TCONS_00017578 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017578
Unique NameTCONS_00017578
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3421

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017578 ID=TCONS_00017578|Name=TCONS_00017578|organism=Clytia hemisphaerica|type=transcript|length=3421bp
GAGCTGacttttttatcagattttatttATTCGCCAGCgtgaaattattt
tgtttttcttaaatcagAAGAAAATAATAAGAATGAATCTTGTAATATAT
AATGAACAAAACTGATCACCAAAAACATGATAATGAAGAAGAAATGACAC
CTAAAGAAGTCCCTAATCAaacagccaatcagattgcaagTTCTCAACAA
CCAACCAATCATATTGAAGCTTCAAACAATGGTCATGACATTGATGTCAT
GGTAACAAATGTGATTAAAGATGGTGGACAAGGGAACGGTCACAATATTT
TGAAGAATACATCACCTGAGAAGACAACTATCTCGTCGTCAACGAGTgac
gaaaatattttcagcagaATCGAAGTGGAAACAAGATCAGATCTCATTCA
ACAGaCAGTCAAGCAAATAGTGCAAGAGAGAATGGAGAAACtggaaaata
atttatttgaaGGTTTCAAGAAAGAGCTGAAGAGAATCAATGAAGAAAAT
GTGAATCTGAAGAGGAGGGAACGGACATTAAAAGGGCGAATCCAACTTCT
TGAAAGTAACCTAAAAGTGTCAACTGACAAATCCACCAACACCGAAGAAT
GCTCGTTaattcagaaaatgaaaattggaGATGAAAAAGCTCCTACAAAT
GAGCAAAAAGAGAGTGAAAACGAGGGCGATGAGATTTCAATTTCTCCTCG
AACTCGTATCGACCTTGCTGAAGATAAAATTCTACCTCTAACTTGTTCAC
CAAATTCTTCTAGCTCTTTGCGTGACGAAAACGATATCACACCTCTGGCG
CCCTCTGACGATAATTCGACCGTTATTGAAGTGGTAGAGACGTCACTGAG
CCGTGAAGAAACAAAAATAGAACTTGAGAACAGTGATGAATTGGTTATAG
ATGAGAAAATAAATATAACGGTTAAGGACAGTTCAACTGAAGAAAGTTGC
GTTGAAAAGACTTTGTCTATAAGCGATAAACCAATGACAATCGAACGTTT
TGATAAAGGAACAACTActaaagaaaataaaggaaCTTTCATAGAGGTTG
GTGATTTGAAGCATAGAGATGAAGAACTGGTCAATCAAAACGGTGCATTT
TTTCGATCAGCTGATCAGAAAGATGATAGATTAACACCTAGAGACCATGA
TATCGCATTAGCTAAACCAACCAATCAAGGTATTGCTTCAAATGAATCGA
CCAATGAGATTGAGGATATGTTATCACCTCGAATTTCTACATCAACATCA
TCCATCACTGCATCTGTGGAGACTGCGAATAATAATTTTGTGCCGGCAAT
GTTTCGATCATTGCCAACAATGGAGGTTAAACCATACCAACTAACAACAG
AACCTGAAAGGAAAGTCGAccaaattgtcgaaaaatacAAAGAGAGAAAC
TTAACAGCCGATAGGAATCCACCAGTTTTAGAGCCATCCAATCACAATCG
TTCTTATGCAGAAGCATCCAATCAAAATCATGCTTTTATTGAACCAGTCA
GTCAATACCAACCTTTGACCAGAGCTGTCAATCAGCAACCACCTTTCTCC
ATTACTTCCATAAACCCGAATGTTTCCATGGACAATACACCGAGATACAG
AATGAGAGGTCCCTCAAAGCGAGCCGCCAATTCAGAAGTATTCCCTGAAT
TTCAACATAAACGTAAACCACGTGTTGGTCGCCCACCTTTGAATCGTGGT
CCACGGCCCCGGCACGTCGTTCGGCCGCACGAGTACCAACCGCCGTGGTA
TAATCGAGTGCCAGCAACTGCAGCTCAGCATCAACGTTTCTTCGAAGAAA
TGCGAATAAGGCACGCTTTTGAACTTCAACAATCACCTCAATTTAAAAGG
CTGTCTTCTAAACAAAAAGCGAAAGCTTACGAAGAAATGGCACTGGCTAG
TATGAAGTGGGAACAAGAATTTTTAAAGCAACAAGAACATTTACAACGAC
TTGAAATGCATCGTTCACCAAATGGTGCAGCTAATGCCAGATTCAACTTC
GATCCTGGTTACATGCAACAAGGCGCACCAGTGGAATATTTGCACCCATA
CCGCAATGGAAATCCACGATACCCATCGGAGGAAGTTTTGATTTCCCCAC
GAAGGAAAAATCCCCATGCTCGATTCCCACCTGAGGAAAGTTCAGTTTCA
CCAGCAAACACAAACACTATTCGCCAAAGTCTTAGGATTCCCGAGGAGGA
ATTATTAGCTCCTCAAggacaaaaacaacaaaatgggaATCCAAGAATTC
CACCCGAGAGAATTTTAGTTTCCCCAGGGGAGAGGACTCGCTTGATACAA
TCTTCTCCGAAATCTCCTTCTCTCCGTCAGCAATTGTCACCGAGGCAGTC
TGAGCAAAGGAGACAAGACAcaaacaataacaaacttttACAGACCACAC
CAGATACACCTATTGTTATACATTCACCAACACCAAAACAAGAGACATAC
ACTACGCCTCAAACACGCCCTCAGGAAAAATCACTACACTCCGAACGCCC
