TCONS_00017548 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017548
Unique NameTCONS_00017548
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3223

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017548 ID=TCONS_00017548|Name=TCONS_00017548|organism=Clytia hemisphaerica|type=transcript|length=3223bp
GTTCAGCAAACATGACCATTACAACATTTATTGAATCTTTGGTCATATAC
ACGAGTACCACAACAAGCTGGTGAAATTCCTGCTCTTGTGCCGATCACTC
CACCGCAACACATATCAAATCTCCTGTCATAATTCCTTGTCCCGCAACAC
GCAGGAGATACTCCCGACCTTGTTACGATCGTGCCTCTGCAACACATATC
GAATCTGCGATCGTACCCCCGTGTCCCACAACAAGCAGGTGAGACACCCG
ATCTCGTCACGACCATACCGTTACAACACATATCGAATCGATCGAACCAG
TTCTTTGATCTCCACAACTGACCAACTGATTCCAAACACGATACAAAACG
AAAGTGGAAGTGACCGGCGTTTCTCATCCACCCAACCACAACTACCCTTT
GAAGAAACAGATCACGTGGGTGCAAGACAGCCGTTGGCGTCGCTTCAATT
GCAGCTACCTCCAAATGCGAGTGAAATTGTTAACAAACTTGTCACCGCTA
CGTATACTACAAGgaaTGATTTTCGAGATGCTGGTGTTCTCTATAATCCG
AAATCGTTCCTCGAAAAGTTGAAATCGTGGGCTAAGTGTTTGTCAGAGGC
TACAAAGAGCTTCCGCGAGGAATGTTTTCGATTATTGGACTCAAATATTC
AAAGAGAAATGAACAACACCATCTTAGCTTACCTAGATGTGCAGTGCAAT
GATCTCTTCTTCCAACAGTCACACTCAGCGTTCAGTGAAATTTGTAATCT
GGCCATGTTGTGTTTCGAAACGAACACTTTCCCTAAGAAATGCTCCATGT
TAAAAGCTCACGAAATAAGTTTGTTGAACACGGAATTATCTCTTGACGTT
ATCATGGAGAACGCTGAGGAAGAAATGCAAAGAATTTTGACGGCGGAGAG
CAAAAATTCACCAGTGGTGGAGAAAGTTGAGAAAGACCCTCCATCGTTGG
AGAAAGATACTGAAAAGGTGACGGTACCGGATTTGTTGCAAGATATAAAG
AATATCAAAGACGTTGGCGAGCTACTAGACCGGAAAAGTCTGAGCACCAT
AGCCTCTGTTGATTCTGGTAGTAAATCGTCCAACTCAACGTGCGATATTT
TACGCGAATCAATCGATATTTTAATCGAAAATACCGCCATGTGTGAAAAT
TACGACTTAACCGAAGGTGAATCGTGTGAATGGTGTTTAATCGATAAATG
TCGTGCGTGCTTCGTGTTGAGGTATTTTCCCATCATCAATTTTGCACGCA
TTCGTGTCATTTTGTCATCCACTAAGAAGTGCCGATGGAGAACTTGGCTT
GCTTATGTGATCACTCTCAAATATACTCATCGGAATTCAACATTGGCAAA
ACTGATCGAAAGTAATTCACCGGATTCTAACATCCTTGAAGAAGTTGTCA
ATACTGATCTCAAACATTTTCTTGCCGTCATCTCAAAACTCTACAACCGT
TCGTTGAACTTACTGCTGGACTGCATCACGTGCAAAGACTTGGGCCAATG
GGAGATCATTATTTTGATGTATTCTGGTATCCTTGGCAACGACGAATCAA
AACACGAGGAATATCTCGCTTATTTCCaacaaaaattagaaatcaaagaC
TTGAAACTAGAACACATTTTCACGCGTCTTGTGGTCGAATCCGCCCTTCA
GTACCACCCTGGGAACGCCCTCTTGTTTTGTGGTAGTTCTGGTAAAGCAC
GTCCTGGTTCAAGCACCTTGGAATGGCGTTGGGGTGGTCTTTTgaaagat
cttgtagagaatcTCCATAAATCACCCACCAAATGTGAAGAGCATGTGGA
TATCATAGCGAAGTTGTGTTTTAAACACGGgtattGGCATGGCTACGTAA
CCTTAGCAACCATCAACCAATCACTTTATCAATTAATCTGTCAACTAGCT
GACACTCGTTTACTTGATTACTTCATCAACACTCGAAATATTGACCTTGG
TGAGGACGGCTGTTCCGCCATGCTAAACCATTTCGCCGCTCGATTCGATC
AATCTTCCGACGTTTTTGAAGGATCAACTGAGAGTCATGCTTGTAGCCCA
CTCGATGGGTGGTCTCCAACACTTACCTTGGAACGGGTCATTCAATTAAC
CGCTGCATATTGTGGTTCGAGATACACTTTGAATTGTTTGAAGGAGAGCA
CTCCTTCAACGTGGTCAGACTCACTAAGAGAAATTTTCGTCTCACTTTTG
AAAGCTGTGGAGCTTGAAAGCAAAGAAgagTTAATCATTTCCTCGTTGAT
CGAAGAAGCGAGTGCGCAAGTCTGGAATGAACCAAGGAATTATCTTCCTC
