TCONS_00017709 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017709
Unique NameTCONS_00017709
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length110

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017709 ID=TCONS_00017709|Name=TCONS_00017709|organism=Clytia hemisphaerica|type=transcript|length=110bp
GAAATATACATCATCCGGGGTTCGAATTTATACCGTTAagttgcatcagt
ggagggaaacttgcatagccgtCAAATGACTGACCTATCCTCTGTTCGAC
CGCATTCAAA
Run BLAST on NCBI

transcript from alignment at sc0000273:52229..52338

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017709 ID=TCONS_00017709|Name=TCONS_00017709|organism=Clytia hemisphaerica|type=transcript|length=110bp|location=Sequence derived from alignment at sc0000273:52229..52338 (Clytia hemisphaerica)
TTTGAATGCGGTCGAACAGAGGATAGGTCAGTCATTTGacggctatgcaa
gtttccctccactgatgcaactTAACGGTATAAATTCGAACCCCGGATGA
TGTATATTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009909XLOC_009909Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017709-exon-sc0000273-1491911889:52229..52338TCONS_00017709-exon-sc0000273-1491911889:52229..52338Clytia hemisphaericaexon
TCONS_00017709-exon-sc0000273-1510915933:52229..52338TCONS_00017709-exon-sc0000273-1510915933:52229..52338Clytia hemisphaericaexon
TCONS_00017709-exon-sc0000273-1575043694:52229..52338TCONS_00017709-exon-sc0000273-1575043694:52229..52338Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000273supercontigsc0000273:52229..52338 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017709 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top