GTTATCACCAAAAACGAAATCAAGGAAACTCCCCATACCAGTCCCTCCAC
CTTTGACACTACATGAAGTCACAGAAGGACATCTTTTGACGCCTGTACAT
GATCGTAGAATGTCTGCTGATCCTAATATGAAAGCACAGCAACAGAACTT
TAAATTAGTACCTGTATCTTCAAGCAAGAAAAATCCGGCACAAATCATTC
GCTATCAACAAAAGAGTCAGGATAATCGATTACCAACTAACGATGATTTA
AGAAACAATAAAGCTCTGTCGAGATCAGATTATGATTTCCCAGCGAGCCA
GGACGTTTCCCGATTGCAACCCGTTTCTGTTTCGAAAATTCCGATTCCTT
GTTTACTTGATATCGATGGGCGTCCACCACCGACATACGAAGAGACACAG
CGAGCGCGCTTACCGAATATTTTGACCGAATTAACAACAGATGTAGAATC
AGGCGCGNGAAGAGACACAGCGAGCGCGCTTACCGAATATTTTGACCGAA
TTAACGACGGATGTAGAATCAGGGGCAGTAGTTTTGAAATGGAATTGCAC
TGAACTTTCACAAAATTGTCAAGATAACGTACGCGTATATTTATTGTTTG
CTTACCATTCAGATAACATTTACGCCCAGCCGCCCTCTGATATAGGGCGT
TGGATGCGAATCGGTGAAGTTGATGCTCTTCCACTTCCAATAGCTTGTTC
ACTTACAAAGACTTTTGATGgcaattgttatttttttaccGTTGTACCTG
TGGATAAAAAGGGTGTTTTAGGGACGATGAGTAATTTATGCGTTTTAGAT
GTTTCTAGGTAGTATTTGTCAGTTTTTTTATGACAAACTTTTGATATGGT
TGAGttgaagtcaatttcttttggattAAATAAATTATACATTATACACC
ACTTTCCAAAAACCAATTATC
Run BLAST on NCBI

protein sequence of TCONS_00017578-protein

>TCONS_00017578-protein ID=TCONS_00017578-protein|Name=TCONS_00017578-protein|organism=Clytia hemisphaerica|type=polypeptide|length=983bp
MNKTDHQKHDNEEEMTPKEVPNQTANQIASSQQPTNHIEASNNGHDIDVM
VTNVIKDGGQGNGHNILKNTSPEKTTISSSTSDENIFSRIEVETRSDLIQ
QTVKQIVQERMEKLENNLFEGFKKELKRINEENVNLKRRERTLKGRIQLL
ESNLKVSTDKSTNTEECSLIQKMKIGDEKAPTNEQKESENEGDEISISPR
TRIDLAEDKILPLTCSPNSSSSLRDENDITPLAPSDDNSTVIEVVETSLS
REETKIELENSDELVIDEKINITVKDSSTEESCVEKTLSISDKPMTIERF
DKGTTTKENKGTFIEVGDLKHRDEELVNQNGAFFRSADQKDDRLTPRDHD
IALAKPTNQGIASNESTNEIEDMLSPRISTSTSSITASVETANNNFVPAM
FRSLPTMEVKPYQLTTEPERKVDQIVEKYKERNLTADRNPPVLEPSNHNR
SYAEASNQNHAFIEPVSQYQPLTRAVNQQPPFSITSINPNVSMDNTPRYR
MRGPSKRAANSEVFPEFQHKRKPRVGRPPLNRGPRPRHVVRPHEYQPPWY
NRVPATAAQHQRFFEEMRIRHAFELQQSPQFKRLSSKQKAKAYEEMALAS
MKWEQEFLKQQEHLQRLEMHRSPNGAANARFNFDPGYMQQGAPVEYLHPY
RNGNPRYPSEEVLISPRRKNPHARFPPEESSVSPANTNTIRQSLRIPEEE
LLAPQGQKQQNGNPRIPPERILVSPGERTRLIQSSPKSPSLRQQLSPRQS
EQRRQDTNNNKLLQTTPDTPIVIHSPTPKQETYTTPQTRPQEKSLHSERP
LSPKTKSRKLPIPVPPPLTLHEVTEGHLLTPVHDRRMSADPNMKAQQQNF
KLVPVSSSKKNPAQIIRYQQKSQDNRLPTNDDLRNNKALSRSDYDFPASQ
DVSRLQPVSVSKIPIPCLLDIDGRPPPTYEETQRARLPNILTELTTDVES
GAXRDTASALTEYFDRINDGCRIRGSSFEMELH
Run BLAST on NCBI

transcript from alignment at sc0000271:30452..36627+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017578 ID=TCONS_00017578|Name=TCONS_00017578|organism=Clytia hemisphaerica|type=transcript|length=6176bp|location=Sequence derived from alignment at sc0000271:30452..36627+ (Clytia hemisphaerica)