ACGAGTTTCAACTTGTAAAGAAGTTAGAATTTGATGATGGTgaaatttca
gccaatcagattgaTAGTTTGTATCCTAACGAATATGTGCAGGACGACAC
AGaaGCCGTTTGGGGTCGCAGTATAGATATCTCAAACGGTGAATGTCCAG
TATGCACATTACCATTGCATTTGAAAACCACTTACACATCCGCATCTGCT
GGTCTCATTGTTTTCCAGTGTGGCCACAGCTTTCACAAGATTTGTGTTCC
CGAAGATGCTTGTCTGGTTTgttatcatgaaaatttctctACCATTATCT
AAGATTGCATCATTCGAATCAttcagttttaattttcaaaaatcataaca
aTTTTTATTCTTCATTAGAAAGGGATTGCTGATTTCTTGTGATTCTTAAG
CAATACAATGGTCGATCATCGTACTTCTGATATTATCAAACATATCAAAT
AACATTTAATGCgttatttttaagaattattaCGTCCAGGTTTTTTCCAT
TGGTACGCGGGTACCTTCTGTTGTTCTCCAAAGTATTATCAATCCACTGT
TTTCTCGAAGCTGGTTTAGATTatgtgattttgaatttttgaatttttgc
cgtatttttttgtttgttttagattTAGTTTACACATCAGCATTTGGGAA
TAATGTTTTAATGTTCGATAACAATAATAGTCATATAATATATTCAATCA
CCAGTTTAGATAGATGTCTAAAAGCAATGAACATATATTTTTATACAGTA
GATTTCttatttggaatattttttgatagtAGATTTTTTATACCCAACAT
AAATTCGTATAAAAGCCAGAAATGTCGATCATAGTTGATTCGATACCAAA
gtttatttcgtttttttcttttactgtaATTCaagtattcttatcaaatt
ttgTTCTGTTCATAgaatgatac
Run BLAST on NCBI

transcript from alignment at sc0000269:324530..338556-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017548 ID=TCONS_00017548|Name=TCONS_00017548|organism=Clytia hemisphaerica|type=transcript|length=14027bp|location=Sequence derived from alignment at sc0000269:324530..338556- (Clytia hemisphaerica)
GTTCAGCAAACATGACCATTACAACATTTATTGAATCTTTGGTCATATAC
ACGAGTACCACAACAAGCTGGTGAAATTCCTGCTCTTGTGCCGATCACTC
CACCGCAACACATATCAAATCTCCTGTCATAATTCCTTGTCCCGCAACAC
GCAGGAGATACTCCCGACCTTGTTACGATCGTGCCTCTGCAACACATATC
GAATCTGCGATCGTACCCCCGTGTCCCACAACAAGCAGGTGAGACACCCG
ATCTCGTCACGACCATACCGTTACAACACATATCGAATCGTGAGTTGTAT
TGTCGGTTGCCACAGATACCTCGACGTTGGCGCTGATGAACATCTGAAAG
AAAAAGTTTTTGTTTTAAGAAAATGCCTTACAAAATGAAAAACCTCCCCT
AAATGATCGGATACATATACTTTTGATAGTCCAGAAATGTGCTACAATGA
ATATTTAGGAATCTTTTTGAGATCTTATGCGAAGGTTTTTTTATTTAACC
TCTTTATTAAACAGTCTTGTGTTTCTCAAGACTCTCGTCAGTACGACTTG
GGTAAGCGAGAATAGACTAACCAAACTAGCTTGGGTAAGCGAGAATAGAC
TAACTAAACTAGCTAGCATGAGCTTACTCCTAAATACAGTTTTTAGAGTG
CTCAAAGAACTTACAATTCTGAGCGCGTAATTTCACAAGAAAATATTTTC
AACTCGTTTAACGAGCCTTGTTACCTTGATCTGAGTACACTTGGCCGATG
ATAACCACAGCAAAAATGAAAAAAATCTTCATGATGTCTTCTGATGTTTT
AAAGTGAAATTTGAACCGTCACTGCTCATGTAACTTTTTGTAATGATGTG
AAAATGTTTTGAAATCTGTCAAATTATTTAATGTGTATATTGTAACAGTT
AGCATAATATTTGACAGTATTACTGTATGAAATTTCAACACTGAATTGAA
TAAACAATAAAATTAAACACACGTCCCTAAATACCTAATACCGACAGCTT
TTTCTTAAATTACAAAAAATCCCTAATAAAATACCATATTCCAAAGAATC
ATAAAAAATCAGCGAGCATCAAAGCTATTGTCAGGTTTCAAACAATCTAC
CACACGTAAACAAAGAAACCATACCATCCGTCCTGCAAAGTGCACAGCGG
AAAAAGTATAAAATTTTCCTAGTTTCAGTAATAATTTTCCTTTCCAAGAA
GTCTTTTCTGCCGATCCGCCAAAACTTTAAACCATTGTGAGTTTTAAAAT
GGGTTCCAGACAAAGACATTGCCACCGTAAGAAAGCTCATAGCCTTGACT
CTCTAAAATAACGAGGTCATTTCGGCTGACAACGAAACAAGCAATTGCAA
