TCONS_00017565 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017565
Unique NameTCONS_00017565
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length199

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017565 ID=TCONS_00017565|Name=TCONS_00017565|organism=Clytia hemisphaerica|type=transcript|length=199bp
GCCTTGATGGGATTAAAAGGCACAGAAAcacaaaaaatatctaaaaattt
cgttaaaatatatttcctttcaaacataaaaaatctttcttatGTACCAT
GTATATTTACAACGTATCTGTATATCGGTATTTAAATATAGAAATGAAAA
GTGTAAAATATGGAGAACTAAATATCTCTCAATGCCAAACTGTATAGAG
Run BLAST on NCBI

transcript from alignment at sc0000269:148325..148523

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017565 ID=TCONS_00017565|Name=TCONS_00017565|organism=Clytia hemisphaerica|type=transcript|length=199bp|location=Sequence derived from alignment at sc0000269:148325..148523 (Clytia hemisphaerica)
CTCTATACAGTTTGGCATTGAGAGATATTTAGTTCTCCATATTTTACACT
TTTCATTTCTATATTTAAATACCGATATACAGATACGTTGTAAATATACA
TGGTACataagaaagattttttatgtttgaaaggaaatatattttaacga
aatttttagatattttttgtgTTTCTGTGCCTTTTAATCCCATCAAGGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009822XLOC_009822Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017565-exon-sc0000269-1491911889:148325..148523TCONS_00017565-exon-sc0000269-1491911889:148325..148523Clytia hemisphaericaexon
TCONS_00017565-exon-sc0000269-1510915933:148325..148523TCONS_00017565-exon-sc0000269-1510915933:148325..148523Clytia hemisphaericaexon
TCONS_00017565-exon-sc0000269-1575043694:148325..148523TCONS_00017565-exon-sc0000269-1575043694:148325..148523Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000269supercontigsc0000269:148325..148523 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017565 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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