GAGCTGacttttttatcagattttatttATTCGCCAGCgtgaaattattt tgtttttcttaaatcagAAGAAAATAATAAGAATGAATCTTGTAATATAT AATGAACAAAACTGATCACCAAAAACATGATAATGAAGAAGAAATGACAC CTAAAGAAGTCCCTAATCAaacagccaatcagattgcaagTTCTCAACAA CCAACCAATCATATTGAAGCTTCAAACAATGGTCATGACATTGATGTCAT GGTAACAAATGTGATTAAAGATGGTGGACAAGGGAACGGTCACAATATTT TGAAGAATACATCACCTGAGAAGACAACTATCTCGTCGTCAACGAGTgac gaaaatattttcagcagaATCGAAGTGGAAACAAGATCAGATCTCATTCA ACAGGTATTTGTTTGAACAGCATTGTTCTTAATACGGTCTCTTGTGCAGG TCATGAACACgcgacaatttcatgatttgtCCAAACTTAAAAGTGTCGCT TACATTACATTattcatagatttataaagcccgaagggctagatggcgta cttttgctgaaaagtgtgccgtggttaggtaggaaatcctgtctaaatca cgtgacattacaatagaatttcagcgcttgaccaatcagaagcttcgcgg gttttcgaaaacaatagctacaatatattttccgatattcacttcttTCT GTCTGTGATTGCTTAAAGCATGACATCTAGTCCTCTTCAGGCTTTATATC TATGGTTATATTCCCCAAGGTCTCTTTGAAACTTGGTGAACGTGTAAGTA AAGGTACATTCCACTCGTAGGTGCCCAGGACATCTCTGGTGGTCTATTTT ATAGTGACTTGGCAGAAGAATAATTCCAACTTCAAATTGAGATAAGGATC TACAGGTTGTTCATAGAAAAACTTACCTTCATTGTCTTTcaaaccatagt cattataaaaaaccctggtctggtaATGTATTGTTTTGGCTTTATTGTTC AACTTTCTTTTGTTGTAAATAAAaggcaagttgcgatttgcatacttttt tatCACGTTACCATAATcccctcttgggattggttagTTTTAtaaatcac atgatcaaaaactatgcaaaacaaatcaatttaAGGTACGCAAGCTCTAA CGGTTgataatacagggtgtccctaataaaagtatcgagtttgaacatgc gattgagtaaaaaagtttgtgtgtgttatcgctaaaatataataacgttc tccatcacataggctcattacaaaaggtagttacaacNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNaagagggagagcttaaaatac aattttgtgaatacacacttaaaactttctactcaatcgcatgttcaaac tcgatacttttattagggacaccctgtagaaagAAACTGAAGGAGAAGCC TTCCATACCGgggtttttataatgactatgttCAAACATCAAGTCAATTT CGACTCCAATCATGGCTTCTAAGCTATAAATAACCTTATGTTTTATAATC TGTATCTTTCGCAAAAAGAGAAATATTCATCCTCCAAGTACTAGTGAATG CTCGAAAACAACCTCCCTCAAAAAGTcattcatttttaatttcagaCAGT CAAGCAAATAGTGCAAGAGAGAATGGAGAAACtggaaaataatttatttg aaGGTTTCAAGAAAGAGCTGAAGAGAATCAATGAAGAAAATGTGAATCTG AAGAGGAGGGAACGGACATTAAAAGGGCGAATCCAACTTCTTGAAAGTAA CCTAAAAGTATGAcaatctttttgtctttttgtcttTCATTTAAAAACTG AGTTTATTAAAAATCCATACAGGGgagtggacgaaccttttcaaatccga aaaaaattcttgaaaatatttttatactcCCTGGAAAATGGCGAAATTTG TAAAGAAAACGTTGGAAATTTCTTTTCGTAGCTTAAACGTGACGGTGGac aaactaaaatcagtctaaaaaatggaatggcccaattaaCAGACAAAGGA AATGAAATTATAACAAATTTCTCTATTCCCTTCTTCAGGTGTCAACTGAC AAATCCACCAACACCGAAGAATGCTCGTTaattcagaaaatgaaaattgg aGATGAAAAAGCTCCTACAAATGAGCAAAAAGAGAGTGAAAACGAGGGCG ATGAGATTTCAATTTCTCCTCGAACTCGTATCGACCTTGCTGAAGATAAA ATTCTACCTCTAACTTGTTCACCAAATTCTTCTAGCTCTTTGCGTGACGA AAACGATATCACACCTCTGGCGCCCTCTGACGATAATTCGACCGTTATTG AAGTGGTAGAGACGTCACTGAGCCGTGAAGAAACAAAAATAGAACTTGAG AACAGTGATGAATTGGTTATAGATGAGAAAATAGATATACCGGTTAAGGA CAGTTCAACTGAAGAAAGTTGCGTAGAAAAGACTTTGTCTATAAGCGATA AACCAATGACAATCGAACGTTTTGATAAAGGAACAACTActaaagaaaat aaaggaaCTTTCATAGAGGTTGGTGATTTGAAGCATAGAGATGAAGAACT GGTCAATCAAAACGGTGCATTTTTTCGATCAGCTGATCAGAAAGATGATA GATTAACACCTAGAGACCATGATATCGCATTAGCTAAACCAACCAATCAA GGTATTGCTTCAAATGAATCGACCAATGAGATTGAGGATATGTTATCACC TCGAATTTCTACATCAACATCATCCATCACTGCATCTGTGGAGACTGCGA ATAATAATTTTGTGCCGGCAATGTTTCGATCATTGCCAACAATGGAGGTT AAACCATACCAACTAACAACAGAACCTGAAAGGAAAGTCGAccaaattgt cgaaaaatacAAAGAGAGAAACTTAACAGCCGATAGGAATCCACCAGTTT TAGAGCCATCCAATCACAATCGTTCTTATGCAGAAGCATCCAATCAAAAT CATGCTTTTATTGAACCAGTCAGTCAATACCAACCTTTGACCAGAGCTGT CAATCAGCAACCACCTTTCTCCATTACTTCCATAAACCCGAATGTTTCCA TGGACAATACACCGAGATACAGAATGAGAGGTCCCTCAAAGCGAGCCGCC