GGCCTTAAAATCCATGATAGAGCTCTTTGAACTGAGTAAAAAAACTATAA
CGACAAAGAGCTCTATCAAATGGATACAGTGGTAACACTTAAATTCCAAA
TCAACCCTCAAATTGACCAATATCAATTTCAAAAGCTTTTGCATATTTGG
ATAAAGAAAATCAAACGAACTATCATGAAAAGTGTGAGAATCCGCAACTG
CAAGGTCGATGATGAAGAATTATATAGTTATTATTCAATTAGATGAAATT
AACGTAAAGATATATTAATCGACTACTCTTTTTCAGGATCGAACCAGTTC
TTTGATCTCCACAACTGACCAACTGATTCCAAACACGATACAAAACGAAA
GTGGAAGTGACCGGCGTTTCTCATCCACCCAACCACAACTACCCTTTGAA
GAAACAGATCACGTGGGTGCAAGACAGCCGTTGGCGTCGCTTCAATTGCA
GCTACCTCCAAATGCGAGTGAAATTGTTAACAAACTTGTCACCGCTACGT
ATACTACAAGGTAGAAAACTTATTTTTAGCCATTACTTCTAAAATCCAAA
AATGCATGTATCCTTCGATCTAGGTCTGAAGGAACCTAGCTGGGAAACAA
GCAATAACTCTCCCTACAGTTCGTGATCTCTAGCTCCTCAATCTGCAGCC
GAAAACAGGGCAAGCAGGGCACATTGTAAGATATCCGATCCAATTTTTCT
TTTCGTGTGGAAGAGTGACCTGAGAAAGAAAGAATCCTGCTGGCCAAAAC
AAAAGAAATTCTTGGAAGTCCATGATCGATATATTGTAAAGGGTTGGGTG
GTATAGCAAAGTAGATTAATTAATTAATTTTCATTTTTCCAGGAATGATT
TTCGAGATGCTGGTGTTCTCTATAATCCGAAATCGTTCCTCGAAAAGTTG
AAATCGTGGGCTAAGTGTTTGTCAGAGGCTACAAAGAGCTTCCGCGAGGA
ATGTTTTCGATTATTGGACTCAAATATTCAAAGAGAAATGAACAACACCA
TCTTAGCTTACCTAGATGTGCAGTGCAATGATCTCTTCTTCCAACAGTCA
CACTCAGCGTTCAGTGAAATTTGTAATCTGGCCATGTTGTGTTTCGAAAC
GAACACTTTCCCTAAGAAATGCTCCATGTTAAAAGCTCACGAAATAAGTT
TGTTGAACACGGAATTATCTCTTGACGTTATCATGGAGAACGCTGAGGAA
GAAATGCAAAGAATTTTGACGGCGGAGAGCAAAAATTCACCAGTGGTGGA
GAAAGTTGAGAAAGACCCTCCATCGTTGGAGAAAGATACTGAAAAGGTGA
CGGTACCGGATTTGTTGCAAGATATAAAGAATATCAAAGACGTTGGCGAG
CTACTAGACCGGAAAAGTCTGAGCACCATAGCCTCTGTTGATTCTGGTAG
TAAATCGTCCAACTCAACGTGCGATATTTTACGCGAATCAATCGATATTT
TAATCGAAAATACCGCCATGTGTGAAAATTACGACTTAACCGAAGGTGAA
TCGTGTGAATGGTGTTTAATCGATAAATGTCGTGCGTGCTTCGTGTTGAG
GTATTTTCCCATCATCAATTTTGCACGCATTCGTGTCATTTTGTCATCCA
CTAAGAAGTGCCGATGGAGAACTTGGCTTGCTTATGTGATCACTCTCAAA
TGTGAGTATAAGAAACAATCTTGAGGGTTTCTGGGGGTTATAGTTTGAGA
GCTGTTTTCCTTTTTATTAGGGTCCAAGCCTCAGAATTCTAACCATCCTC
AACCGGATTTGTTTCGGTTAGATTTTCGATATCGATGGTCCCTATGGGTT
GTACTAATTGCCTGTAAATCTCTTCGGGGCTTGTCAGTATAGAAGAAACC
GCTAGCACCGGATCGAACAAAGCATTTTGACGGTCTTTGATACGGTGAAC
ACGTGTAGGATGACTTCACGATGACTTATGACCTAATAAAATAGACCAAC
AGCTCTAACAAGCTAACTCTTGATAACTCTCAGCTGTAACTGATACGCTA
AGCTGCTTAATTCTATGCCAATTAAAATAGATAGATATTTTCAGCCATCA
ATGCATACGCTAAGCTGCTTATTTCTGTCAATTAATATTTTCAGCTATAA
GGCGAGATCAATTTAATTTGTTGTTTCACGGGCCAAGCTGCCCAAAAAGA
GGGTCGGTCGGCGAAAAAATGAAAATAAAAGTAGAATTTCTCCTACAAAA
TCTCCTAAAAAGGCAGCAAAAATTACTACATCTTGACAAAAATGCGAAAT
AGAAAATAAACAGACACAGAGAGCTCAAATTCATGGATAAAATGAAAAAT
TGAACATGAAATTCTCATAACCTTGGAAAAACTACCAAAATTTTGAAAAT
TTGGCAGCCTGTAAAGCAATGAAAATAAAAATGTACTATTAAAATCAATT
GTATTTTTATTTCGATTTTTGGGATTTCAGGGTTGGTCGGGCCTGTAAAA
CAACTAATCAAATTGGTCTTGTCTAAATATAAAATGGTTATAACTGTAGA
TTTCTCATGAACGTTTTCATTTTTCGTTTTGTTGTTGAACGTTTCAGATA
CTCATCGGAATTCAACATTGGCAAAACTGATCGAAAGTAATTCACCGGAT
TCTAACATCCTTGAAGAAGTTGTCAATACTGATCTCAAACATTTTCTTGC
