGAAACTTCTCGCTTTGACACATAG
GCATGCGCaacagatttcatttgttcataTTTGTCACCGCCATTTTCAAA
AGCATCTTTAACAGCTTGGGTCATAGCATGAGATATTTCATCTTCAGTTT
TAGAAAGATATGCACACATGTAAGTTGCAGCTTTGTAATAATTAAGTACT
GGTTGAATATCCAGATTTGCTTGCCAAGCTTTAAGACCTTCTTCAAAGAG
GTTTTACCAAAGCATGCATTTGTATTGCGTTTTAAGTAAATGTGAAAATT
CTTATCTTCAGATACAGAGAGAGCATATTCATAATCTTCCTTTGGAATGT
CTAATTCAGCTAGGACTTCATTGATGGTAGGAACTGGATTGAAATTTTCT
CCATCGgggttgaaaaagtttcttttatcAGGATTAAGGTTCTCATTGAT
GTAAGTCCTTACTTTTGTCAAAACTTCTTTTCGCAGAGCAAGTATGGCTT
CTCTTTCCTCATGTGGTAGTTCTTGTGGCAAGGGCTCAGAAACTATTGTT
TTCTCCgaaaaaaatttaccaaaataaaaCCTACAGGGagtgtttttata
tttacggcAAGTTTTTGAATGGCGGTGTAGTTGGTATGTCTTCA Run BLAST on NCBI transcript from alignment at sc0000274:24423..25371- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00017738 ID=TCONS_00017738|Name=TCONS_00017738|organism=Clytia hemisphaerica|type=transcript|length=949bp|location=Sequence derived from alignment at sc0000274:24423..25371- (Clytia hemisphaerica)
AATAGGTTTATTAGGTCCAGTTCTTTCTCTTGGTCTATCACAATACCGGT
CAAGCATATTACTTTTGAAAATTGAAGTACTATCTTCAGGCAACTCATTA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACTATCTTCAGGCAACT
CATTAATTTCATCTTCACTAAGGCACATTCTAAATCTCTTTTCTGGGACA
TTAGTATTTGCAAAAGTTACACCTGGATACAGTTTACGAAGCCATAGCTG
TGGCATACTGAGATAAACTGCTTCTTGCACTGAAACTTCTCGCTTTGACA
CATAGGCATGCGCAACAGATTTCATTTGTTCATATTTGTCACCGCCATTT
TCAAAAGCATCTTTAACAGCTTGGGTCATAGCATGAGATATTTCATCTTC
AGTTTTAGAAAGATATGCACACATGTAAGTTGCAGCTTTGTAATAATTAA
GTACTGGTTGAATATCCAGATTTGCTTGCCAAGCTTTAAGACCTTCTTCA
AAGAGGTTTTACCAAAGCATGCATTTGTATTGCGTTTTAAGTAAATGTGA
AAATTCTTATCTTCAGATACAGAGAGAGCATATTCATAATCTTCCTTTGG
AATGTCTAATTCAGCTAGGACTTCATTGATGGTAGGAACTGGATTGAAAT
TTTCTCCATCGGGGTTGAAAAAGTTTCTTTTATCAGGATTAAGGTTCTCA
TTGATGTAAGTCCTTACTTTTGTCAAAACTTCTTTTCGCAGAGCAAGTAT
GGCTTCTCTTTCCTCATGTGGTAGTTCTTGTGGCAAGGGCTCAGAAACTA
TTGTTTTCTCCGAAAAAAATTTACCAAAATAAAACCTACAGGGAGTGTTT
TTATATTTACGGCAAGTTTTTGAATGGCGGTGTAGTTGGTATGTCTTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00017738-exon-sc0000274-1575043694:25283..25371 | TCONS_00017738-exon-sc0000274-1575043694:25283..25371 | Clytia hemisphaerica | exon |
| TCONS_00017738-exon-sc0000274-1575043694:24423..25177 | TCONS_00017738-exon-sc0000274-1575043694:24423..25177 | Clytia hemisphaerica | exon |
| TCONS_00017738-exon-sc0000274-1510915933:25283..25371 | TCONS_00017738-exon-sc0000274-1510915933:25283..25371 | Clytia hemisphaerica | exon |
| TCONS_00017738-exon-sc0000274-1510915933:24423..25177 | TCONS_00017738-exon-sc0000274-1510915933:24423..25177 | Clytia hemisphaerica | exon |
| TCONS_00017738-exon-sc0000274-1491911889:25283..25371 | TCONS_00017738-exon-sc0000274-1491911889:25283..25371 | Clytia hemisphaerica | exon |
| TCONS_00017738-exon-sc0000274-1491911889:24423..25177 | TCONS_00017738-exon-sc0000274-1491911889:24423..25177 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000274 | supercontig | sc0000274:24423..25371 - |
Blast
The following BLAST results are available for this feature:
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