AATTCAGAAGTATTCCCTGAATTTCAACAANTGTAAAGAAAACGTTGGAA ATTTCTTTTCGTAGCTTAAACGTGACGGTGGacaaactaaaatcagtcta aaaaatggaatggcccaattaaCAGACAAAGGAAATGAAATTATAACAAA TTTCTCTATTCCCTTCTTCAGGTGTCAACTGACAAATCCACCAACACCGA AGAATGCTCGTTaattcagaaaatgaaaattggaGATGAAAAAGCTCCTA CAAATGAGCAAAAAGAGAGTGAAAACGAGGGCGATGAGATTTCAATTTCT CCTCGAACTCGTATCGACCTTGCTGAAGATAAAATTCTACCTCTAACTTG TTCACCAAATTCTTCTAGCTCTTTGCGTGACGAAAACGATATCACACCTC TGGCGCCCTCTGACGATAATTCGACCGTTATTGAAGTGGTAGAGACGTCA CTGAGCCGTGAAGAAACAAAAATAGAACTTGAGAACAGTGATGAATTGGT TATAGATGAGAAAATAAATATAACGGTTAAGGACAGTTCAACTGAAGAAA GTTGCGTTGAAAAGACTTTGTCTATAAGCGATAAACCAATGACAATCGAA CGTTTTGATAAAGGAACAACTActaaagaaaataaaggaaCTTTCATAGA GGTTGGTGATTTGAAGCATAGAGATGAAGAACTGGTCAATCAAAACGGTG CATTTTTTCGATCAGCTGATCAGAAAGATGATAGATTAACACCTAGAGAC CATGATATCGCATTAGCTAAACCAACCAATCAAGGTATTGCTTCAAATGA ATCGACCAATGAGATTGAGGATATGTTATCACCTCGAATTTCTACATCAA CATCATCCATCACTGCATCTGTGGAGACTGCGAATAATAATTTTGTGCCG GCAATGTTTCGATCATTGCCAACAATGGAGGTTAAACCATACCAACTAAC AACAGAACCTGAAAGGAAAGTCGAccaaattgtcgaaaaatacAAAGAGA GAAACTTAACAGCCGATAGGAATCCACCAGTTTTAGAGCCATCCAATCAC AATCGTTCTTATGCAGAAGCATCCAATCAAAATCATGCTTTTATTGAACC AGTCAGTCAATACCAACCTTTGACCAGAGCTGTCAATCAGCAACCACCTT TCTCCATTACTTCCATAAACCCGAATGTTTCCATGGACAATACACCGAGA TACAGAATGAGAGGTCCCTCAAAGCGAGCCGCCAATTCAGAAGTATTCCC TGAATTTCAACATAAACGTAAACCACGTGTTGGTCGCCCACCTTTGAATC GTGGTCCACGGCCCCGGCACGTCGTTCGGCCGCACGAGTACCAACCGCCG TGGTATAATCGAGTGCCAGCAACTGCAGCTCAGCATCAACGTTTCTTCGA AGAAATGCGAATAAGGCACGCTTTTGAACTTCAACAATCACCTCAATTTA AAAGGCTGTCTTCTAAACAAAAAGCGAAAGCTTACGAAGAAATGGCACTG GCTAGTATGAAGTGGGAACAAGAATTTTTAAAGCAACAAGAACATTTACA ACGACTTGAAATGCATCGTTCACCAAATGGTGCAGCTAATGCCAGATTCA ACTTCGATCCTGGTTACATGCAACAAGGCGCACCAGTGGAATATTTGCAC CCATACCGCAATGGAAATCCACGATACCCATCGGAGGAAGTTTTGATTTC CCCACGAAGGAAAAATCCCCATGCTCGATTCCCACCTGAGGAAAGTTCAG TTTCACCAGCAAACACAAACACTATTCGCCAAAGTCTTAGGATTCCCGAG GAGGAATTATTAGCTCCTCAAggacaaaaacaacaaaatgggaATCCAAG AATTCCACCCGAGAGAATTTTAGTTTCCCCAGGGGAGAGGACTCGCTTGA TACAATCTTCTCCGAAATCTCCTTCTCTCCGTCAGCAATTGTCACCGAGG CAGTCTGAGCAAAGGAGACAAGACAcaaacaataacaaacttttACAGAC CACACCAGATACACCTATTGTTATACATTCACCAACACCAAAACAAGAGA CATACACTACGCCTCAAACACGCCCTCAGGAAAAATCACTACACTCCGAA CGCCCGTTATCACCAAAAACGAAATCAAGGAAACTCCCCATACCAGTCCC TCCACCTTTGACACTACATGAAGTCACAGAAGGACATCTTTTGACGCCTG TACATGATCGTAGAATGTCTGCTGATCCTAATATGAAAGCACAGCAACAG AACTTTAAATTAGTACCTGTATCTTCAAGCAAGAAAAATCCGGCACAAAT CATTCGCTATCAACAAAAGAGTCAGGATAATCGATTACCAACTAACGATG ATTTAAGAAACAATAAAGCTCTGTCGAGATCAGATTATGATTTCCCAGCG AGCCAGGACGTTTCCCGATTGCAACCCGTTTCTGTTTCGAAAATTCCGAT TCCTTGTTTACTTGATATCGATGGGCGTCCACCACCGACATACGAAGAGA CACAGCGAGCGCGCTTACCGAATATTTTGACCGAATTAACAACAGATGTA GAATCAGGCGCGNGAAGAGACACAGCGAGCGCGCTTACCGAATATTTTGA CCGAATTAACGACGGATGTAGAATCAGGGGCAGTAGTTTTGAAATGGAAT TGCACTGAACTTTCACAAAATTGTCAAGATAACGTACGCGTATATTTATT GTTTGCTTACCATTCAGATAACATTTACGCCCAGCCGCCCTCTGATATAG GGCGTTGGATGCGAATCGGTGAAGTTGATGCTCTTCCACTTCCAATAGCT TGTTCACTTACAAAGACTTTTGATGgcaattgttatttttttaccGTTGT ACCTGTGGATAAAAAGGGTGTTTTAGGGACGATGAGTAATTTATGCGTTT TAGATGTTTCTAGGTAGTATTTGTCAGTTTTTTTATGACAAACTTTTGAT ATGGTTGAGttgaagtcaatttcttttggattAAATAAATTATACATTAT ACACCACTTTCCAAAAACCAATTATC