CGTCATCTCAAAGTATGTATGTTTGTTCAACTTGTTTTTTATCTATACCA
GAAGAACAGTGGGCTTTTCCAGAAAAACCCCCTGTTGAGGAGGTCCACTT
CCTCCAAGGGGTAAGGTTTGATATGTGGCGGAATTCCGTAGGAGATACAA
AAACTTTGTCAAAAATAACTGGAATTCCATGGGGGTTGCTTTTTAAACCG
TACTAAAATTTAGAATTCCAGAGGGGTTTAAACCTAAAATTGCCTGGAAT
TCCAGGGGGTTACAGCATTTCCAGCTATAGAGGGATGGACCTCCTCAACA
GGGGGTATACGGTTTTTTCTGGAAAAGCTCAATTTGTAGTAAACATAGTT
TCTTTTCAAATCTTTTTACTGATACTGAGTCCTGTGTTAGTTTCTCAGTA
TTAATCCTAGTTTTTAAATAAAGCCAGATGCCTATTCCACGCCTAAAGTG
TTGAAAATAGTCAAATGTCCACTGAACTAGTTAACTTCCAACCTTCACAT
TCTTTAGACTCTACAACCGTTCGTTGAACTTACTGCTGGACTGCATCACG
TGCAAAGACTTGGGCCAATGGGAGATCATTATTTTGATGTATTCTGGTAT
CCTTGGCAACGACGAATCAAAACACGAGGAATATCTCGCTTATTTCCAAC
AAAAATTAGAAATCAAAGACTTGAAACTAGAACACATTTTCACGCGTCTT
GTGGTCGAATCCGCCCTTCAGTACCACCCTGGGAACGCCCTCTTGTTTTG
TGGTAGTTCTGGTAAAGCACGTCCTGGTTCAAGCACCTTGGAATGGCGTT
GGGGTGGTCTTTTGAAAGATCTTGTAGAGAATCTCCATAAATCACCCACC
AAATGTGAAGAGCATGTGGATATCATAGCGAAGTTGTGTTTTAAACACGG
GTTAGTCATTAACTTCCCTCTTTTATAAATCAATTGTTTTTCTTGTTTTG
TGAATGAAACCATTATTTAGGAGACTGTCTACTCCATATCAATTTTACCA
GGCCAATACATCGACCCCCCAAATTTACTACCCAGCTCTTGCCACGCCTG
CAAGCAAGTTTGGAATACACAAACCAAATAATACAGAATGCAAATGGCAA
TGACAGTTTTTACAAAATGACACTACCGTCTACAACCTAGAAAATATGGT
TAAAAAGTTCTTCTTGGCTGTCATTTTGTTTTGTTGAGCTTTCTGCTTCA
GTGCAGAAATTGTTTCGTTATTAATTTTTCAGGTATTGGCATGGCTACGT
AACCTTAGCAACCATCAACCAATCACTTTATCAATTAATCTGTCAACTAG
CTGACACTCGTTTACTTGATTACTTCATCAACACTCGTGAGTATCAGATA
CTTTGCACATCTCACAAAATAATTAAATAATACTGACATAAGAACTAGTG
AATGTCAGAAGCATCTAGGTCTTATCTTGGATTCCAAACTCTCATTCAGT
CACCATTTAGACGAAAAAATAAAAAAGGNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC
TCATTAACAGACTTCGCAAACATGTACCAAGAAAATCTCTGCTTACTTTA
TACAAATCTTACATTAGACCACATTTAGACTATATATATAATATATATAA
ATTTTACAATCAAAATCTATTTCTAGAAAAAAGATTGGACCTAGAACCAA
GCTCAGTGAATTGGTTTTAAGTCGATCTACCAAGTTTCTTGCCTAGGGAA
ATATTACACAATTGGTCTATTGAAACATTTTCATTATCAGTCACCTGATT
GAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAATAGATTTGACATTTCAG
CAAATTTCGATTGAGATATTTGTATGCGCTGGTTAATTTCGGAGTCGCCT
GTGTTGGGTTCATCATACTTGATAACCGGGCCAAGATATCTGAATTCAAC
GACATTCTTCAGAATCATTCCTCTTAGAGTTACGATTGACTGAGGATATT
CTGTGTTGCAATTAATTATCATAGTTTCAGTTTTTGAGACATTTATTGTC
AAACCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGAATTAACAAACAGGAC
GAGGTCATCAGCATAGCCACACCATTCGAGAATTGATTTTCCAGCGAGCT
TTTTCCCTTGTTCTCTAAGAGCCGCTCTTTCATCTCTGGTGAACGATTTC
ATATTGATACCGTATGTTCAAAAAAATCAATTCTTTCCTTTTTCCCCTTT
TCGATGAAGAGACGCATGACGAAGTCTATGTAAAGATTGAAAAGGAGAGG
ACTCTCTGGGCCACCTTGTCTAACCCCTGACGAAGTCGTAAACGTATTTT
CCTCACACGTCAATGAAGTTTTCTCATAAAGAATGTTGAGAATATTTATC
ATTTTTGGTAGTTGATTAGGTCTGAAACGCAATTGTATCGATTTGAATAG
CCATCTACGAGGGATATGGTCGAAGGCCGCCGATAGGTCTACGAACATTA