Coding sequence (CDS) from alignment at sc0000271:30452..36627+

>TCONS_00017578 ID=TCONS_00017578|Name=TCONS_00017578|organism=Clytia hemisphaerica|type=CDS|length=8856bp|location=Sequence derived from alignment at sc0000271:30452..36627+ (Clytia hemisphaerica)
ATGAACAAAACTGATCACCAAAAACATGATAATGAAGAAGAAATGACACC
TAAAGAAGTCCCTAATCAaacagccaatcagattgcaagTTCTCAACAAC
CAACCAATCATATTGAAGCTTCAAACAATGGTCATGACATTGATGTCATG
GTAACAAATGTGATTAAAGATGGTGGACAAGGGAACGGTCACAATATTTT
GAAGAATACATCACCTGAGAAGACAACTATCTCGTCGTCAACGAGTgacg
aaaatattttcagcagaATCGAAGTGGAAACAAGATCAGATCTCATTCAA
CAGaCAGTCAAGCAAATAGTGCAAGAGAGAATGGAGAAACtggaaaataa
tttatttgaaGGTTTCAAGAAAGAGCTGAAGAGAATCAATGAAGAAAATG
TGAATCTGAAGAGGAGGGAACGGACATTAAAAGGGCGAATCCAACTTCTT
GAAAGTAACCTAAAAGTGTCAACTGACAAATCCACCAACACCGAAGAATG
CTCGTTaattcagaaaatgaaaattggaGATGAAAAAGCTCCTACAAATG
AGCAAAAAGAGAGTGAAAACGAGGGCGATGAGATTTCAATTTCTCCTCGA
ACTCGTATCGACCTTGCTGAAGATAAAATTCTACCTCTAACTTGTTCACC
AAATTCTTCTAGCTCTTTGCGTGACGAAAACGATATCACACCTCTGGCGC
CCTCTGACGATAATTCGACCGTTATTGAAGTGGTAGAGACGTCACTGAGC
CGTGAAGAAACAAAAATAGAACTTGAGAACAGTGATGAATTGGTTATAGA
TGAGAAAATAAATATAACGGTTAAGGACAGTTCAACTGAAGAAAGTTGCG
TTGAAAAGACTTTGTCTATAAGCGATAAACCAATGACAATCGAACGTTTT
GATAAAGGAACAACTActaaagaaaataaaggaaCTTTCATAGAGGTTGG
TGATTTGAAGCATAGAGATGAAGAACTGGTCAATCAAAACGGTGCATTTT
TTCGATCAGCTGATCAGAAAGATGATAGATTAACACCTAGAGACCATGAT
ATCGCATTAGCTAAACCAACCAATCAAGGTATTGCTTCAAATGAATCGAC
CAATGAGATTGAGGATATGTTATCACCTCGAATTTCTACATCAACATCAT
CCATCACTGCATCTGTGGAGACTGCGAATAATAATTTTGTGCCGGCAATG
TTTCGATCATTGCCAACAATGGAGGTTAAACCATACCAACTAACAACAGA
ACCTGAAAGGAAAGTCGAccaaattgtcgaaaaatacAAAGAGAGAAACT
TAACAGCCGATAGGAATCCACCAGTTTTAGAGCCATCCAATCACAATCGT
TCTTATGCAGAAGCATCCAATCAAAATCATGCTTTTATTGAACCAGTCAG
TCAATACCAACCTTTGACCAGAGCTGTCAATCAGCAACCACCTTTCTCCA
TTACTTCCATAAACCCGAATGTTTCCATGGACAATACACCGAGATACAGA
ATGAGAGGTCCCTCAAAGCGAGCCGCCAATTCAGAAGTATTCCCTGAATT
TCAACATAAACGTAAACCACGTGTTGGTCGCCCACCTTTGAATCGTGGTC
CACGGCCCCGGCACGTCGTTCGGCCGCACGAGTACCAACCGCCGTGGTAT
AATCGAGTGCCAGCAACTGCAGCTCAGCATCAACGTTTCTTCGAAGAAAT
GCGAATAAGGCACGCTTTTGAACTTCAACAATCACCTCAATTTAAAAGGC
TGTCTTCTAAACAAAAAGCGAAAGCTTACGAAGAAATGGCACTGGCTAGT
ATGAAGTGGGAACAAGAATTTTTAAAGCAACAAGAACATTTACAACGACT
TGAAATGCATCGTTCACCAAATGGTGCAGCTAATGCCAGATTCAACTTCG
ATCCTGGTTACATGCAACAAGGCGCACCAGTGGAATATTTGCACCCATAC
CGCAATGGAAATCCACGATACCCATCGGAGGAAGTTTTGATTTCCCCACG
AAGGAAAAATCCCCATGCTCGATTCCCACCTGAGGAAAGTTCAGTTTCAC
CAGCAAACACAAACACTATTCGCCAAAGTCTTAGGATTCCCGAGGAGGAA
TTATTAGCTCCTCAAggacaaaaacaacaaaatgggaATCCAAGAATTCC
ACCCGAGAGAATTTTAGTTTCCCCAGGGGAGAGGACTCGCTTGATACAAT
CTTCTCCGAAATCTCCTTCTCTCCGTCAGCAATTGTCACCGAGGCAGTCT
GAGCAAAGGAGACAAGACAcaaacaataacaaacttttACAGACCACACC
AGATACACCTATTGTTATACATTCACCAACACCAAAACAAGAGACATACA
CTACGCCTCAAACACGCCCTCAGGAAAAATCACTACACTCCGAACGCCCG
TTATCACCAAAAACGAAATCAAGGAAACTCCCCATACCAGTCCCTCCACC
TTTGACACTACATGAAGTCACAGAAGGACATCTTTTGACGCCTGTACATG
ATCGTAGAATGTCTGCTGATCCTAATATGAAAGCACAGCAACAGAACTTT
AAATTAGTACCTGTATCTTCAAGCAAGAAAAATCCGGCACAAATCATTCG
CTATCAACAAAAGAGTCAGGATAATCGATTACCAACTAACGATGATTTAA
GAAACAATAAAGCTCTGTCGAGATCAGATTATGATTTCCCAGCGAGCCAG
GACGTTTCCCGATTGCAACCCGTTTCTGTTTCGAAAATTCCGATTCCTTG
TTTACTTGATATCGATGGGCGTCCACCACCGACATACGAAGAGACACAGC
GAGCGCGCTTACCGAATATTTTGACCGAATTAACAACAGATGTAGAATCA
GGCGCGNGAAGAGACACAGCGAGCGCGCTTACCGAATATTTTGACCGAAT
TAACGACGGATGTAGAATCAGGGGCAGTAGTTTTGAAATGGAATTGCACT
GAATGAACAAAACTGATCACCAAAAACATGATAATGAAGAAGAAATGACA
CCTAAAGAAGTCCCTAATCAaacagccaatcagattgcaagTTCTCAACA
ACCAACCAATCATATTGAAGCTTCAAACAATGGTCATGACATTGATGTCA
TGGTAACAAATGTGATTAAAGATGGTGGACAAGGGAACGGTCACAATATT
TTGAAGAATACATCACCTGAGAAGACAACTATCTCGTCGTCAACGAGTga
cgaaaatattttcagcagaATCGAAGTGGAAACAAGATCAGATCTCATTC
AACAGaCAGTCAAGCAAATAGTGCAAGAGAGAATGGAGAAACtggaaaat
aatttatttgaaGGTTTCAAGAAAGAGCTGAAGAGAATCAATGAAGAAAA
TGTGAATCTGAAGAGGAGGGAACGGACATTAAAAGGGCGAATCCAACTTC
TTGAAAGTAACCTAAAAGTGTCAACTGACAAATCCACCAACACCGAAGAA
TGCTCGTTaattcagaaaatgaaaattggaGATGAAAAAGCTCCTACAAA
TGAGCAAAAAGAGAGTGAAAACGAGGGCGATGAGATTTCAATTTCTCCTC
GAACTCGTATCGACCTTGCTGAAGATAAAATTCTACCTCTAACTTGTTCA
CCAAATTCTTCTAGCTCTTTGCGTGACGAAAACGATATCACACCTCTGGC
GCCCTCTGACGATAATTCGACCGTTATTGAAGTGGTAGAGACGTCACTGA
GCCGTGAAGAAACAAAAATAGAACTTGAGAACAGTGATGAATTGGTTATA
GATGAGAAAATAAATATAACGGTTAAGGACAGTTCAACTGAAGAAAGTTG
CGTTGAAAAGACTTTGTCTATAAGCGATAAACCAATGACAATCGAACGTT
TTGATAAAGGAACAACTActaaagaaaataaaggaaCTTTCATAGAGGTT
GGTGATTTGAAGCATAGAGATGAAGAACTGGTCAATCAAAACGGTGCATT
TTTTCGATCAGCTGATCAGAAAGATGATAGATTAACACCTAGAGACCATG
ATATCGCATTAGCTAAACCAACCAATCAAGGTATTGCTTCAAATGAATCG
ACCAATGAGATTGAGGATATGTTATCACCTCGAATTTCTACATCAACATC
ATCCATCACTGCATCTGTGGAGACTGCGAATAATAATTTTGTGCCGGCAA
TGTTTCGATCATTGCCAACAATGGAGGTTAAACCATACCAACTAACAACA
GAACCTGAAAGGAAAGTCGAccaaattgtcgaaaaatacAAAGAGAGAAA
CTTAACAGCCGATAGGAATCCACCAGTTTTAGAGCCATCCAATCACAATC
GTTCTTATGCAGAAGCATCCAATCAAAATCATGCTTTTATTGAACCAGTC
AGTCAATACCAACCTTTGACCAGAGCTGTCAATCAGCAACCACCTTTCTC
CATTACTTCCATAAACCCGAATGTTTCCATGGACAATACACCGAGATACA
GAATGAGAGGTCCCTCAAAGCGAGCCGCCAATTCAGAAGTATTCCCTGAA
TTTCAACATAAACGTAAACCACGTGTTGGTCGCCCACCTTTGAATCGTGG
TCCACGGCCCCGGCACGTCGTTCGGCCGCACGAGTACCAACCGCCGTGGT
ATAATCGAGTGCCAGCAACTGCAGCTCAGCATCAACGTTTCTTCGAAGAA
ATGCGAATAAGGCACGCTTTTGAACTTCAACAATCACCTCAATTTAAAAG
GCTGTCTTCTAAACAAAAAGCGAAAGCTTACGAAGAAATGGCACTGGCTA
GTATGAAGTGGGAACAAGAATTTTTAAAGCAACAAGAACATTTACAACGA
CTTGAAATGCATCGTTCACCAAATGGTGCAGCTAATGCCAGATTCAACTT
CGATCCTGGTTACATGCAACAAGGCGCACCAGTGGAATATTTGCACCCAT
ACCGCAATGGAAATCCACGATACCCATCGGAGGAAGTTTTGATTTCCCCA
CGAAGGAAAAATCCCCATGCTCGATTCCCACCTGAGGAAAGTTCAGTTTC
ACCAGCAAACACAAACACTATTCGCCAAAGTCTTAGGATTCCCGAGGAGG
AATTATTAGCTCCTCAAggacaaaaacaacaaaatgggaATCCAAGAATT