GAAAGATTGGTTGCATTTTGCGATGAGATATTTGTTGTNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNACAGTTTCTCTATTTCACGATTGATCGCTAAGACATTTATCTT
TTCAGCTTCTTGTTTAAAATGCTCATTTTTCAAATATTTGACACGTGATC
TGATCTTTTTGCGAATGGAAGCCAGACTTTTATGATCGCTGTTATTTGAC
ATTAATTCGTCTTTCGTTTGAAATAATTGTTTAAGTTTTTCATCATTATG
CCAGGGTTGAGTTTGTCTGACACGATTCTTTTTCGGTAATGTAGTGTCTG
CGCTACTTTTGATTACGGTAACAAGTTTTTCAGTAAGTTCAGTATTGGTC
GATTCATCCAAATTGTAATTTGAAAAGTTCTCGGTTACAGTATTAAGAAA
GTTAGATTCTGCTACACCGTCAATAGCTGAGAAGTCTATTCTCTGTTTGA
TAACTGTCTTTTTTCTACCAATAAAGCGTGCGATTTTTGTGACTGGAGTA
TTGAGACTTGCTATAACGAGCCTGTGATCTGTGTCAAAATCATAAGAATT
GTAAACACGACAGTTTGTTGTGAACTTTCTAATCCAACAACATGATAGAA
CGAAATCATATACCTTTTCTGTTTTACCATCGGGAGAGTGCCATGTAATT
CTCCTACATAACTTATGGTTGAACCAGGTATTCAATACAGACATTTTTTG
AGTGTTTACAAGATCATGAAATCTACTCCCATTATCATTTACAACAAGAC
TTTCGATTATCTTCCCTTCTCTCAATGACGAATTATAAAGACAAGCTGAT
GAAGTAGCATTGAAGTCTCCTATGCAGATCACTTTACGTTTTTTATCGGT
AGGCTGAAATTGTTTTTTCAACTGGCAATAGAAAGCATTTTTGGCTGAGA
CTGTACTTTCTTCAGTCGGAGCATAACAGTTTATAATACGAAGACAACAA
CCGTATACATTTATATCTGCTATAATTAAGCGAGGGTTCGCTGGAGTAAT
ATCAAGTACATCGATATTAGGGTCTGATTTGATAACAATTCCAACGCCAT
GGTGTCGTTTAGTTTGGTAACCGCTCCAGTAAATATGGGGATGGGGATAT
TATATACGACCATCCTGGAAATTCGACTTTTGTTCGTAAGCTTGAATCCA
TCCAATATAATGCCTGCCTTGCTATAACAGGCTGTTTTCGTGGAACGTCT
CAAGAAAAACTTTATTCTGAACTTGGTCTCGAGAGTCTTGCTGATCGTCG
ATTTAGTAGGAGAATGATCTTCTTCTACAAAATTTTAAACAATTTATCCC
CCTCTTATTTACGTAACTACTTACCAGCAAGACTTGCGGCACCGGGTAAT
CAAGAACAAGAAATCCTATTTATCAACTTAATATTCGAATTGAGCGTTTC
CGGAATTCTTTTTATCCATACTGCATAACACAGTGGAATATTCTGGCTGG
TCGTATAGGAGATATGCCTTCAGTATCTACCTTCAAAAAAGCAATCCTCG
AGTTTCTAAGGCCCAAACCTTCTCCTGATTTTGGAGCTCGTGACAACCAG
GGTGTGATCCTTCTCAATCGTCTTCGAGTAGGATTTAGTCACCTCAATGA
ACATAAATTTAGACACGGTTTTCGTGACACCTTAGATCCATTATGGTTTT
CCCTTTAAGTTTTTTATTTTATTCAATAGCTTAGTACCCCTGGCGATATC
ACTTAGTGCCTTGCGGGGGGATGAGCTATTTATTTGTTCTGTGTTTGTTT
TTGTAAGTAGTATATGTTCATAAGTGTAATGTAGCTTCTCAAATCATATA
TTAAAAAAAAAAAAAAAAAAAAATCTTCACCTTATCGGCCGGACCTCAAC
TGTCCATTTTGTACTTACGCCAATTATGGCCGTAAATAACACGAAAATCG
ATCAAAATATCTAAAAACAGTCAACATGGCCTGAATTTTACGTCAAATTT
CCCAAAATTTTCTATTTCTTTTTTTCTTGTATTTGAAAGGAAATATTGAC
CTTGGTGAGGACGGCTGTTCCGCCATGCTAAACCATTTCGCCGCTCGATT
CGATCAATCTTCCGACGTTTTTGAAGGATCAACTGAGAGTCATGCTTGTA
GCCCACTCGATGGGTGGTCTCCAACACTTACCTTGGAACGGGTCATTCAA
TTAACCGCTGCATATTGTGGTTCGAGATACACTTTGAATTGTTTGAAGGA
GAGCACTCCTTCAACGTGGTCAGACTCACTAAGAGAAATTTTCGTCTCAC
TTTTGAAAGCTGTGGAGCTTGAAAGCAAAGAAGAGTAAAACAATTTTTTT
TATTGTCTCGTACCAACTATTATGAATTTTTTGGATTGTATTTTTATTAT
CCTCACGAACCAATCACGTTTGTTTATTTTGACAGCTACATCATTTTTTC
AATGAGAGCCAGGCTTAAAAAAAACAAAAAATACGAAGTCTGAGACTGGA
ATGTTTGAATTTTGAACAAATTAAGGGTCAAAAGGTACTTAATTGAAGTG
AAATGTAAGTATAATGGAGAATGTTTTCAATAATAATGTAATGTTTTCTT
TTTCTTCTTCATTAGGTTAATCATTTCCTCGTTGATCGAAGAAGCGAGTG
CGCAAGTCTGGAATGAACCAAGGAATTATCTTCCTCACGAGGTATGAACG