CCACCCGAGAGAATTTTAGTTTCCCCAGGGGAGAGGACTCGCTTGATACA
ATCTTCTCCGAAATCTCCTTCTCTCCGTCAGCAATTGTCACCGAGGCAGT
CTGAGCAAAGGAGACAAGACAcaaacaataacaaacttttACAGACCACA
CCAGATACACCTATTGTTATACATTCACCAACACCAAAACAAGAGACATA
CACTACGCCTCAAACACGCCCTCAGGAAAAATCACTACACTCCGAACGCC
CGTTATCACCAAAAACGAAATCAAGGAAACTCCCCATACCAGTCCCTCCA
CCTTTGACACTACATGAAGTCACAGAAGGACATCTTTTGACGCCTGTACA
TGATCGTAGAATGTCTGCTGATCCTAATATGAAAGCACAGCAACAGAACT
TTAAATTAGTACCTGTATCTTCAAGCAAGAAAAATCCGGCACAAATCATT
CGCTATCAACAAAAGAGTCAGGATAATCGATTACCAACTAACGATGATTT
AAGAAACAATAAAGCTCTGTCGAGATCAGATTATGATTTCCCAGCGAGCC
AGGACGTTTCCCGATTGCAACCCGTTTCTGTTTCGAAAATTCCGATTCCT
TGTTTACTTGATATCGATGGGCGTCCACCACCGACATACGAAGAGACACA
GCGAGCGCGCTTACCGAATATTTTGACCGAATTAACAACAGATGTAGAAT
CAGGCGCGNGAAGAGACACAGCGAGCGCGCTTACCGAATATTTTGACCGA
ATTAACGACGGATGTAGAATCAGGGGCAGTAGTTTTGAAATGGAATTGCA
CTGAATGAACAAAACTGATCACCAAAAACATGATAATGAAGAAGAAATGA
CACCTAAAGAAGTCCCTAATCAaacagccaatcagattgcaagTTCTCAA
CAACCAACCAATCATATTGAAGCTTCAAACAATGGTCATGACATTGATGT
CATGGTAACAAATGTGATTAAAGATGGTGGACAAGGGAACGGTCACAATA
TTTTGAAGAATACATCACCTGAGAAGACAACTATCTCGTCGTCAACGAGT
gacgaaaatattttcagcagaATCGAAGTGGAAACAAGATCAGATCTCAT
TCAACAGaCAGTCAAGCAAATAGTGCAAGAGAGAATGGAGAAACtggaaa
ataatttatttgaaGGTTTCAAGAAAGAGCTGAAGAGAATCAATGAAGAA
AATGTGAATCTGAAGAGGAGGGAACGGACATTAAAAGGGCGAATCCAACT
TCTTGAAAGTAACCTAAAAGTGTCAACTGACAAATCCACCAACACCGAAG
AATGCTCGTTaattcagaaaatgaaaattggaGATGAAAAAGCTCCTACA
AATGAGCAAAAAGAGAGTGAAAACGAGGGCGATGAGATTTCAATTTCTCC
TCGAACTCGTATCGACCTTGCTGAAGATAAAATTCTACCTCTAACTTGTT
CACCAAATTCTTCTAGCTCTTTGCGTGACGAAAACGATATCACACCTCTG
GCGCCCTCTGACGATAATTCGACCGTTATTGAAGTGGTAGAGACGTCACT
GAGCCGTGAAGAAACAAAAATAGAACTTGAGAACAGTGATGAATTGGTTA
TAGATGAGAAAATAAATATAACGGTTAAGGACAGTTCAACTGAAGAAAGT
TGCGTTGAAAAGACTTTGTCTATAAGCGATAAACCAATGACAATCGAACG
TTTTGATAAAGGAACAACTActaaagaaaataaaggaaCTTTCATAGAGG
TTGGTGATTTGAAGCATAGAGATGAAGAACTGGTCAATCAAAACGGTGCA
TTTTTTCGATCAGCTGATCAGAAAGATGATAGATTAACACCTAGAGACCA
TGATATCGCATTAGCTAAACCAACCAATCAAGGTATTGCTTCAAATGAAT
CGACCAATGAGATTGAGGATATGTTATCACCTCGAATTTCTACATCAACA
TCATCCATCACTGCATCTGTGGAGACTGCGAATAATAATTTTGTGCCGGC
AATGTTTCGATCATTGCCAACAATGGAGGTTAAACCATACCAACTAACAA
CAGAACCTGAAAGGAAAGTCGAccaaattgtcgaaaaatacAAAGAGAGA
AACTTAACAGCCGATAGGAATCCACCAGTTTTAGAGCCATCCAATCACAA
TCGTTCTTATGCAGAAGCATCCAATCAAAATCATGCTTTTATTGAACCAG
TCAGTCAATACCAACCTTTGACCAGAGCTGTCAATCAGCAACCACCTTTC
TCCATTACTTCCATAAACCCGAATGTTTCCATGGACAATACACCGAGATA
CAGAATGAGAGGTCCCTCAAAGCGAGCCGCCAATTCAGAAGTATTCCCTG
AATTTCAACATAAACGTAAACCACGTGTTGGTCGCCCACCTTTGAATCGT
GGTCCACGGCCCCGGCACGTCGTTCGGCCGCACGAGTACCAACCGCCGTG
GTATAATCGAGTGCCAGCAACTGCAGCTCAGCATCAACGTTTCTTCGAAG
AAATGCGAATAAGGCACGCTTTTGAACTTCAACAATCACCTCAATTTAAA
AGGCTGTCTTCTAAACAAAAAGCGAAAGCTTACGAAGAAATGGCACTGGC
TAGTATGAAGTGGGAACAAGAATTTTTAAAGCAACAAGAACATTTACAAC
GACTTGAAATGCATCGTTCACCAAATGGTGCAGCTAATGCCAGATTCAAC
TTCGATCCTGGTTACATGCAACAAGGCGCACCAGTGGAATATTTGCACCC
ATACCGCAATGGAAATCCACGATACCCATCGGAGGAAGTTTTGATTTCCC