GTGTTTTACTTATGGCTTATGGGCACTGACCTTTATATACCCTGGACCAA
GTTTCTCAATCCCGGCAAAGCAAAATCTTTGATTGGAGTTTTTTTAAAGT
GGTACCCTAATGGCGGCACTACTACGGTGTGAATGCATCGAAAGTGCTAT
GTCTACTATGTGTACTATGTCCCTTAAATACTTTTGAGGATGTAGCGGCG
TTAGACGTTAACTTTTAACATTGCTTCTTCTCGGGCTCCAATTCCAAAAA
AACTCCAATCAAAGATGGCGGATATAGCTTGGTCCAGGAATATATAAAGG
TCAGTGCTTATGAGTAGTTCCAACAGATTTGGTAGGGTCCAATATCGTTG
CTAACAAACGAGTACTGTAACTCCAATGCTAGTCCTATTCTAATTTTTCT
CAAAAACTTGTTTAAGTTTTCCTTTTACCTTGTGTAAAATGTTGTTAAAA
TGTTTTTTGTTGATTTCAGTTTCAACTTGTAAAGAAGTTAGAATTTGATG
ATGGTGAAATTTCAGCCAATCAGATTGATAGTTTGTATCCTAACGAATAT
GTGCAGGACGACACAGGTACTCCACACTTTACCCTCCTCATACTACTAAC
GCAATAAACACAAATTATGGTGACAATCTTCCTAATGCCAATCCACTTTC
ACCGACTTCCCGGTAATATATTGCTGTTTTTATTTTTCATAGAAGCCGTT
TGGGGTCGCAGTATAGATATCTCAAAGTAAGATGCTTTTGTATTTCGATT
CTAGAACACGTACGAAACTTTGTCATTCGCTTTTAAAGTTTTTGGAAATC
AATTCATACATCTCACCCATTCCACTTTTTTTTATAATCTCATCGCACGG
AACTACGCTTTTATGGACTTCCTCTGACCCTTTTCTGAGATTACTTTTCG
GTCCATTGTCAATTGCACCGATTACACTGAACCAAGAGATAGAATTTTGA
AGATGAGTTTCTGAACGGGCCCTGAATTAAAGCTTTCTTGAACAATTCAT
TTTCTCCATCATTAGCGGTGAATGTCCAGTATGCACATTACCATTGCATT
TGAAAACCACTTACACATCCGCATCTGCTGGTCTCATTGTTTTCCAGTGT
GGTAAGAATCTCTTGATCAAGTATTAATGTAATGAAATAACTGAATTTAT
CTGCTGTTCACTTGAGTTTCGAACATTTGACAGTTCAATATTAAAACAAA
TTATGACCTTATCATTGGGAATAAAAAAGTGATTTCACCTCTCAGTCGAT
CTCATGGTATTGTACTTTCTTTGGTCTGTTATTCTTTATGCTACAAGGGA
GTCTCAATCGGACAGAAGTTGAAATTTAAAACATCCCGAGCTATCCTTAT
ATACATAAGTTATACATGCAAGTTGATGACCCAAAGAATGTCTGCTAAAA
GCTAAACGATAACTCGAATAACATATCTCGCTAGTCCCCTTAACTACTTG
AGTAGAAAATGTCCAGTATTTAGCTCAATGAAAGCTAAATGTTGCTAATT
CTTGCGTAAGTCAAGATGACGTCATACCGGGTGTAAGTATACCCTCGTTT
TTCGCCATTTTTCAAAAGTAATGTTTTAGCATTTAGACAATAACTCTAGG
TGACCAAATTTGACAAATTACCCCTTAGATAATTGAGTTAAAAAAACATC
CGGTATTTAGCTCAGCCAAACTAGAATTCGTTTTTTGGATTTGATTATTT
CATTATTATCTTTTGTATTCTTTTAGGCCACAGCTTTCACAAGATTTGTG
TTCCCGAAGATGCTTGTCTGGTTTGTTATCATGAAAATTTCTCTACCATT
ATCTAAGATTGCATCATTCGAATCATTCAGTTTTAATTTTCAAAAATCAT
AACAATTTTTATTCTTCATTAGAAAGGGATTGCTGATTTCTTGTGATTCT
TAAGCAATACAATGGTCGATCATCGTACTTCTGATATTATCAAACATATC
AAATAACATTTAATGCGTTATTTTTAAGAATTATTACGTCCAGGTTTTTT
CCATTGGTACGCGGGTACCTTCTGTTGTTCTCCAAAGTATTATCAATCCA
CTGTTTTCTCGAAGCTGGTTTAGATTATGTGATTTTGAATTTTTGAATTT
TTGCCGTATTTTTTTGTTTGTTTTAGATTTAGTTTACACATCAGCATTTG
GGAATAATGTTTTAATGTTCGATAACAATAATAGTCATATAATATATTCA
ATCACCAGTTTAGATAGATGTCTAAAAGCAATGAACATATATTTTTATAC
AGTAGATTTCTTATTTGGAATATTTTTTGATAGTAGATTTTTTATACCCA
ACATAAATTCGTATAAAAGCCAGAAATGTCGATCATAGTTGATTCGATAC
CAAAGTTTATTTCGTTTTTTTCTTTTACTGTAATTCAAGTATTCTTATCA
AATTTTGTTCTGTTCATAGAATGATAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009807XLOC_009807Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017548-exon-sc0000269-1575043694:338268..338556TCONS_00017548-exon-sc0000269-1575043694:338268..338556Clytia hemisphaericaexon
TCONS_00017548-exon-sc0000269-1575043694:336697..336920TCONS_00017548-exon-sc0000269-1575043694:336697..336920Clytia hemisphaericaexon
TCONS_00017548-exon-sc0000269-1575043694:335556..336364TCONS_00017548-exon-sc0000269-1575043694:335556..336364Clytia hemisphaericaexon
TCONS_00017548-exon-sc0000269-1575043694:334545..334659TCONS_00017548-exon-sc0000269-1575043694:334545..334659Clytia hemisphaericaexon
TCONS_00017548-exon-sc0000269-1575043694:333657..334049TCONS_00017548-exon-sc0000269-1575043694:333657..334049Clytia hemisphaericaexon
TCONS_00017548-exon-sc0000269-1575043694:333221..333324TCONS_00017548-exon-sc0000269-1575043694:333221..333324Clytia hemisphaericaexon
TCONS_00017548-exon-sc0000269-1575043694:327323..327617TCONS_00017548-exon-sc0000269-1575043694:327323..327617Clytia hemisphaericaexon
TCONS_00017548-exon-sc0000269-1575043694:326966..327041TCONS_00017548-exon-sc0000269-1575043694:326966..327041Clytia hemisphaericaexon
TCONS_00017548-exon-sc0000269-1575043694:326391..326487TCONS_00017548-exon-sc0000269-1575043694:326391..326487Clytia hemisphaericaexon
TCONS_00017548-exon-sc0000269-1575043694:326231..326264TCONS_00017548-exon-sc0000269-1575043694:326231..326264Clytia hemisphaericaexon
TCONS_00017548-exon-sc0000269-1575043694:325856..325941TCONS_00017548-exon-sc0000269-1575043694:325856..325941Clytia hemisphaericaexon
TCONS_00017548-exon-sc0000269-1575043694:324530..325230TCONS_00017548-exon-sc0000269-1575043694:324530..325230Clytia hemisphaericaexon
TCONS_00017548-exon-sc0000269-1510915933:338268..338556TCONS_00017548-exon-sc0000269-1510915933:338268..338556Clytia hemisphaericaexon
TCONS_00017548-exon-sc0000269-1510915933:336697..336920TCONS_00017548-exon-sc0000269-1510915933:336697..336920Clytia hemisphaericaexon
TCONS_00017548-exon-sc0000269-1510915933:335556..336364TCONS_00017548-exon-sc0000269-1510915933:335556..336364Clytia hemisphaericaexon
TCONS_00017548-exon-sc0000269-1510915933:334545..334659TCONS_00017548-exon-sc0000269-1510915933:334545..334659Clytia hemisphaericaexon
TCONS_00017548-exon-sc0000269-1510915933:333657..334049TCONS_00017548-exon-sc0000269-1510915933:333657..334049Clytia hemisphaericaexon
TCONS_00017548-exon-sc0000269-1510915933:333221..333324TCONS_00017548-exon-sc0000269-1510915933:333221..333324Clytia hemisphaericaexon
TCONS_00017548-exon-sc0000269-1510915933:327323..327617TCONS_00017548-exon-sc0000269-1510915933:327323..327617Clytia hemisphaericaexon
TCONS_00017548-exon-sc0000269-1510915933:326966..327041TCONS_00017548-exon-sc0000269-1510915933:326966..327041Clytia hemisphaericaexon