CACGAAGGAAAAATCCCCATGCTCGATTCCCACCTGAGGAAAGTTCAGTT
TCACCAGCAAACACAAACACTATTCGCCAAAGTCTTAGGATTCCCGAGGA
GGAATTATTAGCTCCTCAAggacaaaaacaacaaaatgggaATCCAAGAA
TTCCACCCGAGAGAATTTTAGTTTCCCCAGGGGAGAGGACTCGCTTGATA
CAATCTTCTCCGAAATCTCCTTCTCTCCGTCAGCAATTGTCACCGAGGCA
GTCTGAGCAAAGGAGACAAGACAcaaacaataacaaacttttACAGACCA
CACCAGATACACCTATTGTTATACATTCACCAACACCAAAACAAGAGACA
TACACTACGCCTCAAACACGCCCTCAGGAAAAATCACTACACTCCGAACG
CCCGTTATCACCAAAAACGAAATCAAGGAAACTCCCCATACCAGTCCCTC
CACCTTTGACACTACATGAAGTCACAGAAGGACATCTTTTGACGCCTGTA
CATGATCGTAGAATGTCTGCTGATCCTAATATGAAAGCACAGCAACAGAA
CTTTAAATTAGTACCTGTATCTTCAAGCAAGAAAAATCCGGCACAAATCA
TTCGCTATCAACAAAAGAGTCAGGATAATCGATTACCAACTAACGATGAT
TTAAGAAACAATAAAGCTCTGTCGAGATCAGATTATGATTTCCCAGCGAG
CCAGGACGTTTCCCGATTGCAACCCGTTTCTGTTTCGAAAATTCCGATTC
CTTGTTTACTTGATATCGATGGGCGTCCACCACCGACATACGAAGAGACA
CAGCGAGCGCGCTTACCGAATATTTTGACCGAATTAACAACAGATGTAGA
ATCAGGCGCGNGAAGAGACACAGCGAGCGCGCTTACCGAATATTTTGACC
GAATTAACGACGGATGTAGAATCAGGGGCAGTAGTTTTGAAATGGAATTG
CACTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009833XLOC_009833Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017578-proteinTCONS_00017578-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017578-exon-sc0000271-1491911889:30452..30855TCONS_00017578-exon-sc0000271-1491911889:30452..30855Clytia hemisphaericaexon
TCONS_00017578-exon-sc0000271-1510915933:30452..30855TCONS_00017578-exon-sc0000271-1510915933:30452..30855Clytia hemisphaericaexon
TCONS_00017578-exon-sc0000271-1575043694:30452..30855TCONS_00017578-exon-sc0000271-1575043694:30452..30855Clytia hemisphaericaexon
TCONS_00017578-exon-sc0000271-1491911889:32097..32258TCONS_00017578-exon-sc0000271-1491911889:32097..32258Clytia hemisphaericaexon
TCONS_00017578-exon-sc0000271-1510915933:32097..32258TCONS_00017578-exon-sc0000271-1510915933:32097..32258Clytia hemisphaericaexon
TCONS_00017578-exon-sc0000271-1575043694:32097..32258TCONS_00017578-exon-sc0000271-1575043694:32097..32258Clytia hemisphaericaexon
TCONS_00017578-exon-sc0000271-1491911889:33773..36627TCONS_00017578-exon-sc0000271-1491911889:33773..36627Clytia hemisphaericaexon
TCONS_00017578-exon-sc0000271-1510915933:33773..36627TCONS_00017578-exon-sc0000271-1510915933:33773..36627Clytia hemisphaericaexon
TCONS_00017578-exon-sc0000271-1575043694:33773..36627TCONS_00017578-exon-sc0000271-1575043694:33773..36627Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000271supercontigsc0000271:30452..36627 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.0227108 0 0 1.39101 1.5932 11.1623 11.3678 4.65026 5.99309 6.08436 3.34026 16.1383 17.2926 5.54039 8.99615 8.23574 10.9618 10.9111 12.7167 6.40721 7.31546 2.51691 3.0508 5.27186 5.03871 1.06506 0.387847 0.819073 0.420281
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017578 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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