TCONS_00017548-exon-sc0000269-1510915933:326391..326487TCONS_00017548-exon-sc0000269-1510915933:326391..326487Clytia hemisphaericaexon
TCONS_00017548-exon-sc0000269-1510915933:326231..326264TCONS_00017548-exon-sc0000269-1510915933:326231..326264Clytia hemisphaericaexon
TCONS_00017548-exon-sc0000269-1510915933:325856..325941TCONS_00017548-exon-sc0000269-1510915933:325856..325941Clytia hemisphaericaexon
TCONS_00017548-exon-sc0000269-1510915933:324530..325230TCONS_00017548-exon-sc0000269-1510915933:324530..325230Clytia hemisphaericaexon
TCONS_00017548-exon-sc0000269-1491911889:338268..338556TCONS_00017548-exon-sc0000269-1491911889:338268..338556Clytia hemisphaericaexon
TCONS_00017548-exon-sc0000269-1491911889:336697..336920TCONS_00017548-exon-sc0000269-1491911889:336697..336920Clytia hemisphaericaexon
TCONS_00017548-exon-sc0000269-1491911889:335556..336364TCONS_00017548-exon-sc0000269-1491911889:335556..336364Clytia hemisphaericaexon
TCONS_00017548-exon-sc0000269-1491911889:334545..334659TCONS_00017548-exon-sc0000269-1491911889:334545..334659Clytia hemisphaericaexon
TCONS_00017548-exon-sc0000269-1491911889:333657..334049TCONS_00017548-exon-sc0000269-1491911889:333657..334049Clytia hemisphaericaexon
TCONS_00017548-exon-sc0000269-1491911889:333221..333324TCONS_00017548-exon-sc0000269-1491911889:333221..333324Clytia hemisphaericaexon
TCONS_00017548-exon-sc0000269-1491911889:327323..327617TCONS_00017548-exon-sc0000269-1491911889:327323..327617Clytia hemisphaericaexon
TCONS_00017548-exon-sc0000269-1491911889:326966..327041TCONS_00017548-exon-sc0000269-1491911889:326966..327041Clytia hemisphaericaexon
TCONS_00017548-exon-sc0000269-1491911889:326391..326487TCONS_00017548-exon-sc0000269-1491911889:326391..326487Clytia hemisphaericaexon
TCONS_00017548-exon-sc0000269-1491911889:326231..326264TCONS_00017548-exon-sc0000269-1491911889:326231..326264Clytia hemisphaericaexon
TCONS_00017548-exon-sc0000269-1491911889:325856..325941TCONS_00017548-exon-sc0000269-1491911889:325856..325941Clytia hemisphaericaexon
TCONS_00017548-exon-sc0000269-1491911889:324530..325230TCONS_00017548-exon-sc0000269-1491911889:324530..325230Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000269supercontigsc0000269:324530..338556 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.87386e-10	0.00198075	0	0.0995684	0.371949	0.366463	2.11544	2.57803	1.59577	1.86599	1.92534	2.22321	7.47044	7.52006	5.19963	8.96728	0.864616	1.40483	4.62746	4.08214	2.28782	2.29394	4.13704	3.5587	8.23523	8.4055	2.84881	3.2092	6.74002	5.45086
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017548 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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